RNA–Protein interactions for RNA: ENST00000480658.5

CCM2-213, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,136 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-213ENST00000480658 TRMT12Q53H54 448 aaKnown RBP10.46□□□□□ -0.73
CCM2-213ENST00000480658 TCHHL1Q5QJ38 904 aaPredicted RBP10.46□□□□□ -0.73
CCM2-213ENST00000480658 NSUN5P2Q63ZY6 315 aa10.46□□□□□ -0.73
CCM2-213ENST00000480658 NOXRED1Q6NXP6 359 aa10.46□□□□□ -0.73
CCM2-213ENST00000480658 FAM111BQ6SJ93 734 aa10.46□□□□□ -0.73
CCM2-213ENST00000480658 LRIG3Q6UXM1 1119 aa10.46□□□□□ -0.73
CCM2-213ENST00000480658 SH2D5Q6ZV89 423 aa10.46□□□□□ -0.73
CCM2-213ENST00000480658 R3HCC1LQ7Z5L2 792 aaKnown RBP10.46□□□□□ -0.73
CCM2-213ENST00000480658 WDR53Q7Z5U6 358 aaPredicted RBP10.46□□□□□ -0.73
CCM2-213ENST00000480658 PLCZ1Q86YW0 608 aa10.46□□□□□ -0.73
CCM2-213ENST00000480658 OR14L1PQ8NHC6 308 aa10.46□□□□□ -0.73
CCM2-213ENST00000480658 ZPLD1Q8TCW7 415 aa10.46□□□□□ -0.73
CCM2-213ENST00000480658 HGDQ93099 445 aa10.46□□□□□ -0.73
CCM2-213ENST00000480658 UCN3Q969E3 161 aa10.46□□□□□ -0.73
CCM2-213ENST00000480658 ABTB1Q969K4 478 aaPredicted RBP10.46□□□□□ -0.73
CCM2-213ENST00000480658 MTERF3Q96E29 417 aa10.46□□□□□ -0.73
CCM2-213ENST00000480658 ZBED6CLQ96FA7 236 aaPredicted RBP10.46□□□□□ -0.73
CCM2-213ENST00000480658 APIPQ96GX9 242 aa10.46□□□□□ -0.73
CCM2-213ENST00000480658 TIMP4Q99727 224 aa10.46□□□□□ -0.73
CCM2-213ENST00000480658 OR2B2Q9GZK3 357 aa10.46□□□□□ -0.73
CCM2-213ENST00000480658 PTGES2Q9H7Z7 377 aa10.46□□□□□ -0.73
CCM2-213ENST00000480658 C1orf109Q9NX04 203 aa10.46□□□□□ -0.73
CCM2-213ENST00000480658 HEY2Q9UBP5 337 aa10.46□□□□□ -0.73
CCM2-213ENST00000480658 Q9UFV3 132 aa10.46□□□□□ -0.73
CCM2-213ENST00000480658 EMCNQ9ULC0 261 aa10.46□□□□□ -0.73
CCM2-213ENST00000480658 CAMK2AQ9UQM7 478 aa10.46□□□□□ -0.73
CCM2-213ENST00000480658 TIMM22Q9Y584 194 aa10.46□□□□□ -0.73
CCM2-213ENST00000480658 ABCA12Q86UK0 2595 aa10.46□□□□□ -0.74
CCM2-213ENST00000480658 A0A1W2PS29 197 aa10.45□□□□□ -0.74
CCM2-213ENST00000480658 MBD3L4A6NDZ8 208 aaPredicted RBP10.45□□□□□ -0.74
CCM2-213ENST00000480658 MBD3L3A6NE82 208 aaPredicted RBP10.45□□□□□ -0.74
CCM2-213ENST00000480658 MBD3L5A6NJ08 208 aaPredicted RBP10.45□□□□□ -0.74
CCM2-213ENST00000480658 C19orf84I3L1E1 186 aa10.45□□□□□ -0.74
CCM2-213ENST00000480658 AZIN1O14977 448 aa10.45□□□□□ -0.74
CCM2-213ENST00000480658 PDPK1O15530 556 aa10.45□□□□□ -0.74
CCM2-213ENST00000480658 NPHS1O60500 1241 aa10.45□□□□□ -0.74
CCM2-213ENST00000480658 UGT2B11O75310 529 aa10.45□□□□□ -0.74
CCM2-213ENST00000480658 SEC22BO75396 215 aa10.45□□□□□ -0.74
CCM2-213ENST00000480658 KCNH1O95259 989 aa10.45□□□□□ -0.74
CCM2-213ENST00000480658 TUBBP07437 444 aa10.45□□□□□ -0.74
CCM2-213ENST00000480658 CT45A8P0DMV1 189 aa10.45□□□□□ -0.74
CCM2-213ENST00000480658 CT45A9P0DMV2 189 aa10.45□□□□□ -0.74
CCM2-213ENST00000480658 LCN1P31025 176 aa10.45□□□□□ -0.74
CCM2-213ENST00000480658 HTR6P50406 440 aa10.45□□□□□ -0.74
CCM2-213ENST00000480658 MYBPHQ13203 477 aa10.45□□□□□ -0.74
CCM2-213ENST00000480658 GAB1Q13480 694 aa10.45□□□□□ -0.74
CCM2-213ENST00000480658 FGFBP1Q14512 234 aa10.45□□□□□ -0.74
CCM2-213ENST00000480658 NNATQ16517 81 aa10.45□□□□□ -0.74
CCM2-213ENST00000480658 FBXL19-AS1Q494R0 122 aa10.45□□□□□ -0.74
CCM2-213ENST00000480658 CT45A2Q5DJT8 189 aa10.45□□□□□ -0.74
CCM2-213ENST00000480658 RTL6Q6ICC9 239 aa10.45□□□□□ -0.74
CCM2-213ENST00000480658 FAM71E1Q6IPT2 247 aa10.45□□□□□ -0.74
CCM2-213ENST00000480658 NCCRP1Q6ZVX7 275 aaPredicted RBP10.45□□□□□ -0.74
CCM2-213ENST00000480658 LARP4Q71RC2 724 aaKnown RBP eCLIP10.45□□□□□ -0.749e-6■■■■■ 29.6
CCM2-213ENST00000480658 CROCCP2Q86T23 111 aa10.45□□□□□ -0.74
CCM2-213ENST00000480658 CCDC71Q8IV32 467 aaPredicted RBP10.45□□□□□ -0.74
CCM2-213ENST00000480658 PRR22Q8IZ63 422 aa10.45□□□□□ -0.74
CCM2-213ENST00000480658 OR2L13Q8N349 312 aa10.45□□□□□ -0.74
CCM2-213ENST00000480658 FAM83FQ8NEG4 500 aaPredicted RBP10.45□□□□□ -0.74
CCM2-213ENST00000480658 CEP70Q8NHQ1 597 aa10.45□□□□□ -0.74
CCM2-213ENST00000480658 MBD3L2Q8NHZ7 208 aaPredicted RBP10.45□□□□□ -0.74
CCM2-213ENST00000480658 CDC26Q8NHZ8 85 aa10.45□□□□□ -0.74
CCM2-213ENST00000480658 TMBIM1Q969X1 311 aa10.45□□□□□ -0.74
CCM2-213ENST00000480658 GNRHR2Q96P88 292 aa10.45□□□□□ -0.74
CCM2-213ENST00000480658 UCN2Q96RP3 112 aa10.45□□□□□ -0.74
CCM2-213ENST00000480658 EBPLQ9BY08 206 aa10.45□□□□□ -0.74
CCM2-213ENST00000480658 FOLH1BQ9HBA9 442 aa10.45□□□□□ -0.74
CCM2-213ENST00000480658 LRTM1Q9HBL6 345 aa10.45□□□□□ -0.74
CCM2-213ENST00000480658 DKKL1Q9UK85 242 aa10.45□□□□□ -0.74
CCM2-213ENST00000480658 C19orf53Q9UNZ5 99 aaPredicted RBP10.45□□□□□ -0.74
CCM2-213ENST00000480658 MAPRE3Q9UPY8 281 aa10.45□□□□□ -0.74
CCM2-213ENST00000480658 DTX4Q9Y2E6 619 aa10.45□□□□□ -0.74
CCM2-213ENST00000480658 HRH3Q9Y5N1 445 aa10.45□□□□□ -0.74
CCM2-213ENST00000480658 MYO7BQ6PIF6 2116 aa10.45□□□□□ -0.74
CCM2-213ENST00000480658 A0A1W2PPM1 405 aa10.44□□□□□ -0.74
CCM2-213ENST00000480658 NKX2-6A6NCS4 301 aa10.44□□□□□ -0.74
CCM2-213ENST00000480658 SMIM23A6NLE4 172 aa10.44□□□□□ -0.74
CCM2-213ENST00000480658 H0Y3Z8 333 aa10.44□□□□□ -0.74
CCM2-213ENST00000480658 SYT5O00445 386 aa10.44□□□□□ -0.74
CCM2-213ENST00000480658 UBFD1O14562 309 aaKnown RBP10.44□□□□□ -0.74
CCM2-213ENST00000480658 GNB5O14775 395 aa10.44□□□□□ -0.74
CCM2-213ENST00000480658 ZNHIT1O43257 154 aa10.44□□□□□ -0.74
CCM2-213ENST00000480658 TBX19O60806 448 aa10.44□□□□□ -0.74
CCM2-213ENST00000480658 SHBGP04278 402 aa10.44□□□□□ -0.74
CCM2-213ENST00000480658 FGF4P08620 206 aa10.44□□□□□ -0.74
CCM2-213ENST00000480658 BMP5P22003 454 aa10.44□□□□□ -0.74
CCM2-213ENST00000480658 CEACAM8P31997 349 aaPredicted RBP10.44□□□□□ -0.74
CCM2-213ENST00000480658 EVI2BP34910 448 aa10.44□□□□□ -0.74
CCM2-213ENST00000480658 GPC1P35052 558 aa10.44□□□□□ -0.74
CCM2-213ENST00000480658 HPCAL1P37235 193 aa10.44□□□□□ -0.74
CCM2-213ENST00000480658 TRPC1P48995 793 aa10.44□□□□□ -0.74
CCM2-213ENST00000480658 DSCR4P56555 118 aaPredicted RBP10.44□□□□□ -0.74
CCM2-213ENST00000480658 PRR5P85299 388 aa10.44□□□□□ -0.74
CCM2-213ENST00000480658 SORDQ00796 357 aa10.44□□□□□ -0.74
CCM2-213ENST00000480658 OCRLQ01968 901 aa10.44□□□□□ -0.74
CCM2-213ENST00000480658 BTKQ06187 659 aa10.44□□□□□ -0.74
CCM2-213ENST00000480658 MAD2L1Q13257 205 aaPredicted RBP10.44□□□□□ -0.74
CCM2-213ENST00000480658 CDSNQ15517 529 aa10.44□□□□□ -0.74
CCM2-213ENST00000480658 LTB4RQ15722 352 aa10.44□□□□□ -0.74
CCM2-213ENST00000480658 BCL2A1Q16548 175 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms