RNA–Protein interactions for RNA: ENST00000483925.1

PTCD3-214, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 576 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-214ENST00000483925 MAPKAPK5-AS1Q8N8E1 139 aa3.96□□□□□ -1.78
PTCD3-214ENST00000483925 Q8N9G6 341 aaPredicted RBP3.96□□□□□ -1.78
PTCD3-214ENST00000483925 ADAD2Q8NCV1 583 aaKnown RBP3.96□□□□□ -1.78
PTCD3-214ENST00000483925 STXBP6Q8NFX7 210 aa3.96□□□□□ -1.78
PTCD3-214ENST00000483925 OR1L4Q8NGR5 311 aa3.96□□□□□ -1.78
PTCD3-214ENST00000483925 SLC38A4Q969I6 547 aa3.96□□□□□ -1.78
PTCD3-214ENST00000483925 PNPLA2Q96AD5 504 aa3.96□□□□□ -1.78
PTCD3-214ENST00000483925 CIDECQ96AQ7 238 aaPredicted RBP3.96□□□□□ -1.78
PTCD3-214ENST00000483925 SCRN2Q96FV2 425 aa3.96□□□□□ -1.78
PTCD3-214ENST00000483925 MSANTD3Q96H12 275 aa3.96□□□□□ -1.78
PTCD3-214ENST00000483925 PCED1BQ96HM7 432 aa3.96□□□□□ -1.78
PTCD3-214ENST00000483925 URB1-AS1Q96HZ7 61 aa3.96□□□□□ -1.78
PTCD3-214ENST00000483925 ZBED3Q96IU2 234 aaPredicted RBP3.96□□□□□ -1.78
PTCD3-214ENST00000483925 ELMO2Q96JJ3 720 aa3.96□□□□□ -1.78
PTCD3-214ENST00000483925 LMLNQ96KR4 655 aa3.96□□□□□ -1.78
PTCD3-214ENST00000483925 NSMCE3Q96MG7 304 aa3.96□□□□□ -1.78
PTCD3-214ENST00000483925 AMDHD1Q96NU7 426 aa3.96□□□□□ -1.78
PTCD3-214ENST00000483925 CCT8L2Q96SF2 557 aa3.96□□□□□ -1.78
PTCD3-214ENST00000483925 COPS8Q99627 209 aa3.96□□□□□ -1.78
PTCD3-214ENST00000483925 SLC30A2Q9BRI3 323 aa3.96□□□□□ -1.78
PTCD3-214ENST00000483925 DCTPP1Q9H773 170 aa3.96□□□□□ -1.78
PTCD3-214ENST00000483925 IL1RL2Q9HB29 575 aa3.96□□□□□ -1.78
PTCD3-214ENST00000483925 GPR83Q9NYM4 423 aa3.96□□□□□ -1.78
PTCD3-214ENST00000483925 GHRLQ9UBU3 117 aa3.96□□□□□ -1.78
PTCD3-214ENST00000483925 NPIPA1Q9UND3 350 aa3.96□□□□□ -1.78
PTCD3-214ENST00000483925 ABCG2Q9UNQ0 655 aa3.96□□□□□ -1.78
PTCD3-214ENST00000483925 SLC6A5Q9Y345 797 aa3.96□□□□□ -1.78
PTCD3-214ENST00000483925 MAD1L1Q9Y6D9 718 aa3.96□□□□□ -1.78
PTCD3-214ENST00000483925 BZW2Q9Y6E2 419 aaKnown RBP3.96□□□□□ -1.78
PTCD3-214ENST00000483925 LOC101059948A0A1B0GTJ6 334 aa3.95□□□□□ -1.78
PTCD3-214ENST00000483925 RPS10-NUDT3A0A1W2PQS6 291 aa3.95□□□□□ -1.78
PTCD3-214ENST00000483925 NKX6-3A6NJ46 265 aa3.95□□□□□ -1.78
PTCD3-214ENST00000483925 TCP10L2B9ZVM9 353 aa3.95□□□□□ -1.78
PTCD3-214ENST00000483925 POLR1CO15160 346 aaPredicted RBP3.95□□□□□ -1.78
PTCD3-214ENST00000483925 EPHB6O15197 1021 aa3.95□□□□□ -1.78
PTCD3-214ENST00000483925 BCAR3O75815 825 aa3.95□□□□□ -1.78
PTCD3-214ENST00000483925 GNA14O95837 355 aa3.95□□□□□ -1.78
PTCD3-214ENST00000483925 APOA1P02647 267 aa3.95□□□□□ -1.78
PTCD3-214ENST00000483925 OPN1LWP04000 364 aa3.95□□□□□ -1.78
PTCD3-214ENST00000483925 STAG3L2P0CL84 134 aa3.95□□□□□ -1.78
PTCD3-214ENST00000483925 SRMP19623 302 aa3.95□□□□□ -1.78
PTCD3-214ENST00000483925 CYP2B6P20813 491 aa3.95□□□□□ -1.78
PTCD3-214ENST00000483925 HOXD3P31249 432 aaPredicted RBP3.95□□□□□ -1.78
PTCD3-214ENST00000483925 NAMPTP43490 491 aa3.95□□□□□ -1.78
PTCD3-214ENST00000483925 RFX5P48382 616 aaPredicted RBP3.95□□□□□ -1.78
PTCD3-214ENST00000483925 CDH6P55285 790 aa3.95□□□□□ -1.78
PTCD3-214ENST00000483925 CDH11P55287 796 aa3.95□□□□□ -1.78
PTCD3-214ENST00000483925 IL9RQ01113 521 aa3.95□□□□□ -1.78
PTCD3-214ENST00000483925 POU3F1Q03052 451 aaPredicted RBP3.95□□□□□ -1.78
PTCD3-214ENST00000483925 PTGR1Q14914 329 aa3.95□□□□□ -1.78
PTCD3-214ENST00000483925 STK38Q15208 465 aa3.95□□□□□ -1.78
PTCD3-214ENST00000483925 C3AR1Q16581 482 aa3.95□□□□□ -1.78
PTCD3-214ENST00000483925 HAGHQ16775 308 aa3.95□□□□□ -1.78
PTCD3-214ENST00000483925 HNRNPA1L2Q32P51 320 aaKnown RBP3.95□□□□□ -1.78
PTCD3-214ENST00000483925 GGTA1PQ4G0N0 100 aa3.95□□□□□ -1.78
PTCD3-214ENST00000483925 PDPK2PQ6A1A2 396 aa3.95□□□□□ -1.78
PTCD3-214ENST00000483925 TMEM53Q6P2H8 277 aa3.95□□□□□ -1.78
PTCD3-214ENST00000483925 FAM171BQ6P995 826 aa3.95□□□□□ -1.78
PTCD3-214ENST00000483925 GFRALQ6UXV0 394 aa3.95□□□□□ -1.78
PTCD3-214ENST00000483925 ZNF562Q6V9R5 426 aa3.95□□□□□ -1.78
PTCD3-214ENST00000483925 ZNF66Q6ZN08 573 aa3.95□□□□□ -1.78
PTCD3-214ENST00000483925 FCRLAQ7L513 359 aa3.95□□□□□ -1.78
PTCD3-214ENST00000483925 KIAA1328Q86T90 577 aa3.95□□□□□ -1.78
PTCD3-214ENST00000483925 TMEM17Q86X19 198 aa3.95□□□□□ -1.78
PTCD3-214ENST00000483925 CACUL1Q86Y37 369 aa3.95□□□□□ -1.78
PTCD3-214ENST00000483925 PLD3Q8IV08 490 aa3.95□□□□□ -1.78
PTCD3-214ENST00000483925 CCDC50Q8IVM0 306 aa3.95□□□□□ -1.78
PTCD3-214ENST00000483925 NAGSQ8N159 534 aa3.95□□□□□ -1.78
PTCD3-214ENST00000483925 KCNH5Q8NCM2 988 aa3.95□□□□□ -1.78
PTCD3-214ENST00000483925 OR2T12Q8NG77 320 aa3.95□□□□□ -1.78
PTCD3-214ENST00000483925 OR51G2Q8NGK0 314 aa3.95□□□□□ -1.78
PTCD3-214ENST00000483925 OR13F1Q8NGS4 319 aa3.95□□□□□ -1.78
PTCD3-214ENST00000483925 C8orf46Q8TAG6 207 aa3.95□□□□□ -1.78
PTCD3-214ENST00000483925 NANPQ8TBE9 248 aa3.95□□□□□ -1.78
PTCD3-214ENST00000483925 CD99L2Q8TCZ2 262 aa3.95□□□□□ -1.78
PTCD3-214ENST00000483925 GPR148Q8TDV2 347 aa3.95□□□□□ -1.78
PTCD3-214ENST00000483925 GPX8Q8TED1 209 aa3.95□□□□□ -1.78
PTCD3-214ENST00000483925 PAQR8Q8TEZ7 354 aa3.95□□□□□ -1.78
PTCD3-214ENST00000483925 OR1E3Q8WZA6 343 aa3.95□□□□□ -1.78
PTCD3-214ENST00000483925 ST8SIA1Q92185 356 aa3.95□□□□□ -1.78
PTCD3-214ENST00000483925 SMPDL3AQ92484 453 aa3.95□□□□□ -1.78
PTCD3-214ENST00000483925 TMIGD2Q96BF3 282 aa3.95□□□□□ -1.78
PTCD3-214ENST00000483925 UPRTQ96BW1 309 aa3.95□□□□□ -1.78
PTCD3-214ENST00000483925 PANX2Q96RD6 677 aa3.95□□□□□ -1.78
PTCD3-214ENST00000483925 C20orf24Q9BUV8 137 aa3.95□□□□□ -1.78
PTCD3-214ENST00000483925 EGLN3Q9H6Z9 239 aa3.95□□□□□ -1.78
PTCD3-214ENST00000483925 SYNDIG1Q9H7V2 258 aa3.95□□□□□ -1.78
PTCD3-214ENST00000483925 MTHFD2LQ9H903 347 aaPredicted RBP3.95□□□□□ -1.78
PTCD3-214ENST00000483925 FKRPQ9H9S5 495 aa3.95□□□□□ -1.78
PTCD3-214ENST00000483925 POLE4Q9NR33 117 aa3.95□□□□□ -1.78
PTCD3-214ENST00000483925 STARD5Q9NSY2 213 aa3.95□□□□□ -1.78
PTCD3-214ENST00000483925 ZNF224Q9NZL3 707 aa3.95□□□□□ -1.78
PTCD3-214ENST00000483925 IKZF2Q9UKS7 526 aa3.95□□□□□ -1.78
PTCD3-214ENST00000483925 IKZF3Q9UKT9 509 aa3.95□□□□□ -1.78
PTCD3-214ENST00000483925 ELF5Q9UKW6 265 aaPredicted RBP3.95□□□□□ -1.78
PTCD3-214ENST00000483925 TBC1D24Q9ULP9 559 aa3.95□□□□□ -1.78
PTCD3-214ENST00000483925 FBLL1A6NHQ2 334 aaKnown RBP3.94□□□□□ -1.78
PTCD3-214ENST00000483925 SRRM4A7MD48 611 aaKnown RBP3.94□□□□□ -1.78
PTCD3-214ENST00000483925 GABRR3A8MPY1 467 aa3.94□□□□□ -1.78
PTCD3-214ENST00000483925 PSMD11O00231 422 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms