RNA–Protein interactions for RNA: ENST00000483847.1

SMARCC1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 804 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-205ENST00000483847 REM1O75628 298 aa9.75□□□□□ -0.85
SMARCC1-205ENST00000483847 CBX7O95931 251 aa9.75□□□□□ -0.85
SMARCC1-205ENST00000483847 PPP3CBP16298 524 aa9.75□□□□□ -0.85
SMARCC1-205ENST00000483847 PORP16435 677 aaPredicted RBP9.75□□□□□ -0.85
SMARCC1-205ENST00000483847 DRD5P21918 477 aa9.75□□□□□ -0.85
SMARCC1-205ENST00000483847 IVDP26440 423 aa9.75□□□□□ -0.85
SMARCC1-205ENST00000483847 NEK2P51955 445 aa9.75□□□□□ -0.85
SMARCC1-205ENST00000483847 GAS1P54826 345 aa9.75□□□□□ -0.85
SMARCC1-205ENST00000483847 ATP6V0D1P61421 351 aa9.75□□□□□ -0.85
SMARCC1-205ENST00000483847 POU4F1Q01851 419 aa9.75□□□□□ -0.85
SMARCC1-205ENST00000483847 DUSP2Q05923 314 aa9.75□□□□□ -0.85
SMARCC1-205ENST00000483847 ZNF844Q08AG5 666 aa9.75□□□□□ -0.85
SMARCC1-205ENST00000483847 FAPQ12884 760 aa9.75□□□□□ -0.85
SMARCC1-205ENST00000483847 CUL3Q13618 768 aa9.75□□□□□ -0.85
SMARCC1-205ENST00000483847 FRG1Q14331 258 aaKnown RBP9.75□□□□□ -0.85
SMARCC1-205ENST00000483847 FASTKD3Q14CZ7 662 aaKnown RBP9.75□□□□□ -0.85
SMARCC1-205ENST00000483847 C6orf163Q5TEZ5 329 aa9.75□□□□□ -0.85
SMARCC1-205ENST00000483847 ADAM5Q6NVV9 412 aa9.75□□□□□ -0.85
SMARCC1-205ENST00000483847 ATG4DQ86TL0 474 aaPredicted RBP9.75□□□□□ -0.85
SMARCC1-205ENST00000483847 PDIK1LQ8N165 341 aa9.75□□□□□ -0.85
SMARCC1-205ENST00000483847 TEX9Q8N6V9 391 aa9.75□□□□□ -0.85
SMARCC1-205ENST00000483847 TRIM58Q8NG06 486 aa9.75□□□□□ -0.85
SMARCC1-205ENST00000483847 GRK7Q8WTQ7 553 aa9.75□□□□□ -0.85
SMARCC1-205ENST00000483847 UBXN10Q96LJ8 280 aa9.75□□□□□ -0.85
SMARCC1-205ENST00000483847 COL21A1Q96P44 957 aa9.75□□□□□ -0.85
SMARCC1-205ENST00000483847 ADOQ96SZ5 270 aa9.75□□□□□ -0.85
SMARCC1-205ENST00000483847 ACTR6Q9GZN1 396 aa9.75□□□□□ -0.85
SMARCC1-205ENST00000483847 ALG9Q9H6U8 611 aa9.75□□□□□ -0.85
SMARCC1-205ENST00000483847 CDC42EP3Q9UKI2 254 aa9.75□□□□□ -0.85
SMARCC1-205ENST00000483847 CLEC4AQ9UMR7 237 aa9.75□□□□□ -0.85
SMARCC1-205ENST00000483847 TSC22D4Q9Y3Q8 395 aa9.75□□□□□ -0.85
SMARCC1-205ENST00000483847 ZNF175Q9Y473 711 aa9.75□□□□□ -0.85
SMARCC1-205ENST00000483847 IGHV4-30-2A0A087WSY4 118 aa9.74□□□□□ -0.85
SMARCC1-205ENST00000483847 UBXN8O00124 270 aa9.74□□□□□ -0.85
SMARCC1-205ENST00000483847 TO15178 435 aa9.74□□□□□ -0.85
SMARCC1-205ENST00000483847 CLOCKO15516 846 aa9.74□□□□□ -0.85
SMARCC1-205ENST00000483847 TSPAN2O60636 221 aa9.74□□□□□ -0.85
SMARCC1-205ENST00000483847 FEN1P39748 380 aaKnown RBP9.74□□□□□ -0.85
SMARCC1-205ENST00000483847 PPICP45877 212 aa9.74□□□□□ -0.85
SMARCC1-205ENST00000483847 SLC6A8P48029 635 aa9.74□□□□□ -0.85
SMARCC1-205ENST00000483847 PIK3CGP48736 1102 aa9.74□□□□□ -0.85
SMARCC1-205ENST00000483847 FNTAP49354 379 aa9.74□□□□□ -0.85
SMARCC1-205ENST00000483847 EMDP50402 254 aa9.74□□□□□ -0.85
SMARCC1-205ENST00000483847 CORO7P57737 925 aa9.74□□□□□ -0.85
SMARCC1-205ENST00000483847 GPX6P59796 221 aa9.74□□□□□ -0.85
SMARCC1-205ENST00000483847 MRPS35P82673 323 aaKnown RBP9.74□□□□□ -0.85
SMARCC1-205ENST00000483847 MAP4K2Q12851 820 aa9.74□□□□□ -0.85
SMARCC1-205ENST00000483847 DLG1Q12959 904 aa9.74□□□□□ -0.85
SMARCC1-205ENST00000483847 FGFBP1Q14512 234 aa9.74□□□□□ -0.85
SMARCC1-205ENST00000483847 LTB4RQ15722 352 aa9.74□□□□□ -0.85
SMARCC1-205ENST00000483847 CTU2Q2VPK5 515 aaKnown RBP9.74□□□□□ -0.85
SMARCC1-205ENST00000483847 TRMT12Q53H54 448 aaKnown RBP9.74□□□□□ -0.85
SMARCC1-205ENST00000483847 RAET1LQ5VY80 246 aa9.74□□□□□ -0.85
SMARCC1-205ENST00000483847 FAM180BQ6P0A1 224 aa9.74□□□□□ -0.85
SMARCC1-205ENST00000483847 MILR1Q7Z6M3 343 aa9.74□□□□□ -0.85
SMARCC1-205ENST00000483847 OR52R1Q8NGF1 315 aa9.74□□□□□ -0.85
SMARCC1-205ENST00000483847 SMAP2Q8WU79 429 aaPredicted RBP9.74□□□□□ -0.85
SMARCC1-205ENST00000483847 UBTD2Q8WUN7 234 aa9.74□□□□□ -0.85
SMARCC1-205ENST00000483847 RNF138Q8WVD3 245 aa9.74□□□□□ -0.85
SMARCC1-205ENST00000483847 FBXW5Q969U6 566 aa9.74□□□□□ -0.85
SMARCC1-205ENST00000483847 TMCO6Q96DC7 493 aa9.74□□□□□ -0.85
SMARCC1-205ENST00000483847 SLC35A4Q96G79 324 aa9.74□□□□□ -0.85
SMARCC1-205ENST00000483847 NTMT1Q9BV86 223 aa9.74□□□□□ -0.85
SMARCC1-205ENST00000483847 BEX2Q9BXY8 128 aa9.74□□□□□ -0.85
SMARCC1-205ENST00000483847 AMBRA1Q9C0C7 1298 aa9.74□□□□□ -0.85
SMARCC1-205ENST00000483847 DSN1Q9H410 356 aa9.74□□□□□ -0.85
SMARCC1-205ENST00000483847 ANKRA2Q9H9E1 313 aa9.74□□□□□ -0.85
SMARCC1-205ENST00000483847 PLSCR4Q9NRQ2 329 aa9.74□□□□□ -0.85
SMARCC1-205ENST00000483847 NUDT4Q9NZJ9 180 aa9.74□□□□□ -0.85
SMARCC1-205ENST00000483847 CES1P1Q9UKY3 287 aa9.74□□□□□ -0.85
SMARCC1-205ENST00000483847 CFL2Q9Y281 166 aa9.74□□□□□ -0.85
SMARCC1-205ENST00000483847 GPR55Q9Y2T6 319 aaPredicted RBP9.74□□□□□ -0.85
SMARCC1-205ENST00000483847 RNF115Q9Y4L5 304 aa9.74□□□□□ -0.85
SMARCC1-205ENST00000483847 PCDHGA11Q9Y5H2 935 aa9.74□□□□□ -0.85
SMARCC1-205ENST00000483847 YLPM1P49750 1951 aaKnown RBP9.74□□□□□ -0.85
SMARCC1-205ENST00000483847 PCNX3Q9H6A9 2034 aa9.73□□□□□ -0.85
SMARCC1-205ENST00000483847 OR2M5A3KFT3 312 aa9.73□□□□□ -0.85
SMARCC1-205ENST00000483847 CXorf49A8MYA2 514 aaPredicted RBP9.73□□□□□ -0.85
SMARCC1-205ENST00000483847 SUPT3HB4E1H0 165 aa9.73□□□□□ -0.85
SMARCC1-205ENST00000483847 H0YIV9 168 aa9.73□□□□□ -0.85
SMARCC1-205ENST00000483847 H3BML4 177 aa9.73□□□□□ -0.85
SMARCC1-205ENST00000483847 PGRMC1O00264 195 aaKnown RBP9.73□□□□□ -0.85
SMARCC1-205ENST00000483847 SSX4O60224 188 aa9.73□□□□□ -0.85
SMARCC1-205ENST00000483847 SUPT3HO75486 399 aa9.73□□□□□ -0.85
SMARCC1-205ENST00000483847 ATP1B1P05026 303 aa9.73□□□□□ -0.85
SMARCC1-205ENST00000483847 KLK1P06870 262 aa9.73□□□□□ -0.85
SMARCC1-205ENST00000483847 CT45A8P0DMV1 189 aa9.73□□□□□ -0.85
SMARCC1-205ENST00000483847 CT45A9P0DMV2 189 aa9.73□□□□□ -0.85
SMARCC1-205ENST00000483847 HK1P19367 917 aa9.73□□□□□ -0.85
SMARCC1-205ENST00000483847 DSCR4P56555 118 aaPredicted RBP9.73□□□□□ -0.85
SMARCC1-205ENST00000483847 EEFSECP57772 596 aaKnown RBP9.73□□□□□ -0.85
SMARCC1-205ENST00000483847 CPSF6Q16630 551 aaKnown RBP eCLIP9.73□□□□□ -0.85
SMARCC1-205ENST00000483847 TMEM249Q2WGJ8 235 aa9.73□□□□□ -0.85
SMARCC1-205ENST00000483847 PGGHGQ32M88 737 aa9.73□□□□□ -0.85
SMARCC1-205ENST00000483847 CT45A2Q5DJT8 189 aa9.73□□□□□ -0.85
SMARCC1-205ENST00000483847 ZNF662Q6ZS27 426 aa9.73□□□□□ -0.85
SMARCC1-205ENST00000483847 ISCA2Q86U28 154 aa9.73□□□□□ -0.85
SMARCC1-205ENST00000483847 ARIH2OSQ8N7S6 290 aa9.73□□□□□ -0.85
SMARCC1-205ENST00000483847 FADS6Q8N9I5 356 aa9.73□□□□□ -0.85
SMARCC1-205ENST00000483847 FBXO36Q8NEA4 188 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms