RNA–Protein interactions for RNA: ENST00000479555.1

CMSS1-204, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 4

Gene CMSS1, Length 654 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-204ENST00000479555 HOXC13P31276 330 aa3.79□□□□□ -1.8
CMSS1-204ENST00000479555 RFC2P35250 354 aa3.79□□□□□ -1.8
CMSS1-204ENST00000479555 SPRP35270 261 aaPredicted RBP3.79□□□□□ -1.8
CMSS1-204ENST00000479555 EIF2S3P41091 472 aaKnown RBP3.79□□□□□ -1.8
CMSS1-204ENST00000479555 PPP3CCP48454 512 aa3.79□□□□□ -1.8
CMSS1-204ENST00000479555 INPP1P49441 399 aa3.79□□□□□ -1.8
CMSS1-204ENST00000479555 CLCNKAP51800 687 aa3.79□□□□□ -1.8
CMSS1-204ENST00000479555 ARSFP54793 590 aa3.79□□□□□ -1.8
CMSS1-204ENST00000479555 YWHAZP63104 245 aaKnown RBP3.79□□□□□ -1.8
CMSS1-204ENST00000479555 GCNT1Q02742 428 aa3.79□□□□□ -1.8
CMSS1-204ENST00000479555 CRYZQ08257 329 aaKnown RBP3.79□□□□□ -1.8
CMSS1-204ENST00000479555 FGL1Q08830 312 aa3.79□□□□□ -1.8
CMSS1-204ENST00000479555 MGAT3Q09327 533 aa3.79□□□□□ -1.8
CMSS1-204ENST00000479555 ELP6Q0PNE2 266 aa3.79□□□□□ -1.8
CMSS1-204ENST00000479555 ABRQ12979 859 aa3.79□□□□□ -1.8
CMSS1-204ENST00000479555 CEACAM7Q14002 265 aa3.79□□□□□ -1.8
CMSS1-204ENST00000479555 COTL1Q14019 142 aa3.79□□□□□ -1.8
CMSS1-204ENST00000479555 HNF4GQ14541 408 aa3.79□□□□□ -1.8
CMSS1-204ENST00000479555 LTB4RQ15722 352 aa3.79□□□□□ -1.8
CMSS1-204ENST00000479555 HLFQ16534 295 aa3.79□□□□□ -1.8
CMSS1-204ENST00000479555 EIF2S3LQ2VIR3 472 aaKnown RBP3.79□□□□□ -1.8
CMSS1-204ENST00000479555 KRTAP24-1Q3LI83 254 aa3.79□□□□□ -1.8
CMSS1-204ENST00000479555 PDZK1Q5T2W1 519 aa3.79□□□□□ -1.8
CMSS1-204ENST00000479555 FAM69AQ5T7M9 428 aa3.79□□□□□ -1.8
CMSS1-204ENST00000479555 TCEAL6Q6IPX3 200 aa3.79□□□□□ -1.8
CMSS1-204ENST00000479555 TATDN1Q6P1N9 297 aa3.79□□□□□ -1.8
CMSS1-204ENST00000479555 C5orf46Q6UWT4 87 aa3.79□□□□□ -1.8
CMSS1-204ENST00000479555 TFAP2EQ6VUC0 442 aa3.79□□□□□ -1.8
CMSS1-204ENST00000479555 SLC16A12Q6ZSM3 486 aa3.79□□□□□ -1.8
CMSS1-204ENST00000479555 COPS6Q7L5N1 327 aa3.79□□□□□ -1.8
CMSS1-204ENST00000479555 STRADAQ7RTN6 431 aa3.79□□□□□ -1.8
CMSS1-204ENST00000479555 PRSS45Q7RTY3 260 aa3.79□□□□□ -1.8
CMSS1-204ENST00000479555 R3HCC1LQ7Z5L2 792 aaKnown RBP3.79□□□□□ -1.8
CMSS1-204ENST00000479555 GALNT10Q86SR1 603 aa3.79□□□□□ -1.8
CMSS1-204ENST00000479555 COMTD1Q86VU5 262 aa3.79□□□□□ -1.8
CMSS1-204ENST00000479555 TMEM17Q86X19 198 aa3.79□□□□□ -1.8
CMSS1-204ENST00000479555 HIPK1Q86Z02 1210 aa3.79□□□□□ -1.8
CMSS1-204ENST00000479555 TMC8Q8IU68 726 aa3.79□□□□□ -1.8
CMSS1-204ENST00000479555 ZDHHC23Q8IYP9 409 aa3.79□□□□□ -1.8
CMSS1-204ENST00000479555 FAM71AQ8IYT1 594 aa3.79□□□□□ -1.8
CMSS1-204ENST00000479555 RDH10Q8IZV5 341 aa3.79□□□□□ -1.8
CMSS1-204ENST00000479555 EID3Q8N140 333 aa3.79□□□□□ -1.8
CMSS1-204ENST00000479555 STPG2Q8N412 459 aa3.79□□□□□ -1.8
CMSS1-204ENST00000479555 ATPAF2Q8N5M1 289 aa3.79□□□□□ -1.8
CMSS1-204ENST00000479555 PARP16Q8N5Y8 322 aa3.79□□□□□ -1.8
CMSS1-204ENST00000479555 C11orf65Q8NCR3 313 aa3.79□□□□□ -1.8
CMSS1-204ENST00000479555 C19orf18Q8NEA5 215 aa3.79□□□□□ -1.8
CMSS1-204ENST00000479555 OR9Q1Q8NGQ5 310 aa3.79□□□□□ -1.8
CMSS1-204ENST00000479555 NFKBIDQ8NI38 313 aa3.79□□□□□ -1.8
CMSS1-204ENST00000479555 ITFG1Q8TB96 612 aa3.79□□□□□ -1.8
CMSS1-204ENST00000479555 MAGEE2Q8TD90 523 aaPredicted RBP3.79□□□□□ -1.8
CMSS1-204ENST00000479555 HEXDCQ8WVB3 486 aa3.79□□□□□ -1.8
CMSS1-204ENST00000479555 ASB13Q8WXK3 278 aa3.79□□□□□ -1.8
CMSS1-204ENST00000479555 ADAMTS14Q8WXS8 1223 aa3.79□□□□□ -1.8
CMSS1-204ENST00000479555 LPGAT1Q92604 370 aa3.79□□□□□ -1.8
CMSS1-204ENST00000479555 CPNE4Q96A23 557 aaPredicted RBP3.79□□□□□ -1.8
CMSS1-204ENST00000479555 RAB7BQ96AH8 199 aa3.79□□□□□ -1.8
CMSS1-204ENST00000479555 PTERQ96BW5 349 aa3.79□□□□□ -1.8
CMSS1-204ENST00000479555 RCN3Q96D15 328 aa3.79□□□□□ -1.8
CMSS1-204ENST00000479555 ELP4Q96EB1 424 aa3.79□□□□□ -1.8
CMSS1-204ENST00000479555 YIPF6Q96EC8 236 aa3.79□□□□□ -1.8
CMSS1-204ENST00000479555 PHF21BQ96EK2 531 aa3.79□□□□□ -1.8
CMSS1-204ENST00000479555 ZNF419Q96HQ0 510 aaPredicted RBP3.79□□□□□ -1.8
CMSS1-204ENST00000479555 SERAC1Q96JX3 654 aa3.79□□□□□ -1.8
CMSS1-204ENST00000479555 RNF170Q96K19 258 aa3.79□□□□□ -1.8
CMSS1-204ENST00000479555 NSMCE2Q96MF7 247 aa3.79□□□□□ -1.8
CMSS1-204ENST00000479555 Q96MT0 163 aa3.79□□□□□ -1.8
CMSS1-204ENST00000479555 GPR137Q96N19 417 aa3.79□□□□□ -1.8
CMSS1-204ENST00000479555 WDFY2Q96P53 400 aa3.79□□□□□ -1.8
CMSS1-204ENST00000479555 ZNF300Q96RE9 604 aaPredicted RBP3.79□□□□□ -1.8
CMSS1-204ENST00000479555 TTYH2Q9BSA4 534 aa3.79□□□□□ -1.8
CMSS1-204ENST00000479555 C1QTNF1Q9BXJ1 281 aa3.79□□□□□ -1.8
CMSS1-204ENST00000479555 ZYG11BQ9C0D3 744 aa3.79□□□□□ -1.8
CMSS1-204ENST00000479555 ROGDIQ9GZN7 287 aa3.79□□□□□ -1.8
CMSS1-204ENST00000479555 SHARPINQ9H0F6 387 aa3.79□□□□□ -1.8
CMSS1-204ENST00000479555 DNTTIP1Q9H147 329 aa3.79□□□□□ -1.8
CMSS1-204ENST00000479555 DCSTAMPQ9H295 470 aa3.79□□□□□ -1.8
CMSS1-204ENST00000479555 SEMA6AQ9H2E6 1030 aa3.79□□□□□ -1.8
CMSS1-204ENST00000479555 CATSPERBQ9H7T0 1116 aa3.79□□□□□ -1.8
CMSS1-204ENST00000479555 CYP3A43Q9HB55 503 aa3.79□□□□□ -1.8
CMSS1-204ENST00000479555 IL21RQ9HBE5 538 aa3.79□□□□□ -1.8
CMSS1-204ENST00000479555 ASAH2Q9NR71 780 aa3.79□□□□□ -1.8
CMSS1-204ENST00000479555 ABCC13Q9NSE7 274 aa3.79□□□□□ -1.8
CMSS1-204ENST00000479555 CMTM6Q9NX76 183 aa3.79□□□□□ -1.8
CMSS1-204ENST00000479555 RDH8Q9NYR8 311 aa3.79□□□□□ -1.8
CMSS1-204ENST00000479555 MED11Q9P086 117 aa3.79□□□□□ -1.8
CMSS1-204ENST00000479555 TMEM216Q9P0N5 145 aa3.79□□□□□ -1.8
CMSS1-204ENST00000479555 STOX2Q9P2F5 926 aaPredicted RBP3.79□□□□□ -1.8
CMSS1-204ENST00000479555 ERVK-18Q9QC07 812 aa3.79□□□□□ -1.8
CMSS1-204ENST00000479555 WNT16Q9UBV4 365 aa3.79□□□□□ -1.8
CMSS1-204ENST00000479555 SLC25A10Q9UBX3 287 aaPredicted RBP3.79□□□□□ -1.8
CMSS1-204ENST00000479555 CDH9Q9ULB4 789 aa3.79□□□□□ -1.8
CMSS1-204ENST00000479555 COPS3Q9UNS2 423 aa3.79□□□□□ -1.8
CMSS1-204ENST00000479555 AURKCQ9UQB9 309 aa3.79□□□□□ -1.8
CMSS1-204ENST00000479555 HSPB11Q9Y547 144 aa3.79□□□□□ -1.8
CMSS1-204ENST00000479555 KLK4Q9Y5K2 254 aa3.79□□□□□ -1.8
CMSS1-204ENST00000479555 TEX264Q9Y6I9 313 aa3.79□□□□□ -1.8
CMSS1-204ENST00000479555 AP1M2Q9Y6Q5 423 aa3.79□□□□□ -1.8
CMSS1-204ENST00000479555 DUOX1Q9NRD9 1551 aa3.79□□□□□ -1.8
CMSS1-204ENST00000479555 ZNFX1Q9P2E3 1918 aaKnown RBP3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms