RNA–Protein interactions for RNA: ENST00000484799.1

SMC4-215, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 478 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-215ENST00000484799 LAMP5Q9UJQ1 280 aa3.08□□□□□ -1.92
SMC4-215ENST00000484799 IKZF3Q9UKT9 509 aa3.08□□□□□ -1.92
SMC4-215ENST00000484799 MRPS7Q9Y2R9 242 aaKnown RBP3.08□□□□□ -1.92
SMC4-215ENST00000484799 MRPL11Q9Y3B7 192 aaKnown RBP3.08□□□□□ -1.92
SMC4-215ENST00000484799 CPQQ9Y646 472 aa3.08□□□□□ -1.92
SMC4-215ENST00000484799 IKBKGQ9Y6K9 419 aa3.08□□□□□ -1.92
SMC4-215ENST00000484799 HCFC1P51610 2035 aa3.08□□□□□ -1.92
SMC4-215ENST00000484799 FAM168BA1KXE4 195 aa3.07□□□□□ -1.92
SMC4-215ENST00000484799 IGLON5A6NGN9 336 aa3.07□□□□□ -1.92
SMC4-215ENST00000484799 PDXKO00764 312 aa3.07□□□□□ -1.92
SMC4-215ENST00000484799 CHADO15335 359 aa3.07□□□□□ -1.92
SMC4-215ENST00000484799 CFLARO15519 480 aa3.07□□□□□ -1.92
SMC4-215ENST00000484799 B4GAT1O43505 415 aa3.07□□□□□ -1.92
SMC4-215ENST00000484799 THRBP10828 461 aa3.07□□□□□ -1.92
SMC4-215ENST00000484799 UMPSP11172 480 aa3.07□□□□□ -1.92
SMC4-215ENST00000484799 KRT13P13646 458 aa3.07□□□□□ -1.92
SMC4-215ENST00000484799 CYP2F1P24903 491 aa3.07□□□□□ -1.92
SMC4-215ENST00000484799 PTPN6P29350 595 aa3.07□□□□□ -1.92
SMC4-215ENST00000484799 NPY2RP49146 381 aa3.07□□□□□ -1.92
SMC4-215ENST00000484799 IGLV3-21P80748 117 aaPredicted RBP3.07□□□□□ -1.92
SMC4-215ENST00000484799 ELP6Q0PNE2 266 aa3.07□□□□□ -1.92
SMC4-215ENST00000484799 OVGP1Q12889 678 aa3.07□□□□□ -1.92
SMC4-215ENST00000484799 P2RY14Q15391 338 aa3.07□□□□□ -1.92
SMC4-215ENST00000484799 ACSF3Q4G176 576 aaPredicted RBP3.07□□□□□ -1.92
SMC4-215ENST00000484799 Q6ZRG5 221 aa3.07□□□□□ -1.92
SMC4-215ENST00000484799 GPR142Q7Z601 462 aa3.07□□□□□ -1.92
SMC4-215ENST00000484799 TBC1D10CQ8IV04 446 aa3.07□□□□□ -1.92
SMC4-215ENST00000484799 TBC1D21Q8IYX1 336 aa3.07□□□□□ -1.92
SMC4-215ENST00000484799 LINC00518Q8N0U6 118 aa3.07□□□□□ -1.92
SMC4-215ENST00000484799 ICA1LQ8NDH6 482 aa3.07□□□□□ -1.92
SMC4-215ENST00000484799 MRAPQ8TCY5 172 aa3.07□□□□□ -1.92
SMC4-215ENST00000484799 PCNPQ8WW12 178 aaKnown RBP3.07□□□□□ -1.92
SMC4-215ENST00000484799 BADQ92934 168 aa3.07□□□□□ -1.92
SMC4-215ENST00000484799 RAB7BQ96AH8 199 aa3.07□□□□□ -1.92
SMC4-215ENST00000484799 DTNBP1Q96EV8 351 aa3.07□□□□□ -1.92
SMC4-215ENST00000484799 PCED1BQ96HM7 432 aa3.07□□□□□ -1.92
SMC4-215ENST00000484799 ACTR8Q9H981 624 aa3.07□□□□□ -1.92
SMC4-215ENST00000484799 POLD4Q9HCU8 107 aa3.07□□□□□ -1.92
SMC4-215ENST00000484799 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP3.07□□□□□ -1.92
SMC4-215ENST00000484799 ANAPC11Q9NYG5 84 aa3.07□□□□□ -1.92
SMC4-215ENST00000484799 THYN1Q9P016 225 aa3.07□□□□□ -1.92
SMC4-215ENST00000484799 MIOXQ9UGB7 285 aa3.07□□□□□ -1.92
SMC4-215ENST00000484799 MFHAS1Q9Y4C4 1052 aa3.07□□□□□ -1.92
SMC4-215ENST00000484799 ATG4BQ9Y4P1 393 aa3.07□□□□□ -1.92
SMC4-215ENST00000484799 ABCC4O15439 1325 aa3.07□□□□□ -1.92
SMC4-215ENST00000484799 OBSCNQ5VST9 7968 aa3.06□□□□□ -1.92
SMC4-215ENST00000484799 IGHV3-16A0A0C4DH30 117 aa3.06□□□□□ -1.92
SMC4-215ENST00000484799 TMCO5BA8MYB1 307 aa3.06□□□□□ -1.92
SMC4-215ENST00000484799 H3BTX0 84 aa3.06□□□□□ -1.92
SMC4-215ENST00000484799 MCF2LO15068 1137 aa3.06□□□□□ -1.92
SMC4-215ENST00000484799 CSO75390 466 aaKnown RBP3.06□□□□□ -1.92
SMC4-215ENST00000484799 ANXA9O76027 345 aa3.06□□□□□ -1.92
SMC4-215ENST00000484799 RHOBTB1O94844 696 aa3.06□□□□□ -1.92
SMC4-215ENST00000484799 APBB3O95704 486 aa3.06□□□□□ -1.92
SMC4-215ENST00000484799 PCCBP05166 539 aa3.06□□□□□ -1.92
SMC4-215ENST00000484799 OTX2P32243 289 aa3.06□□□□□ -1.92
SMC4-215ENST00000484799 IFNAR2P48551 515 aa3.06□□□□□ -1.92
SMC4-215ENST00000484799 GSK3BP49841 420 aa3.06□□□□□ -1.92
SMC4-215ENST00000484799 PRELPP51888 382 aa3.06□□□□□ -1.92
SMC4-215ENST00000484799 NAPAP54920 295 aa3.06□□□□□ -1.92
SMC4-215ENST00000484799 PEX3P56589 373 aa3.06□□□□□ -1.92
SMC4-215ENST00000484799 GSTO1P78417 241 aa3.06□□□□□ -1.92
SMC4-215ENST00000484799 NOTCH2Q04721 2471 aa3.06□□□□□ -1.92
SMC4-215ENST00000484799 RBBP4Q09028 425 aa3.06□□□□□ -1.92
SMC4-215ENST00000484799 FUT7Q11130 342 aa3.06□□□□□ -1.92
SMC4-215ENST00000484799 EIF4EBP2Q13542 120 aaPredicted RBP3.06□□□□□ -1.92
SMC4-215ENST00000484799 KLF5Q13887 457 aaPredicted RBP3.06□□□□□ -1.92
SMC4-215ENST00000484799 CRMP1Q14194 572 aa3.06□□□□□ -1.92
SMC4-215ENST00000484799 CLPPQ16740 277 aaPredicted RBP3.06□□□□□ -1.92
SMC4-215ENST00000484799 KIF7Q2M1P5 1343 aa3.06□□□□□ -1.92
SMC4-215ENST00000484799 PARP6Q2NL67 630 aa3.06□□□□□ -1.92
SMC4-215ENST00000484799 ZNF528Q3MIS6 628 aa3.06□□□□□ -1.92
SMC4-215ENST00000484799 DCAF4L1Q3SXM0 396 aa3.06□□□□□ -1.92
SMC4-215ENST00000484799 POM121L1PQ3SYA9 428 aa3.06□□□□□ -1.92
SMC4-215ENST00000484799 TIMM50Q3ZCQ8 353 aa3.06□□□□□ -1.92
SMC4-215ENST00000484799 SLC22A6Q4U2R8 563 aa3.06□□□□□ -1.92
SMC4-215ENST00000484799 LRRC23Q53EV4 343 aaPredicted RBP3.06□□□□□ -1.92
SMC4-215ENST00000484799 NHLRC3Q5JS37 347 aa3.06□□□□□ -1.92
SMC4-215ENST00000484799 LIPKQ5VXJ0 399 aa3.06□□□□□ -1.92
SMC4-215ENST00000484799 RHBDD2Q6NTF9 364 aa3.06□□□□□ -1.92
SMC4-215ENST00000484799 ZNF730Q6ZMV8 503 aa3.06□□□□□ -1.92
SMC4-215ENST00000484799 DPY19L2P2Q6ZN68 376 aa3.06□□□□□ -1.92
SMC4-215ENST00000484799 PAQR9Q6ZVX9 377 aa3.06□□□□□ -1.92
SMC4-215ENST00000484799 TMEM110Q86TL2 294 aa3.06□□□□□ -1.92
SMC4-215ENST00000484799 ITIH5Q86UX2 942 aa3.06□□□□□ -1.92
SMC4-215ENST00000484799 GPBP1Q86WP2 473 aa3.06□□□□□ -1.92
SMC4-215ENST00000484799 FADS6Q8N9I5 356 aa3.06□□□□□ -1.92
SMC4-215ENST00000484799 IPMKQ8NFU5 416 aa3.06□□□□□ -1.92
SMC4-215ENST00000484799 OR1B1Q8NGR6 318 aa3.06□□□□□ -1.92
SMC4-215ENST00000484799 FBXO25Q8TCJ0 367 aa3.06□□□□□ -1.92
SMC4-215ENST00000484799 LIPHQ8WWY8 451 aa3.06□□□□□ -1.92
SMC4-215ENST00000484799 MRPL24Q96A35 216 aaKnown RBP3.06□□□□□ -1.92
SMC4-215ENST00000484799 CCDC51Q96ER9 411 aa3.06□□□□□ -1.92
SMC4-215ENST00000484799 RBM18Q96H35 190 aaKnown RBP3.06□□□□□ -1.92
SMC4-215ENST00000484799 COG3Q96JB2 828 aa3.06□□□□□ -1.92
SMC4-215ENST00000484799 CAPNS2Q96L46 248 aa3.06□□□□□ -1.92
SMC4-215ENST00000484799 DEFB118Q96PH6 123 aa3.06□□□□□ -1.92
SMC4-215ENST00000484799 ACCSQ96QU6 501 aa3.06□□□□□ -1.92
SMC4-215ENST00000484799 TSPAN18Q96SJ8 248 aa3.06□□□□□ -1.92
SMC4-215ENST00000484799 C19orf43Q9BQ61 176 aa3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms