RNA–Protein interactions for RNA: ENST00000479602.5

DDX56-211, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 440 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-211ENST00000479602 NEURL3Q96EH8 262 aa8.23□□□□□ -1.09
DDX56-211ENST00000479602 ZNF354BQ96LW1 612 aa8.23□□□□□ -1.09
DDX56-211ENST00000479602 CCT8L2Q96SF2 557 aa8.23□□□□□ -1.09
DDX56-211ENST00000479602 OR10A5Q9H207 317 aa8.23□□□□□ -1.09
DDX56-211ENST00000479602 C3orf14Q9HBI5 128 aa8.23□□□□□ -1.09
DDX56-211ENST00000479602 OLAHQ9NV23 265 aa8.23□□□□□ -1.09
DDX56-211ENST00000479602 MYOTQ9UBF9 498 aa8.23□□□□□ -1.09
DDX56-211ENST00000479602 ZNF835Q9Y2P0 537 aa8.23□□□□□ -1.09
DDX56-211ENST00000479602 GPR55Q9Y2T6 319 aaPredicted RBP8.23□□□□□ -1.09
DDX56-211ENST00000479602 YARS2Q9Y2Z4 477 aaKnown RBP8.23□□□□□ -1.09
DDX56-211ENST00000479602 MAP1AP78559 2803 aaPredicted RBP8.23□□□□□ -1.09
DDX56-211ENST00000479602 A0A096LPI6 279 aa8.22□□□□□ -1.09
DDX56-211ENST00000479602 ANKRD33BA6NCL7 494 aa8.22□□□□□ -1.09
DDX56-211ENST00000479602 GLOD5A6NK44 160 aa8.22□□□□□ -1.09
DDX56-211ENST00000479602 DUXAA6NLW8 204 aa8.22□□□□□ -1.09
DDX56-211ENST00000479602 CAPN14A8MX76 684 aa8.22□□□□□ -1.09
DDX56-211ENST00000479602 SEC24DO94855 1032 aaPredicted RBP8.22□□□□□ -1.09
DDX56-211ENST00000479602 NKX2-2O95096 273 aa8.22□□□□□ -1.09
DDX56-211ENST00000479602 IFNA16P05015 189 aa8.22□□□□□ -1.09
DDX56-211ENST00000479602 CT62P0C5K7 136 aa8.22□□□□□ -1.09
DDX56-211ENST00000479602 ITGAMP11215 1152 aa8.22□□□□□ -1.09
DDX56-211ENST00000479602 UQCRC2P22695 453 aa8.22□□□□□ -1.09
DDX56-211ENST00000479602 GRNP28799 593 aaKnown RBP8.22□□□□□ -1.09
DDX56-211ENST00000479602 MAN2A2P49641 1150 aa8.22□□□□□ -1.09
DDX56-211ENST00000479602 ANXA11P50995 505 aaKnown RBP8.22□□□□□ -1.09
DDX56-211ENST00000479602 MANFP55145 182 aaKnown RBP8.22□□□□□ -1.09
DDX56-211ENST00000479602 KCNK10P57789 538 aa8.22□□□□□ -1.09
DDX56-211ENST00000479602 MLF1P58340 268 aa8.22□□□□□ -1.09
DDX56-211ENST00000479602 HBA1P69905 142 aa8.22□□□□□ -1.09
DDX56-211ENST00000479602 EEF1A2Q05639 463 aaKnown RBP8.22□□□□□ -1.09
DDX56-211ENST00000479602 MEP1AQ16819 746 aa8.22□□□□□ -1.09
DDX56-211ENST00000479602 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.22□□□□□ -1.09
DDX56-211ENST00000479602 PRSS53Q2L4Q9 553 aa8.22□□□□□ -1.09
DDX56-211ENST00000479602 BTBD16Q32M84 506 aa8.22□□□□□ -1.09
DDX56-211ENST00000479602 CYP27C1Q4G0S4 372 aa8.22□□□□□ -1.09
DDX56-211ENST00000479602 IRAK1BP1Q5VVH5 260 aa8.22□□□□□ -1.09
DDX56-211ENST00000479602 PRAMEF8Q5VWM4 474 aa8.22□□□□□ -1.09
DDX56-211ENST00000479602 PRAMEF7Q5VXH5 474 aa8.22□□□□□ -1.09
DDX56-211ENST00000479602 SAXO2Q658L1 398 aa8.22□□□□□ -1.09
DDX56-211ENST00000479602 OR4F3Q6IEY1 312 aa8.22□□□□□ -1.09
DDX56-211ENST00000479602 SLC29A4Q7RTT9 530 aa8.22□□□□□ -1.09
DDX56-211ENST00000479602 CHERPQ8IWX8 916 aaKnown RBP8.22□□□□□ -1.09
DDX56-211ENST00000479602 C9orf40Q8IXQ3 194 aa8.22□□□□□ -1.09
DDX56-211ENST00000479602 METTL25Q8N6Q8 603 aa8.22□□□□□ -1.09
DDX56-211ENST00000479602 OR7G2Q8NG99 324 aa8.22□□□□□ -1.09
DDX56-211ENST00000479602 OR9A2Q8NGT5 310 aa8.22□□□□□ -1.09
DDX56-211ENST00000479602 CLHC1Q8NHS4 586 aa8.22□□□□□ -1.09
DDX56-211ENST00000479602 C16orf52Q8NHV5 167 aa8.22□□□□□ -1.09
DDX56-211ENST00000479602 RP9Q8TA86 221 aaKnown RBP8.22□□□□□ -1.09
DDX56-211ENST00000479602 NCLNQ969V3 563 aa8.22□□□□□ -1.09
DDX56-211ENST00000479602 MARVELD3Q96A59 401 aa8.22□□□□□ -1.09
DDX56-211ENST00000479602 ROPN1LQ96C74 230 aa8.22□□□□□ -1.09
DDX56-211ENST00000479602 FAM120BQ96EK7 910 aaKnown RBP8.22□□□□□ -1.09
DDX56-211ENST00000479602 SLC35A4Q96G79 324 aa8.22□□□□□ -1.09
DDX56-211ENST00000479602 ITCHQ96J02 903 aa8.22□□□□□ -1.09
DDX56-211ENST00000479602 SGCZQ96LD1 299 aa8.22□□□□□ -1.09
DDX56-211ENST00000479602 RILPQ96NA2 401 aa8.22□□□□□ -1.09
DDX56-211ENST00000479602 OR52E6Q96RD3 313 aa8.22□□□□□ -1.09
DDX56-211ENST00000479602 NPAS2Q99743 824 aa8.22□□□□□ -1.09
DDX56-211ENST00000479602 SPATA9Q9BWV2 254 aa8.22□□□□□ -1.09
DDX56-211ENST00000479602 NMUR2Q9GZQ4 415 aa8.22□□□□□ -1.09
DDX56-211ENST00000479602 WWTR1Q9GZV5 400 aa8.22□□□□□ -1.09
DDX56-211ENST00000479602 RAD21L1Q9H4I0 556 aa8.22□□□□□ -1.09
DDX56-211ENST00000479602 PRM3Q9NNZ6 103 aa8.22□□□□□ -1.09
DDX56-211ENST00000479602 SH2D2AQ9NP31 389 aa8.22□□□□□ -1.09
DDX56-211ENST00000479602 POLE3Q9NRF9 147 aa8.22□□□□□ -1.09
DDX56-211ENST00000479602 DDX18Q9NVP1 670 aaKnown RBP8.22□□□□□ -1.09
DDX56-211ENST00000479602 GPATCH2Q9NW75 528 aa8.22□□□□□ -1.09
DDX56-211ENST00000479602 STMN3Q9NZ72 180 aa8.22□□□□□ -1.09
DDX56-211ENST00000479602 SH3BP4Q9P0V3 963 aa8.22□□□□□ -1.09
DDX56-211ENST00000479602 LEF1Q9UJU2 399 aaPredicted RBP8.22□□□□□ -1.09
DDX56-211ENST00000479602 CORO2BQ9UQ03 480 aa8.22□□□□□ -1.09
DDX56-211ENST00000479602 ERVK-19Q9WJR5 959 aa8.22□□□□□ -1.09
DDX56-211ENST00000479602 AP3M1Q9Y2T2 418 aa8.22□□□□□ -1.09
DDX56-211ENST00000479602 NDUFAF1Q9Y375 327 aa8.22□□□□□ -1.09
DDX56-211ENST00000479602 CAPN7Q9Y6W3 813 aa8.22□□□□□ -1.09
DDX56-211ENST00000479602 C15orf38-AP3S2A0A0A6YYH1 394 aa8.21□□□□□ -1.1
DDX56-211ENST00000479602 A0A1W2PS29 197 aa8.21□□□□□ -1.1
DDX56-211ENST00000479602 ASPDHA6ND91 283 aa8.21□□□□□ -1.1
DDX56-211ENST00000479602 OR5H15A6NDH6 313 aa8.21□□□□□ -1.1
DDX56-211ENST00000479602 FCHO1O14526 889 aa8.21□□□□□ -1.1
DDX56-211ENST00000479602 NADKO95544 446 aaPredicted RBP8.21□□□□□ -1.1
DDX56-211ENST00000479602 SNRPB2P08579 225 aaKnown RBP8.21□□□□□ -1.1
DDX56-211ENST00000479602 FBXO45P0C2W1 286 aa8.21□□□□□ -1.1
DDX56-211ENST00000479602 CT45A8P0DMV1 189 aa8.21□□□□□ -1.1
DDX56-211ENST00000479602 CT45A9P0DMV2 189 aa8.21□□□□□ -1.1
DDX56-211ENST00000479602 CAPN3P20807 821 aa8.21□□□□□ -1.1
DDX56-211ENST00000479602 AGAP20933 346 aa8.21□□□□□ -1.1
DDX56-211ENST00000479602 NT5EP21589 574 aa8.21□□□□□ -1.1
DDX56-211ENST00000479602 FEN1P39748 380 aaKnown RBP8.21□□□□□ -1.1
DDX56-211ENST00000479602 MC3RP41968 323 aa8.21□□□□□ -1.1
DDX56-211ENST00000479602 CA7P43166 264 aa8.21□□□□□ -1.1
DDX56-211ENST00000479602 PRIM2P49643 509 aa8.21□□□□□ -1.1
DDX56-211ENST00000479602 MVDP53602 400 aa8.21□□□□□ -1.1
DDX56-211ENST00000479602 PER3P56645 1201 aa8.21□□□□□ -1.1
DDX56-211ENST00000479602 ARG2P78540 354 aa8.21□□□□□ -1.1
DDX56-211ENST00000479602 PSG6Q00889 435 aa8.21□□□□□ -1.1
DDX56-211ENST00000479602 KLF10Q13118 480 aa8.21□□□□□ -1.1
DDX56-211ENST00000479602 STX5Q13190 355 aa8.21□□□□□ -1.1
DDX56-211ENST00000479602 DUSP8Q13202 625 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms