RNA–Protein interactions for RNA: ENST00000479554.5

ATG4B-218, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 556 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-218ENST00000479554 PM20D2Q8IYS1 436 aa13.11□□□□□ -0.31
ATG4B-218ENST00000479554 GBP7Q8N8V2 638 aaPredicted RBP13.11□□□□□ -0.31
ATG4B-218ENST00000479554 CCDC197Q8NCU1 140 aa13.11□□□□□ -0.31
ATG4B-218ENST00000479554 RDH11Q8TC12 318 aa13.11□□□□□ -0.31
ATG4B-218ENST00000479554 OMA1Q96E52 524 aa13.11□□□□□ -0.31
ATG4B-218ENST00000479554 HSPBAP1Q96EW2 488 aa13.11□□□□□ -0.31
ATG4B-218ENST00000479554 LCORQ96JN0 433 aaPredicted RBP13.11□□□□□ -0.31
ATG4B-218ENST00000479554 ELAC2Q9BQ52 826 aaKnown RBP13.11□□□□□ -0.31
ATG4B-218ENST00000479554 ACPTQ9BZG2 426 aa13.11□□□□□ -0.31
ATG4B-218ENST00000479554 UBQLN3Q9H347 655 aa13.11□□□□□ -0.31
ATG4B-218ENST00000479554 HEY2Q9UBP5 337 aa13.11□□□□□ -0.31
ATG4B-218ENST00000479554 PRODH2Q9UF12 536 aa13.11□□□□□ -0.31
ATG4B-218ENST00000479554 UTS2RQ9UKP6 389 aa13.11□□□□□ -0.31
ATG4B-218ENST00000479554 CCDC168Q8NDH2 2452 aa13.11□□□□□ -0.31
ATG4B-218ENST00000479554 TEP1Q99973 2627 aaKnown RBP13.1□□□□□ -0.31
ATG4B-218ENST00000479554 HSPB2A8KAH6 182 aa13.1□□□□□ -0.31
ATG4B-218ENST00000479554 AHRRA9YTQ3 701 aa13.1□□□□□ -0.31
ATG4B-218ENST00000479554 GNB5O14775 395 aa13.1□□□□□ -0.31
ATG4B-218ENST00000479554 SNX3O60493 162 aa13.1□□□□□ -0.31
ATG4B-218ENST00000479554 CBX7O95931 251 aa13.1□□□□□ -0.31
ATG4B-218ENST00000479554 ENO1P06733 434 aaKnown RBP13.1□□□□□ -0.31
ATG4B-218ENST00000479554 CPA3P15088 417 aa13.1□□□□□ -0.31
ATG4B-218ENST00000479554 PCSK2P16519 638 aa13.1□□□□□ -0.31
ATG4B-218ENST00000479554 HTR6P50406 440 aa13.1□□□□□ -0.31
ATG4B-218ENST00000479554 PRKAA2P54646 552 aa13.1□□□□□ -0.31
ATG4B-218ENST00000479554 PKNOX1P55347 436 aa13.1□□□□□ -0.31
ATG4B-218ENST00000479554 MRPS35P82673 323 aaKnown RBP13.1□□□□□ -0.31
ATG4B-218ENST00000479554 ACSM2AQ08AH3 577 aa13.1□□□□□ -0.31
ATG4B-218ENST00000479554 CHI3L2Q15782 390 aa13.1□□□□□ -0.31
ATG4B-218ENST00000479554 HSPB2Q16082 182 aa13.1□□□□□ -0.31
ATG4B-218ENST00000479554 ACSF3Q4G176 576 aaPredicted RBP13.1□□□□□ -0.31
ATG4B-218ENST00000479554 TRMT12Q53H54 448 aaKnown RBP13.1□□□□□ -0.31
ATG4B-218ENST00000479554 SPIN4Q56A73 249 aa13.1□□□□□ -0.31
ATG4B-218ENST00000479554 CES4AQ5XG92 561 aa13.1□□□□□ -0.31
ATG4B-218ENST00000479554 ACSM2BQ68CK6 577 aa13.1□□□□□ -0.31
ATG4B-218ENST00000479554 TMEM81Q6P7N7 255 aa13.1□□□□□ -0.31
ATG4B-218ENST00000479554 ANGPTL8Q6UXH0 198 aa13.1□□□□□ -0.31
ATG4B-218ENST00000479554 SAMD14Q8IZD0 417 aaPredicted RBP13.1□□□□□ -0.31
ATG4B-218ENST00000479554 ANKS4BQ8N8V4 417 aa13.1□□□□□ -0.31
ATG4B-218ENST00000479554 SIMC1Q8NDZ2 872 aa13.1□□□□□ -0.31
ATG4B-218ENST00000479554 OR1J4Q8NGS1 313 aa13.1□□□□□ -0.31
ATG4B-218ENST00000479554 PPP1R14CQ8TAE6 165 aa13.1□□□□□ -0.31
ATG4B-218ENST00000479554 CTHRC1Q96CG8 243 aa13.1□□□□□ -0.31
ATG4B-218ENST00000479554 L3HYPDHQ96EM0 354 aa13.1□□□□□ -0.31
ATG4B-218ENST00000479554 ZNF681Q96N22 645 aa13.1□□□□□ -0.31
ATG4B-218ENST00000479554 MECRQ9BV79 373 aa13.1□□□□□ -0.31
ATG4B-218ENST00000479554 OSBPL11Q9BXB4 747 aa13.1□□□□□ -0.31
ATG4B-218ENST00000479554 EHD3Q9NZN3 535 aa13.1□□□□□ -0.31
ATG4B-218ENST00000479554 KLRF1Q9NZS2 232 aa13.1□□□□□ -0.31
ATG4B-218ENST00000479554 CAMK2AQ9UQM7 478 aa13.1□□□□□ -0.31
ATG4B-218ENST00000479554 DLGAP4Q9Y2H0 992 aa13.1□□□□□ -0.31
ATG4B-218ENST00000479554 SLC6A5Q9Y345 797 aa13.1□□□□□ -0.31
ATG4B-218ENST00000479554 INTS1Q8N201 2190 aaKnown RBP13.1□□□□□ -0.31
ATG4B-218ENST00000479554 NINQ8N4C6 2090 aa13.09□□□□□ -0.31
ATG4B-218ENST00000479554 FRG2CA6NGY1 282 aa13.09□□□□□ -0.31
ATG4B-218ENST00000479554 DRD2P14416 443 aa13.09□□□□□ -0.31
ATG4B-218ENST00000479554 POU3F2P20265 443 aaPredicted RBP13.09□□□□□ -0.31
ATG4B-218ENST00000479554 PTPN6P29350 595 aa13.09□□□□□ -0.31
ATG4B-218ENST00000479554 ALDH3A1P30838 453 aa13.09□□□□□ -0.31
ATG4B-218ENST00000479554 TIA1P31483 386 aaKnown RBP eCLIP13.09□□□□□ -0.31
ATG4B-218ENST00000479554 SOX18P35713 384 aa13.09□□□□□ -0.31
ATG4B-218ENST00000479554 EMDP50402 254 aa13.09□□□□□ -0.31
ATG4B-218ENST00000479554 RAE1P78406 368 aaKnown RBP13.09□□□□□ -0.31
ATG4B-218ENST00000479554 HMGCS1Q01581 520 aa13.09□□□□□ -0.31
ATG4B-218ENST00000479554 HEPACAMQ14CZ8 416 aa13.09□□□□□ -0.31
ATG4B-218ENST00000479554 PCLAFQ15004 111 aa13.09□□□□□ -0.31
ATG4B-218ENST00000479554 ZNF628Q5EBL2 1059 aa13.09□□□□□ -0.31
ATG4B-218ENST00000479554 WIPI1Q5MNZ9 446 aaPredicted RBP13.09□□□□□ -0.31
ATG4B-218ENST00000479554 TIGD3Q6B0B8 471 aa13.09□□□□□ -0.31
ATG4B-218ENST00000479554 DESI1Q6ICB0 168 aa13.09□□□□□ -0.31
ATG4B-218ENST00000479554 SLC30A6Q6NXT4 461 aa13.09□□□□□ -0.31
ATG4B-218ENST00000479554 SEM1Q6ZVN7 128 aa13.09□□□□□ -0.31
ATG4B-218ENST00000479554 NUP54Q7Z3B4 507 aa13.09□□□□□ -0.31
ATG4B-218ENST00000479554 SPATA21Q7Z572 469 aa13.09□□□□□ -0.31
ATG4B-218ENST00000479554 LACC1Q8IV20 430 aa13.09□□□□□ -0.31
ATG4B-218ENST00000479554 ZNF675Q8TD23 568 aa13.09□□□□□ -0.31
ATG4B-218ENST00000479554 HGDQ93099 445 aa13.09□□□□□ -0.31
ATG4B-218ENST00000479554 EXOSC8Q96B26 276 aaKnown RBP13.09□□□□□ -0.31
ATG4B-218ENST00000479554 APIPQ96GX9 242 aa13.09□□□□□ -0.31
ATG4B-218ENST00000479554 KCNA7Q96RP8 456 aa13.09□□□□□ -0.31
ATG4B-218ENST00000479554 NODALQ96S42 347 aa13.09□□□□□ -0.31
ATG4B-218ENST00000479554 TIMP4Q99727 224 aa13.09□□□□□ -0.31
ATG4B-218ENST00000479554 PRDM14Q9GZV8 571 aa13.09□□□□□ -0.31
ATG4B-218ENST00000479554 SLCO1B3Q9NPD5 702 aa13.09□□□□□ -0.31
ATG4B-218ENST00000479554 GIMAP4Q9NUV9 329 aa13.09□□□□□ -0.31
ATG4B-218ENST00000479554 L3MBTL1Q9Y468 752 aa13.09□□□□□ -0.31
ATG4B-218ENST00000479554 TIMM22Q9Y584 194 aa13.09□□□□□ -0.31
ATG4B-218ENST00000479554 ARHGAP21Q5T5U3 1957 aa13.09□□□□□ -0.31
ATG4B-218ENST00000479554 PRAMEF25A6NGN4 478 aa13.08□□□□□ -0.32
ATG4B-218ENST00000479554 G3V2L1 256 aa13.08□□□□□ -0.32
ATG4B-218ENST00000479554 DVL2O14641 736 aa13.08□□□□□ -0.32
ATG4B-218ENST00000479554 SNPHO15079 494 aa13.08□□□□□ -0.32
ATG4B-218ENST00000479554 ICOSLGO75144 302 aa13.08□□□□□ -0.32
ATG4B-218ENST00000479554 UGT2B11O75310 529 aa13.08□□□□□ -0.32
ATG4B-218ENST00000479554 BCAS2O75934 225 aaPredicted RBP13.08□□□□□ -0.32
ATG4B-218ENST00000479554 EPPINO95925 133 aa13.08□□□□□ -0.32
ATG4B-218ENST00000479554 SERPINE1P05121 402 aa13.08□□□□□ -0.32
ATG4B-218ENST00000479554 TROVE2P10155 538 aaKnown RBP eCLIP13.08□□□□□ -0.32
ATG4B-218ENST00000479554 MYL2P10916 166 aa13.08□□□□□ -0.32
ATG4B-218ENST00000479554 DRD5P21918 477 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms