RNA–Protein interactions for RNA: ENST00000485102.1

HDAC6-227, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-227ENST00000485102 PRAMEF25A6NGN4 478 aa11.8□□□□□ -0.52
HDAC6-227ENST00000485102 LRRC14BA6NHZ5 514 aa11.8□□□□□ -0.52
HDAC6-227ENST00000485102 DEFB108AA8MXU0 73 aa11.8□□□□□ -0.52
HDAC6-227ENST00000485102 H0Y3Z8 333 aa11.8□□□□□ -0.52
HDAC6-227ENST00000485102 PLOD2O00469 737 aa11.8□□□□□ -0.52
HDAC6-227ENST00000485102 OR7A17O14581 309 aa11.8□□□□□ -0.52
HDAC6-227ENST00000485102 SMPD2O60906 423 aa11.8□□□□□ -0.52
HDAC6-227ENST00000485102 KLHL2O95198 593 aa11.8□□□□□ -0.52
HDAC6-227ENST00000485102 CBX7O95931 251 aa11.8□□□□□ -0.52
HDAC6-227ENST00000485102 KLK1P06870 262 aa11.8□□□□□ -0.52
HDAC6-227ENST00000485102 CSNK2A2P19784 350 aaPredicted RBP11.8□□□□□ -0.52
HDAC6-227ENST00000485102 FPR1P21462 350 aa11.8□□□□□ -0.52
HDAC6-227ENST00000485102 EMDP50402 254 aa11.8□□□□□ -0.52
HDAC6-227ENST00000485102 CLDN18P56856 261 aa11.8□□□□□ -0.52
HDAC6-227ENST00000485102 PSPHP78330 225 aa11.8□□□□□ -0.52
HDAC6-227ENST00000485102 HMGCS1Q01581 520 aa11.8□□□□□ -0.52
HDAC6-227ENST00000485102 PLCXD2Q0VAA5 305 aa11.8□□□□□ -0.52
HDAC6-227ENST00000485102 POU4F3Q15319 338 aa11.8□□□□□ -0.52
HDAC6-227ENST00000485102 GGTA1PQ4G0N0 100 aa11.8□□□□□ -0.52
HDAC6-227ENST00000485102 Q5PR19 223 aa11.8□□□□□ -0.52
HDAC6-227ENST00000485102 CCNYL2Q5T2Q4 361 aa11.8□□□□□ -0.52
HDAC6-227ENST00000485102 DESI1Q6ICB0 168 aa11.8□□□□□ -0.52
HDAC6-227ENST00000485102 OR2A2Q6IF42 318 aa11.8□□□□□ -0.52
HDAC6-227ENST00000485102 FAM111BQ6SJ93 734 aa11.8□□□□□ -0.52
HDAC6-227ENST00000485102 LCA5Q86VQ0 697 aa11.8□□□□□ -0.52
HDAC6-227ENST00000485102 PRIMA1Q86XR5 153 aa11.8□□□□□ -0.52
HDAC6-227ENST00000485102 P3H2Q8IVL5 708 aa11.8□□□□□ -0.52
HDAC6-227ENST00000485102 LRRN4CLQ8ND94 238 aa11.8□□□□□ -0.52
HDAC6-227ENST00000485102 SIMC1Q8NDZ2 872 aa11.8□□□□□ -0.52
HDAC6-227ENST00000485102 OR14L1PQ8NHC6 308 aa11.8□□□□□ -0.52
HDAC6-227ENST00000485102 AENQ8WTP8 325 aaKnown RBP11.8□□□□□ -0.52
HDAC6-227ENST00000485102 NUDT8Q8WV74 236 aa11.8□□□□□ -0.52
HDAC6-227ENST00000485102 TMCO6Q96DC7 493 aa11.8□□□□□ -0.52
HDAC6-227ENST00000485102 ERP27Q96DN0 273 aa11.8□□□□□ -0.52
HDAC6-227ENST00000485102 SLC35A4Q96G79 324 aa11.8□□□□□ -0.52
HDAC6-227ENST00000485102 ZNF681Q96N22 645 aa11.8□□□□□ -0.52
HDAC6-227ENST00000485102 BDH2Q9BUT1 245 aa11.8□□□□□ -0.52
HDAC6-227ENST00000485102 ITPAQ9BY32 194 aa11.8□□□□□ -0.52
HDAC6-227ENST00000485102 TXLNGYQ9BZA5 131 aa11.8□□□□□ -0.52
HDAC6-227ENST00000485102 ROPN1BQ9BZX4 212 aaPredicted RBP11.8□□□□□ -0.52
HDAC6-227ENST00000485102 NOL11Q9H8H0 719 aaKnown RBP11.8□□□□□ -0.52
HDAC6-227ENST00000485102 ROPN1Q9HAT0 212 aaPredicted RBP11.8□□□□□ -0.52
HDAC6-227ENST00000485102 GALNT9Q9HCQ5 603 aa11.8□□□□□ -0.52
HDAC6-227ENST00000485102 TAS2R10Q9NYW0 307 aa11.8□□□□□ -0.52
HDAC6-227ENST00000485102 KLRF1Q9NZS2 232 aa11.8□□□□□ -0.52
HDAC6-227ENST00000485102 GPR55Q9Y2T6 319 aaPredicted RBP11.8□□□□□ -0.52
HDAC6-227ENST00000485102 USF3Q68DE3 2245 aa11.8□□□□□ -0.52
HDAC6-227ENST00000485102 HEATR5AQ86XA9 2040 aa11.79□□□□□ -0.52
HDAC6-227ENST00000485102 A0A1W2PNV4 684 aa11.79□□□□□ -0.52
HDAC6-227ENST00000485102 FRG2CA6NGY1 282 aa11.79□□□□□ -0.52
HDAC6-227ENST00000485102 SIAH2O43255 324 aa11.79□□□□□ -0.52
HDAC6-227ENST00000485102 ZIC3O60481 467 aa11.79□□□□□ -0.52
HDAC6-227ENST00000485102 BCAS2O75934 225 aaPredicted RBP11.79□□□□□ -0.52
HDAC6-227ENST00000485102 SIX3O95343 332 aaPredicted RBP11.79□□□□□ -0.52
HDAC6-227ENST00000485102 CRYGSP22914 178 aa11.79□□□□□ -0.52
HDAC6-227ENST00000485102 MAPK12P53778 367 aa11.79□□□□□ -0.52
HDAC6-227ENST00000485102 IRF9Q00978 393 aa11.79□□□□□ -0.52
HDAC6-227ENST00000485102 SRYQ05066 204 aa11.79□□□□□ -0.52
HDAC6-227ENST00000485102 IFFO1Q0D2I5 559 aa11.79□□□□□ -0.52
HDAC6-227ENST00000485102 ACKR1Q16570 336 aa11.79□□□□□ -0.52
HDAC6-227ENST00000485102 KLC3Q6P597 504 aa11.79□□□□□ -0.52
HDAC6-227ENST00000485102 OR52B6Q8NGF0 335 aa11.79□□□□□ -0.52
HDAC6-227ENST00000485102 ZNF675Q8TD23 568 aa11.79□□□□□ -0.52
HDAC6-227ENST00000485102 TM4SF18Q96CE8 201 aa11.79□□□□□ -0.52
HDAC6-227ENST00000485102 STARD4Q96DR4 205 aa11.79□□□□□ -0.52
HDAC6-227ENST00000485102 WFIKKN1Q96NZ8 548 aa11.79□□□□□ -0.52
HDAC6-227ENST00000485102 MRPL1Q9BYD6 325 aaKnown RBP11.79□□□□□ -0.52
HDAC6-227ENST00000485102 ZBTB26Q9HCK0 441 aa11.79□□□□□ -0.52
HDAC6-227ENST00000485102 ELOVL5Q9NYP7 299 aa11.79□□□□□ -0.52
HDAC6-227ENST00000485102 ZNF226Q9NYT6 803 aa11.79□□□□□ -0.52
HDAC6-227ENST00000485102 BCAP29Q9UHQ4 241 aa11.79□□□□□ -0.52
HDAC6-227ENST00000485102 TMCO1Q9UM00 188 aa11.79□□□□□ -0.52
HDAC6-227ENST00000485102 MAPRE3Q9UPY8 281 aa11.79□□□□□ -0.52
HDAC6-227ENST00000485102 PLLPQ9Y342 182 aa11.79□□□□□ -0.52
HDAC6-227ENST00000485102 RAI1Q7Z5J4 1906 aaPredicted RBP11.78□□□□□ -0.52
HDAC6-227ENST00000485102 A0A096LPK6 155 aa11.78□□□□□ -0.52
HDAC6-227ENST00000485102 C2orf72A6NCS6 295 aa11.78□□□□□ -0.52
HDAC6-227ENST00000485102 STX16-NPEPL1H3BU86 382 aa11.78□□□□□ -0.52
HDAC6-227ENST00000485102 STX16O14662 325 aa11.78□□□□□ -0.52
HDAC6-227ENST00000485102 TSPAN2O60636 221 aa11.78□□□□□ -0.52
HDAC6-227ENST00000485102 TGM6O95932 706 aa11.78□□□□□ -0.52
HDAC6-227ENST00000485102 NUDT17P0C025 328 aa11.78□□□□□ -0.52
HDAC6-227ENST00000485102 CT45A8P0DMV1 189 aa11.78□□□□□ -0.52
HDAC6-227ENST00000485102 CT45A9P0DMV2 189 aa11.78□□□□□ -0.52
HDAC6-227ENST00000485102 CD79BP40259 229 aa11.78□□□□□ -0.52
HDAC6-227ENST00000485102 STARP49675 285 aa11.78□□□□□ -0.52
HDAC6-227ENST00000485102 CCNG1P51959 295 aa11.78□□□□□ -0.52
HDAC6-227ENST00000485102 TRA2BP62995 288 aaKnown RBP11.78□□□□□ -0.52
HDAC6-227ENST00000485102 OCRLQ01968 901 aa11.78□□□□□ -0.52
HDAC6-227ENST00000485102 FAM27E3Q08E93 113 aa11.78□□□□□ -0.52
HDAC6-227ENST00000485102 TRAF3Q13114 568 aa11.78□□□□□ -0.52
HDAC6-227ENST00000485102 SLC29A2Q14542 456 aa11.78□□□□□ -0.52
HDAC6-227ENST00000485102 EXOSC7Q15024 291 aaKnown RBP11.78□□□□□ -0.52
HDAC6-227ENST00000485102 CT45A2Q5DJT8 189 aa11.78□□□□□ -0.52
HDAC6-227ENST00000485102 TECRLQ5HYJ1 363 aa11.78□□□□□ -0.52
HDAC6-227ENST00000485102 MROH9Q5TGP6 573 aa11.78□□□□□ -0.52
HDAC6-227ENST00000485102 C20orf204Q6ZNR8 217 aa11.78□□□□□ -0.52
HDAC6-227ENST00000485102 COMMD6Q7Z4G1 85 aa11.78□□□□□ -0.52
HDAC6-227ENST00000485102 TDRPQ86YL5 185 aa11.78□□□□□ -0.52
HDAC6-227ENST00000485102 GRAMD2AQ8IUY3 354 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms