RNA–Protein interactions for RNA: ENST00000485994.5

VPS50-218, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-218ENST00000485994 KCNJ2P63252 427 aa6.41□□□□□ -1.38
VPS50-218ENST00000485994 MRPS22P82650 360 aaKnown RBP6.41□□□□□ -1.38
VPS50-218ENST00000485994 HSF1Q00613 529 aa6.41□□□□□ -1.38
VPS50-218ENST00000485994 BTKQ06187 659 aa6.41□□□□□ -1.38
VPS50-218ENST00000485994 IFFO1Q0D2I5 559 aa6.41□□□□□ -1.38
VPS50-218ENST00000485994 PDE7AQ13946 482 aa6.41□□□□□ -1.38
VPS50-218ENST00000485994 EFR3AQ14156 821 aa6.41□□□□□ -1.38
VPS50-218ENST00000485994 MLC1Q15049 377 aa6.41□□□□□ -1.38
VPS50-218ENST00000485994 ERCC6LQ2NKX8 1250 aa6.41□□□□□ -1.38
VPS50-218ENST00000485994 SMU1Q2TAY7 513 aa6.41□□□□□ -1.38
VPS50-218ENST00000485994 CYP27C1Q4G0S4 372 aa6.41□□□□□ -1.38
VPS50-218ENST00000485994 CT45A2Q5DJT8 189 aa6.41□□□□□ -1.38
VPS50-218ENST00000485994 ARL13AQ5H913 290 aaPredicted RBP6.41□□□□□ -1.38
VPS50-218ENST00000485994 WLSQ5T9L3 541 aa6.41□□□□□ -1.38
VPS50-218ENST00000485994 TIGD3Q6B0B8 471 aa6.41□□□□□ -1.38
VPS50-218ENST00000485994 HIST2H2BCQ6DN03 193 aa6.41□□□□□ -1.38
VPS50-218ENST00000485994 VASNQ6EMK4 673 aa6.41□□□□□ -1.38
VPS50-218ENST00000485994 SCIMPQ6UWF3 145 aa6.41□□□□□ -1.38
VPS50-218ENST00000485994 LRIG3Q6UXM1 1119 aa6.41□□□□□ -1.38
VPS50-218ENST00000485994 CD163Q86VB7 1156 aa6.41□□□□□ -1.38
VPS50-218ENST00000485994 SRRM1Q8IYB3 904 aaKnown RBP6.41□□□□□ -1.38
VPS50-218ENST00000485994 FAM9CQ8IZT9 166 aa6.41□□□□□ -1.38
VPS50-218ENST00000485994 KIRREL3Q8IZU9 778 aa6.41□□□□□ -1.38
VPS50-218ENST00000485994 OR2L13Q8N349 312 aa6.41□□□□□ -1.38
VPS50-218ENST00000485994 NATD1Q8N6N6 113 aa6.41□□□□□ -1.38
VPS50-218ENST00000485994 FAM13CQ8NE31 585 aa6.41□□□□□ -1.38
VPS50-218ENST00000485994 ADCY4Q8NFM4 1077 aa6.41□□□□□ -1.38
VPS50-218ENST00000485994 DOK4Q8TEW6 326 aa6.41□□□□□ -1.38
VPS50-218ENST00000485994 SREK1Q8WXA9 508 aaKnown RBP6.41□□□□□ -1.38
VPS50-218ENST00000485994 NANOS1Q8WY41 292 aaKnown RBP6.41□□□□□ -1.38
VPS50-218ENST00000485994 RND1Q92730 232 aa6.41□□□□□ -1.38
VPS50-218ENST00000485994 TMCO6Q96DC7 493 aa6.41□□□□□ -1.38
VPS50-218ENST00000485994 ELP4Q96EB1 424 aa6.41□□□□□ -1.38
VPS50-218ENST00000485994 DTNBP1Q96EV8 351 aa6.41□□□□□ -1.38
VPS50-218ENST00000485994 ZNF597Q96LX8 424 aa6.41□□□□□ -1.38
VPS50-218ENST00000485994 RILPQ96NA2 401 aa6.41□□□□□ -1.38
VPS50-218ENST00000485994 COL21A1Q96P44 957 aa6.41□□□□□ -1.38
VPS50-218ENST00000485994 BBS4Q96RK4 519 aa6.41□□□□□ -1.38
VPS50-218ENST00000485994 SMC6Q96SB8 1091 aa6.41□□□□□ -1.38
VPS50-218ENST00000485994 DOHHQ9BU89 302 aa6.41□□□□□ -1.38
VPS50-218ENST00000485994 ITPAQ9BY32 194 aa6.41□□□□□ -1.38
VPS50-218ENST00000485994 KRTAP9-2Q9BYQ4 174 aa6.41□□□□□ -1.38
VPS50-218ENST00000485994 IQCGQ9H095 443 aaKnown RBP6.41□□□□□ -1.38
VPS50-218ENST00000485994 C12orf65Q9H3J6 166 aaKnown RBP6.41□□□□□ -1.38
VPS50-218ENST00000485994 TUBB1Q9H4B7 451 aa6.41□□□□□ -1.38
VPS50-218ENST00000485994 GLIPR2Q9H4G4 154 aa6.41□□□□□ -1.38
VPS50-218ENST00000485994 LDAHQ9H6V9 325 aa6.41□□□□□ -1.38
VPS50-218ENST00000485994 ZNF703Q9H7S9 590 aaPredicted RBP6.41□□□□□ -1.38
VPS50-218ENST00000485994 LRTM1Q9HBL6 345 aa6.41□□□□□ -1.38
VPS50-218ENST00000485994 HHATLQ9HCP6 504 aa6.41□□□□□ -1.38
VPS50-218ENST00000485994 PFDN4Q9NQP4 134 aa6.41□□□□□ -1.38
VPS50-218ENST00000485994 ACSS1Q9NUB1 689 aaPredicted RBP6.41□□□□□ -1.38
VPS50-218ENST00000485994 B4GALT7Q9UBV7 327 aa6.41□□□□□ -1.38
VPS50-218ENST00000485994 DTX4Q9Y2E6 619 aa6.41□□□□□ -1.38
VPS50-218ENST00000485994 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.41□□□□□ -1.38
VPS50-218ENST00000485994 MED12LQ86YW9 2145 aa6.41□□□□□ -1.38
VPS50-218ENST00000485994 DOCK7Q96N67 2140 aa6.41□□□□□ -1.38
VPS50-218ENST00000485994 DCHS2Q6V1P9 2916 aa6.41□□□□□ -1.38
VPS50-218ENST00000485994 LRBAP50851 2863 aa6.4□□□□□ -1.38
VPS50-218ENST00000485994 KRTAP9-6A0A140TA67 174 aa6.4□□□□□ -1.38
VPS50-218ENST00000485994 ATP6AP2A0A1C7CYW4 349 aa6.4□□□□□ -1.38
VPS50-218ENST00000485994 SMIM23A6NLE4 172 aa6.4□□□□□ -1.38
VPS50-218ENST00000485994 G3V3Y1 287 aa6.4□□□□□ -1.38
VPS50-218ENST00000485994 UPK1AO00322 258 aa6.4□□□□□ -1.38
VPS50-218ENST00000485994 LSM1O15116 133 aaKnown RBP6.4□□□□□ -1.38
VPS50-218ENST00000485994 TM9SF1O15321 606 aa6.4□□□□□ -1.38
VPS50-218ENST00000485994 BIRC5O15392 142 aa6.4□□□□□ -1.38
VPS50-218ENST00000485994 COQ9O75208 318 aa6.4□□□□□ -1.38
VPS50-218ENST00000485994 ERN1O75460 977 aaKnown RBP6.4□□□□□ -1.38
VPS50-218ENST00000485994 CRCPO75575 148 aa6.4□□□□□ -1.38
VPS50-218ENST00000485994 ATP6AP2O75787 350 aa6.4□□□□□ -1.38
VPS50-218ENST00000485994 EPPINO95925 133 aa6.4□□□□□ -1.38
VPS50-218ENST00000485994 BPGMP07738 259 aa6.4□□□□□ -1.38
VPS50-218ENST00000485994 PRPS2P11908 318 aa6.4□□□□□ -1.38
VPS50-218ENST00000485994 CPN1P15169 458 aa6.4□□□□□ -1.38
VPS50-218ENST00000485994 DDX5P17844 614 aaKnown RBP6.4□□□□□ -1.38
VPS50-218ENST00000485994 IGFBP2P18065 325 aa6.4□□□□□ -1.38
VPS50-218ENST00000485994 ENDOUP21128 410 aaKnown RBP6.4□□□□□ -1.38
VPS50-218ENST00000485994 ACVR2AP27037 513 aa6.4□□□□□ -1.38
VPS50-218ENST00000485994 PTPN6P29350 595 aa6.4□□□□□ -1.38
VPS50-218ENST00000485994 LCN1P31025 176 aa6.4□□□□□ -1.38
VPS50-218ENST00000485994 TIMP3P35625 211 aa6.4□□□□□ -1.38
VPS50-218ENST00000485994 KIR3DL1P43629 444 aa6.4□□□□□ -1.38
VPS50-218ENST00000485994 CDK9P50750 372 aaKnown RBP6.4□□□□□ -1.38
VPS50-218ENST00000485994 MRPS35P82673 323 aaKnown RBP6.4□□□□□ -1.38
VPS50-218ENST00000485994 PSG6Q00889 435 aa6.4□□□□□ -1.38
VPS50-218ENST00000485994 EXOSC7Q15024 291 aaKnown RBP6.4□□□□□ -1.38
VPS50-218ENST00000485994 LTB4RQ15722 352 aa6.4□□□□□ -1.38
VPS50-218ENST00000485994 PRSS53Q2L4Q9 553 aa6.4□□□□□ -1.38
VPS50-218ENST00000485994 RFTN2Q52LD8 501 aaPredicted RBP6.4□□□□□ -1.38
VPS50-218ENST00000485994 XKR7Q5GH72 579 aa6.4□□□□□ -1.38
VPS50-218ENST00000485994 RIPPLY2Q5TAB7 128 aa6.4□□□□□ -1.38
VPS50-218ENST00000485994 PRAMEF20Q5VT98 475 aa6.4□□□□□ -1.38
VPS50-218ENST00000485994 KANK2Q63ZY3 851 aa6.4□□□□□ -1.38
VPS50-218ENST00000485994 CLEC6AQ6EIG7 209 aa6.4□□□□□ -1.38
VPS50-218ENST00000485994 RTL6Q6ICC9 239 aa6.4□□□□□ -1.38
VPS50-218ENST00000485994 ZCCHC12Q6PEW1 402 aa6.4□□□□□ -1.38
VPS50-218ENST00000485994 TMEM64Q6YI46 380 aa6.4□□□□□ -1.38
VPS50-218ENST00000485994 B3GNT6Q6ZMB0 384 aa6.4□□□□□ -1.38
VPS50-218ENST00000485994 R3HCC1LQ7Z5L2 792 aaKnown RBP6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms