RNA–Protein interactions for RNA: ENST00000483407.1

CSDE1-207, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 741 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-207ENST00000483407 GOSR1O95249 250 aa5.38□□□□□ -1.55
CSDE1-207ENST00000483407 ETHE1O95571 254 aa5.38□□□□□ -1.55
CSDE1-207ENST00000483407 EPPINO95925 133 aa5.38□□□□□ -1.55
CSDE1-207ENST00000483407 TBX6O95947 436 aaPredicted RBP5.38□□□□□ -1.55
CSDE1-207ENST00000483407 RAF1P04049 648 aa5.38□□□□□ -1.55
CSDE1-207ENST00000483407 PCNAP12004 261 aa5.38□□□□□ -1.55
CSDE1-207ENST00000483407 JUNBP17275 347 aaPredicted RBP5.38□□□□□ -1.55
CSDE1-207ENST00000483407 ATP5A1P25705 553 aaKnown RBP5.38□□□□□ -1.55
CSDE1-207ENST00000483407 GDF1P27539 372 aa5.38□□□□□ -1.55
CSDE1-207ENST00000483407 SERPINB3P29508 390 aa5.38□□□□□ -1.55
CSDE1-207ENST00000483407 TIMP3P35625 211 aa5.38□□□□□ -1.55
CSDE1-207ENST00000483407 GGT5P36269 586 aa5.38□□□□□ -1.55
CSDE1-207ENST00000483407 BUD31P41223 144 aaPredicted RBP5.38□□□□□ -1.55
CSDE1-207ENST00000483407 SSR2P43308 183 aa5.38□□□□□ -1.55
CSDE1-207ENST00000483407 STT3AP46977 705 aa5.38□□□□□ -1.55
CSDE1-207ENST00000483407 HSPA7P48741 367 aa5.38□□□□□ -1.55
CSDE1-207ENST00000483407 RAP1GDS1P52306 607 aa5.38□□□□□ -1.55
CSDE1-207ENST00000483407 ATP6V0D1P61421 351 aa5.38□□□□□ -1.55
CSDE1-207ENST00000483407 ID2Q02363 134 aa5.38□□□□□ -1.55
CSDE1-207ENST00000483407 CHIT1Q13231 466 aa5.38□□□□□ -1.55
CSDE1-207ENST00000483407 SNTB1Q13884 538 aaKnown RBP5.38□□□□□ -1.55
CSDE1-207ENST00000483407 KEAP1Q14145 624 aa5.38□□□□□ -1.55
CSDE1-207ENST00000483407 DOC2AQ14183 400 aa5.38□□□□□ -1.55
CSDE1-207ENST00000483407 TBCCQ15814 346 aa5.38□□□□□ -1.55
CSDE1-207ENST00000483407 FBXL19-AS1Q494R0 122 aa5.38□□□□□ -1.55
CSDE1-207ENST00000483407 PRAMEF20Q5VT98 475 aa5.38□□□□□ -1.55
CSDE1-207ENST00000483407 TMEM198Q66K66 360 aa5.38□□□□□ -1.55
CSDE1-207ENST00000483407 MED27Q6P2C8 311 aa5.38□□□□□ -1.55
CSDE1-207ENST00000483407 PAMR1Q6UXH9 720 aa5.38□□□□□ -1.55
CSDE1-207ENST00000483407 ZNF793Q6ZN11 406 aa5.38□□□□□ -1.55
CSDE1-207ENST00000483407 SYDE1Q6ZW31 735 aaPredicted RBP5.38□□□□□ -1.55
CSDE1-207ENST00000483407 LRRC70Q7Z2Q7 622 aa5.38□□□□□ -1.55
CSDE1-207ENST00000483407 BIVMQ86UB2 503 aa5.38□□□□□ -1.55
CSDE1-207ENST00000483407 LACC1Q8IV20 430 aa5.38□□□□□ -1.55
CSDE1-207ENST00000483407 LRRC8AQ8IWT6 810 aa5.38□□□□□ -1.55
CSDE1-207ENST00000483407 C9orf40Q8IXQ3 194 aa5.38□□□□□ -1.55
CSDE1-207ENST00000483407 PM20D2Q8IYS1 436 aa5.38□□□□□ -1.55
CSDE1-207ENST00000483407 ULK2Q8IYT8 1036 aa5.38□□□□□ -1.55
CSDE1-207ENST00000483407 TAGAPQ8N103 731 aa5.38□□□□□ -1.55
CSDE1-207ENST00000483407 MMP21Q8N119 569 aa5.38□□□□□ -1.55
CSDE1-207ENST00000483407 ACOT4Q8N9L9 421 aa5.38□□□□□ -1.55
CSDE1-207ENST00000483407 RELL2Q8NC24 303 aaPredicted RBP5.38□□□□□ -1.55
CSDE1-207ENST00000483407 BBOF1Q8ND07 529 aa5.38□□□□□ -1.55
CSDE1-207ENST00000483407 FBXO36Q8NEA4 188 aa5.38□□□□□ -1.55
CSDE1-207ENST00000483407 PPP1R35Q8TAP8 253 aa5.38□□□□□ -1.55
CSDE1-207ENST00000483407 ANKRD49Q8WVL7 239 aa5.38□□□□□ -1.55
CSDE1-207ENST00000483407 FAM168AQ92567 244 aa5.38□□□□□ -1.55
CSDE1-207ENST00000483407 CDKL2Q92772 493 aa5.38□□□□□ -1.55
CSDE1-207ENST00000483407 TANKQ92844 425 aa5.38□□□□□ -1.55
CSDE1-207ENST00000483407 ANKRD9Q96BM1 317 aaPredicted RBP5.38□□□□□ -1.55
CSDE1-207ENST00000483407 WDR34Q96EX3 536 aa5.38□□□□□ -1.55
CSDE1-207ENST00000483407 FBXL20Q96IG2 436 aa5.38□□□□□ -1.55
CSDE1-207ENST00000483407 CAPZA3Q96KX2 299 aa5.38□□□□□ -1.55
CSDE1-207ENST00000483407 ZNF597Q96LX8 424 aa5.38□□□□□ -1.55
CSDE1-207ENST00000483407 GAL3ST4Q96RP7 486 aa5.38□□□□□ -1.55
CSDE1-207ENST00000483407 MAPKAP1Q9BPZ7 522 aa5.38□□□□□ -1.55
CSDE1-207ENST00000483407 PELOQ9BRX2 385 aaKnown RBP5.38□□□□□ -1.55
CSDE1-207ENST00000483407 TMEM79Q9BSE2 394 aa5.38□□□□□ -1.55
CSDE1-207ENST00000483407 MS4A8Q9BY19 250 aa5.38□□□□□ -1.55
CSDE1-207ENST00000483407 DDX47Q9H0S4 455 aaKnown RBP5.38□□□□□ -1.55
CSDE1-207ENST00000483407 SLC6A15Q9H2J7 730 aa5.38□□□□□ -1.55
CSDE1-207ENST00000483407 LIME1Q9H400 295 aa5.38□□□□□ -1.55
CSDE1-207ENST00000483407 RPF2Q9H7B2 306 aaKnown RBP5.38□□□□□ -1.55
CSDE1-207ENST00000483407 PLAC1Q9HBJ0 212 aa5.38□□□□□ -1.55
CSDE1-207ENST00000483407 SH2D2AQ9NP31 389 aa5.38□□□□□ -1.55
CSDE1-207ENST00000483407 DMRT3Q9NQL9 472 aa5.38□□□□□ -1.55
CSDE1-207ENST00000483407 CD274Q9NZQ7 290 aa5.38□□□□□ -1.55
CSDE1-207ENST00000483407 TXNDC16Q9P2K2 825 aa5.38□□□□□ -1.55
CSDE1-207ENST00000483407 SPRR3Q9UBC9 169 aa5.38□□□□□ -1.55
CSDE1-207ENST00000483407 ZNF629Q9UEG4 869 aaPredicted RBP5.38□□□□□ -1.55
CSDE1-207ENST00000483407 PHF11Q9UIL8 331 aa5.38□□□□□ -1.55
CSDE1-207ENST00000483407 ZNF490Q9ULM2 529 aaPredicted RBP5.38□□□□□ -1.55
CSDE1-207ENST00000483407 PSAT1Q9Y617 370 aa5.38□□□□□ -1.55
CSDE1-207ENST00000483407 TEX264Q9Y6I9 313 aa5.38□□□□□ -1.55
CSDE1-207ENST00000483407 INTS1Q8N201 2190 aaKnown RBP5.38□□□□□ -1.55
CSDE1-207ENST00000483407 ABCA2Q9BZC7 2435 aa5.37□□□□□ -1.55
CSDE1-207ENST00000483407 LRRC3CA6NJW4 275 aa5.37□□□□□ -1.55
CSDE1-207ENST00000483407 OR6C76A6NM76 312 aa5.37□□□□□ -1.55
CSDE1-207ENST00000483407 EEF1E1-BLOC1S5C9J1V9 151 aa5.37□□□□□ -1.55
CSDE1-207ENST00000483407 RTCAO00442 366 aaKnown RBP5.37□□□□□ -1.55
CSDE1-207ENST00000483407 TP53I11O14683 189 aa5.37□□□□□ -1.55
CSDE1-207ENST00000483407 TAPBPO15533 448 aa5.37□□□□□ -1.55
CSDE1-207ENST00000483407 EEF1E1O43324 174 aaKnown RBP5.37□□□□□ -1.55
CSDE1-207ENST00000483407 FGF17O60258 216 aa5.37□□□□□ -1.55
CSDE1-207ENST00000483407 TMEM127O75204 238 aa5.37□□□□□ -1.55
CSDE1-207ENST00000483407 TRAPPC6AO75865 159 aa5.37□□□□□ -1.55
CSDE1-207ENST00000483407 SNX4O95219 450 aa5.37□□□□□ -1.55
CSDE1-207ENST00000483407 LY86O95711 162 aa5.37□□□□□ -1.55
CSDE1-207ENST00000483407 C1QAP02745 245 aa5.37□□□□□ -1.55
CSDE1-207ENST00000483407 IGKV3-11P04433 115 aa5.37□□□□□ -1.55
CSDE1-207ENST00000483407 RFPL3SP0C7P2 107 aa5.37□□□□□ -1.55
CSDE1-207ENST00000483407 CCDC166P0CW27 439 aa5.37□□□□□ -1.55
CSDE1-207ENST00000483407 ALOX15P16050 662 aaPredicted RBP5.37□□□□□ -1.55
CSDE1-207ENST00000483407 TCP1P17987 556 aaKnown RBP5.37□□□□□ -1.55
CSDE1-207ENST00000483407 CD22P20273 847 aa5.37□□□□□ -1.55
CSDE1-207ENST00000483407 IVDP26440 423 aa5.37□□□□□ -1.55
CSDE1-207ENST00000483407 ADSLP30566 484 aaPredicted RBP5.37□□□□□ -1.55
CSDE1-207ENST00000483407 CEACAM8P31997 349 aaPredicted RBP5.37□□□□□ -1.55
CSDE1-207ENST00000483407 OPRM1P35372 400 aa5.37□□□□□ -1.55
CSDE1-207ENST00000483407 GCKP35557 465 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms