RNA–Protein interactions for RNA: ENST00000482158.1

SF3B1-210, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 772 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-210ENST00000482158 NFAM1Q8NET5 270 aaPredicted RBP4.36□□□□□ -1.71
SF3B1-210ENST00000482158 OR52B4Q8NGK2 314 aa4.36□□□□□ -1.71
SF3B1-210ENST00000482158 TBCKQ8TEA7 893 aa4.36□□□□□ -1.71
SF3B1-210ENST00000482158 FCGR1BQ92637 280 aa4.36□□□□□ -1.71
SF3B1-210ENST00000482158 ADIPOR1Q96A54 375 aa4.36□□□□□ -1.71
SF3B1-210ENST00000482158 DNAJA3Q96EY1 480 aa4.36□□□□□ -1.71
SF3B1-210ENST00000482158 WRAP53Q9BUR4 548 aaKnown RBP4.36□□□□□ -1.71
SF3B1-210ENST00000482158 ERVK-6Q9BXR3 956 aa4.36□□□□□ -1.71
SF3B1-210ENST00000482158 RAI14Q9P0K7 980 aa4.36□□□□□ -1.71
SF3B1-210ENST00000482158 ACTR3BQ9P1U1 418 aa4.36□□□□□ -1.71
SF3B1-210ENST00000482158 CUX2O14529 1486 aa4.36□□□□□ -1.71
SF3B1-210ENST00000482158 BICDL2A1A5D9 508 aa4.35□□□□□ -1.71
SF3B1-210ENST00000482158 TRABD2BA6NFA1 517 aa4.35□□□□□ -1.71
SF3B1-210ENST00000482158 NPIPA2E9PIF3 369 aa4.35□□□□□ -1.71
SF3B1-210ENST00000482158 SNRPCP09234 159 aaKnown RBP4.35□□□□□ -1.71
SF3B1-210ENST00000482158 SRYQ05066 204 aa4.35□□□□□ -1.71
SF3B1-210ENST00000482158 ZIC1Q15915 447 aa4.35□□□□□ -1.71
SF3B1-210ENST00000482158 ADPRMQ3LIE5 342 aa4.35□□□□□ -1.71
SF3B1-210ENST00000482158 C12orf60Q5U649 245 aa4.35□□□□□ -1.71
SF3B1-210ENST00000482158 MARCH9Q86YJ5 346 aa4.35□□□□□ -1.71
SF3B1-210ENST00000482158 HPS6Q86YV9 775 aa4.35□□□□□ -1.71
SF3B1-210ENST00000482158 CERS5Q8N5B7 392 aa4.35□□□□□ -1.71
SF3B1-210ENST00000482158 AGAP11Q8TF27 550 aa4.35□□□□□ -1.71
SF3B1-210ENST00000482158 CCSER1Q9C0I3 900 aa4.35□□□□□ -1.71
SF3B1-210ENST00000482158 ACTR8Q9H981 624 aa4.35□□□□□ -1.71
SF3B1-210ENST00000482158 YAE1D1Q9NRH1 226 aa4.35□□□□□ -1.71
SF3B1-210ENST00000482158 DCAF13Q9NV06 445 aaKnown RBP4.35□□□□□ -1.71
SF3B1-210ENST00000482158 GDAP2Q9NXN4 497 aa4.35□□□□□ -1.71
SF3B1-210ENST00000482158 MTF2Q9Y483 593 aaPredicted RBP4.35□□□□□ -1.71
SF3B1-210ENST00000482158 NCAPD2Q15021 1401 aa4.35□□□□□ -1.71
SF3B1-210ENST00000482158 POGZQ7Z3K3 1410 aa4.35□□□□□ -1.71
SF3B1-210ENST00000482158 CCT8L1PA6NM43 557 aa4.34□□□□□ -1.71
SF3B1-210ENST00000482158 LGALS8O00214 317 aa4.34□□□□□ -1.71
SF3B1-210ENST00000482158 ALOX15BO15296 676 aa4.34□□□□□ -1.71
SF3B1-210ENST00000482158 LANCL1O43813 399 aa4.34□□□□□ -1.71
SF3B1-210ENST00000482158 SRSF10O75494 262 aaKnown RBP4.34□□□□□ -1.71
SF3B1-210ENST00000482158 TRIM16O95361 564 aa4.34□□□□□ -1.71
SF3B1-210ENST00000482158 SLC35G4P0C7Q5 338 aa4.34□□□□□ -1.71
SF3B1-210ENST00000482158 PVRP15151 417 aa4.34□□□□□ -1.71
SF3B1-210ENST00000482158 CCND2P30279 289 aa4.34□□□□□ -1.71
SF3B1-210ENST00000482158 IST1P53990 364 aa4.34□□□□□ -1.71
SF3B1-210ENST00000482158 GMFBP60983 142 aa4.34□□□□□ -1.71
SF3B1-210ENST00000482158 NOP14P78316 857 aaKnown RBP4.34□□□□□ -1.71
SF3B1-210ENST00000482158 BNIP1Q12981 228 aa4.34□□□□□ -1.71
SF3B1-210ENST00000482158 RUNX3Q13761 415 aa4.34□□□□□ -1.71
SF3B1-210ENST00000482158 PPP1R3AQ16821 1122 aa4.34□□□□□ -1.71
SF3B1-210ENST00000482158 CNPY1Q3B7I2 92 aa4.34□□□□□ -1.71
SF3B1-210ENST00000482158 SLC22A6Q4U2R8 563 aa4.34□□□□□ -1.71
SF3B1-210ENST00000482158 RNLSQ5VYX0 342 aa4.34□□□□□ -1.71
SF3B1-210ENST00000482158 DMKNQ6E0U4 476 aaPredicted RBP4.34□□□□□ -1.71
SF3B1-210ENST00000482158 SPINK14Q6IE38 97 aa4.34□□□□□ -1.71
SF3B1-210ENST00000482158 UNC5DQ6UXZ4 953 aa4.34□□□□□ -1.71
SF3B1-210ENST00000482158 NET1Q7Z628 596 aaPredicted RBP4.34□□□□□ -1.71
SF3B1-210ENST00000482158 TSEN54Q7Z6J9 526 aaKnown RBP4.34□□□□□ -1.71
SF3B1-210ENST00000482158 SLC39A11Q8N1S5 342 aa4.34□□□□□ -1.71
SF3B1-210ENST00000482158 CENPSQ8N2Z9 138 aa4.34□□□□□ -1.71
SF3B1-210ENST00000482158 APOL2Q9BQE5 337 aa4.34□□□□□ -1.71
SF3B1-210ENST00000482158 ECT2Q9H8V3 914 aa4.34□□□□□ -1.71
SF3B1-210ENST00000482158 GHRLQ9UBU3 117 aa4.34□□□□□ -1.71
SF3B1-210ENST00000482158 PRODH2Q9UF12 536 aa4.34□□□□□ -1.71
SF3B1-210ENST00000482158 DHRS7Q9Y394 339 aa4.34□□□□□ -1.71
SF3B1-210ENST00000482158 METP08581 1390 aa4.34□□□□□ -1.71
SF3B1-210ENST00000482158 PARD3Q8TEW0 1356 aa4.34□□□□□ -1.71
SF3B1-210ENST00000482158 COL2A1P02458 1487 aaPredicted RBP4.34□□□□□ -1.71
SF3B1-210ENST00000482158 A0A0U1RQV5 110 aa4.33□□□□□ -1.72
SF3B1-210ENST00000482158 TTC26A0AVF1 554 aa4.33□□□□□ -1.72
SF3B1-210ENST00000482158 TSC22D2O75157 780 aa4.33□□□□□ -1.72
SF3B1-210ENST00000482158 ARF4P18085 180 aaPredicted RBP4.33□□□□□ -1.72
SF3B1-210ENST00000482158 TSPAN8P19075 237 aa4.33□□□□□ -1.72
SF3B1-210ENST00000482158 OR1D4P47884 311 aa4.33□□□□□ -1.72
SF3B1-210ENST00000482158 PPIAP62937 165 aaKnown RBP4.33□□□□□ -1.72
SF3B1-210ENST00000482158 PAX2Q02962 417 aa4.33□□□□□ -1.72
SF3B1-210ENST00000482158 P4HA3Q7Z4N8 544 aa4.33□□□□□ -1.72
SF3B1-210ENST00000482158 HSCBQ8IWL3 235 aa4.33□□□□□ -1.72
SF3B1-210ENST00000482158 ZBED6CLQ96FA7 236 aaPredicted RBP4.33□□□□□ -1.72
SF3B1-210ENST00000482158 KAT8Q9H7Z6 458 aaKnown RBP4.33□□□□□ -1.72
SF3B1-210ENST00000482158 TRPV5Q9NQA5 729 aa4.33□□□□□ -1.72
SF3B1-210ENST00000482158 TAS2R3Q9NYW6 316 aa4.33□□□□□ -1.72
SF3B1-210ENST00000482158 ATXN10Q9UBB4 475 aa4.33□□□□□ -1.72
SF3B1-210ENST00000482158 FOXJ3Q9UPW0 622 aa4.33□□□□□ -1.72
SF3B1-210ENST00000482158 CFAP65Q6ZU64 1925 aaKnown RBP4.33□□□□□ -1.72
SF3B1-210ENST00000482158 FAM230AA0A1W2PPH8 454 aa4.32□□□□□ -1.72
SF3B1-210ENST00000482158 ZSCAN5CA6NGD5 496 aaPredicted RBP4.32□□□□□ -1.72
SF3B1-210ENST00000482158 C11orf98E9PRG8 122 aa4.32□□□□□ -1.72
SF3B1-210ENST00000482158 F8WDY8 70 aa4.32□□□□□ -1.72
SF3B1-210ENST00000482158 H3BTX0 84 aa4.32□□□□□ -1.72
SF3B1-210ENST00000482158 AKR7A3O95154 331 aa4.32□□□□□ -1.72
SF3B1-210ENST00000482158 RRASP10301 218 aa4.32□□□□□ -1.72
SF3B1-210ENST00000482158 HTR5AP47898 357 aa4.32□□□□□ -1.72
SF3B1-210ENST00000482158 STK19P49842 368 aaPredicted RBP4.32□□□□□ -1.72
SF3B1-210ENST00000482158 GPC3P51654 580 aa4.32□□□□□ -1.72
SF3B1-210ENST00000482158 HTD2P86397 168 aa4.32□□□□□ -1.72
SF3B1-210ENST00000482158 DPYSQ14117 519 aa4.32□□□□□ -1.72
SF3B1-210ENST00000482158 EIF2B1Q14232 305 aaKnown RBP4.32□□□□□ -1.72
SF3B1-210ENST00000482158 INAQ16352 499 aa4.32□□□□□ -1.72
SF3B1-210ENST00000482158 ZNF239Q16600 458 aaKnown RBP4.32□□□□□ -1.72
SF3B1-210ENST00000482158 CDKN3Q16667 212 aa4.32□□□□□ -1.72
SF3B1-210ENST00000482158 Q1RN00 199 aa4.32□□□□□ -1.72
SF3B1-210ENST00000482158 MICAQ29983 383 aa4.32□□□□□ -1.72
SF3B1-210ENST00000482158 SLC25A30Q5SVS4 291 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms