RNA–Protein interactions for RNA: ENST00000479177.1

USP48-208, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-208ENST00000479177 QSOX2Q6ZRP7 698 aa6.21□□□□□ -1.42
USP48-208ENST00000479177 ZNF621Q6ZSS3 439 aa6.21□□□□□ -1.42
USP48-208ENST00000479177 NET1Q7Z628 596 aaPredicted RBP6.21□□□□□ -1.42
USP48-208ENST00000479177 CALHM3Q86XJ0 350 aa6.21□□□□□ -1.42
USP48-208ENST00000479177 HPS6Q86YV9 775 aa6.21□□□□□ -1.42
USP48-208ENST00000479177 LILRA2Q8N149 483 aa6.21□□□□□ -1.42
USP48-208ENST00000479177 CLEC4FQ8N1N0 589 aa6.21□□□□□ -1.42
USP48-208ENST00000479177 C10orf111Q8N326 155 aa6.21□□□□□ -1.42
USP48-208ENST00000479177 FBXW8Q8N3Y1 598 aa6.21□□□□□ -1.42
USP48-208ENST00000479177 TRIML2Q8N7C3 387 aa6.21□□□□□ -1.42
USP48-208ENST00000479177 RNF148Q8N7C7 305 aa6.21□□□□□ -1.42
USP48-208ENST00000479177 OR52N2Q8NGI0 321 aa6.21□□□□□ -1.42
USP48-208ENST00000479177 OR9A2Q8NGT5 310 aa6.21□□□□□ -1.42
USP48-208ENST00000479177 OR5AK3PQ8NH89 298 aa6.21□□□□□ -1.42
USP48-208ENST00000479177 WDR36Q8NI36 951 aaKnown RBP6.21□□□□□ -1.42
USP48-208ENST00000479177 ZNF675Q8TD23 568 aa6.21□□□□□ -1.42
USP48-208ENST00000479177 TSLPQ969D9 159 aa6.21□□□□□ -1.42
USP48-208ENST00000479177 FKBP10Q96AY3 582 aa6.21□□□□□ -1.42
USP48-208ENST00000479177 CCDC124Q96CT7 223 aaKnown RBP6.21□□□□□ -1.42
USP48-208ENST00000479177 CLIP3Q96DZ5 547 aa6.21□□□□□ -1.42
USP48-208ENST00000479177 NEURL3Q96EH8 262 aa6.21□□□□□ -1.42
USP48-208ENST00000479177 FAM120BQ96EK7 910 aaKnown RBP6.21□□□□□ -1.42
USP48-208ENST00000479177 LRFN5Q96NI6 719 aa6.21□□□□□ -1.42
USP48-208ENST00000479177 TAAR9Q96RI9 348 aa6.21□□□□□ -1.42
USP48-208ENST00000479177 JMJD8Q96S16 334 aa6.21□□□□□ -1.42
USP48-208ENST00000479177 SH3GL1Q99961 368 aa6.21□□□□□ -1.42
USP48-208ENST00000479177 ZPBPQ9BS86 351 aa6.21□□□□□ -1.42
USP48-208ENST00000479177 DDA1Q9BW61 102 aa6.21□□□□□ -1.42
USP48-208ENST00000479177 ULBP3Q9BZM4 244 aa6.21□□□□□ -1.42
USP48-208ENST00000479177 SLC7A5P2Q9GIP4 190 aa6.21□□□□□ -1.42
USP48-208ENST00000479177 CHST8Q9H2A9 424 aa6.21□□□□□ -1.42
USP48-208ENST00000479177 SLC26A1Q9H2B4 701 aa6.21□□□□□ -1.42
USP48-208ENST00000479177 KAT8Q9H7Z6 458 aaKnown RBP6.21□□□□□ -1.42
USP48-208ENST00000479177 TPT1P8Q9HAU6 139 aa6.21□□□□□ -1.42
USP48-208ENST00000479177 MKKSQ9NPJ1 570 aaPredicted RBP6.21□□□□□ -1.42
USP48-208ENST00000479177 NECTIN3Q9NQS3 549 aa6.21□□□□□ -1.42
USP48-208ENST00000479177 PRTFDC1Q9NRG1 225 aa6.21□□□□□ -1.42
USP48-208ENST00000479177 C14orf105Q9NVL8 296 aa6.21□□□□□ -1.42
USP48-208ENST00000479177 PCDHGB4Q9UN71 923 aa6.21□□□□□ -1.42
USP48-208ENST00000479177 AP3M1Q9Y2T2 418 aa6.21□□□□□ -1.42
USP48-208ENST00000479177 SF3B6Q9Y3B4 125 aaKnown RBP6.21□□□□□ -1.42
USP48-208ENST00000479177 L3MBTL1Q9Y468 752 aa6.21□□□□□ -1.42
USP48-208ENST00000479177 PCDHGA3Q9Y5H0 932 aa6.21□□□□□ -1.42
USP48-208ENST00000479177 B3GALT1Q9Y5Z6 326 aa6.21□□□□□ -1.42
USP48-208ENST00000479177 CCDC88CQ9P219 2028 aa6.21□□□□□ -1.42
USP48-208ENST00000479177 APC2O95996 2303 aa6.21□□□□□ -1.42
USP48-208ENST00000479177 NCOR2Q9Y618 2525 aa6.21□□□□□ -1.42
USP48-208ENST00000479177 IGF2RP11717 2491 aa6.2□□□□□ -1.42
USP48-208ENST00000479177 MYOCOSA0A1B0GUC4 107 aa6.2□□□□□ -1.42
USP48-208ENST00000479177 ANKRD34BA5PLL1 514 aa6.2□□□□□ -1.42
USP48-208ENST00000479177 OR2W5A6NFC9 320 aa6.2□□□□□ -1.42
USP48-208ENST00000479177 VSTM2BA6NLU5 285 aa6.2□□□□□ -1.42
USP48-208ENST00000479177 A8MUI8 341 aa6.2□□□□□ -1.42
USP48-208ENST00000479177 EVPLLA8MZ36 301 aa6.2□□□□□ -1.42
USP48-208ENST00000479177 CLIC1O00299 241 aa6.2□□□□□ -1.42
USP48-208ENST00000479177 PLOD2O00469 737 aa6.2□□□□□ -1.42
USP48-208ENST00000479177 TBX1O43435 398 aa6.2□□□□□ -1.42
USP48-208ENST00000479177 CNOT3O75175 753 aaKnown RBP6.2□□□□□ -1.42
USP48-208ENST00000479177 PPM1BO75688 479 aa6.2□□□□□ -1.42
USP48-208ENST00000479177 CIB2O75838 187 aa6.2□□□□□ -1.42
USP48-208ENST00000479177 PSMG1O95456 288 aa6.2□□□□□ -1.42
USP48-208ENST00000479177 C1QTNF9P0C862 333 aa6.2□□□□□ -1.42
USP48-208ENST00000479177 JMJD7P0C870 316 aa6.2□□□□□ -1.42
USP48-208ENST00000479177 CEACAM1P13688 526 aa6.2□□□□□ -1.42
USP48-208ENST00000479177 GPX2P18283 190 aa6.2□□□□□ -1.42
USP48-208ENST00000479177 ME2P23368 584 aa6.2□□□□□ -1.42
USP48-208ENST00000479177 MPIP34949 423 aa6.2□□□□□ -1.42
USP48-208ENST00000479177 STT3AP46977 705 aa6.2□□□□□ -1.42
USP48-208ENST00000479177 MAPK10P53779 464 aa6.2□□□□□ -1.42
USP48-208ENST00000479177 OR4D2P58180 307 aa6.2□□□□□ -1.42
USP48-208ENST00000479177 DCDP81605 110 aaKnown RBP6.2□□□□□ -1.42
USP48-208ENST00000479177 MGAT2Q10469 447 aa6.2□□□□□ -1.42
USP48-208ENST00000479177 BNIP2Q12982 314 aa6.2□□□□□ -1.42
USP48-208ENST00000479177 FADDQ13158 208 aa6.2□□□□□ -1.42
USP48-208ENST00000479177 SLC13A2Q13183 592 aa6.2□□□□□ -1.42
USP48-208ENST00000479177 SERTAD2Q14140 314 aa6.2□□□□□ -1.42
USP48-208ENST00000479177 ERV3-1Q14264 604 aa6.2□□□□□ -1.42
USP48-208ENST00000479177 RGNQ15493 299 aa6.2□□□□□ -1.42
USP48-208ENST00000479177 SPDYE7PQ495Y7 208 aa6.2□□□□□ -1.42
USP48-208ENST00000479177 C3orf38Q5JPI3 329 aa6.2□□□□□ -1.42
USP48-208ENST00000479177 DDX59Q5T1V6 619 aaKnown RBP eCLIP6.2□□□□□ -1.42
USP48-208ENST00000479177 DCAF12Q5T6F0 453 aa6.2□□□□□ -1.42
USP48-208ENST00000479177 C1orf146Q5VVC0 180 aa6.2□□□□□ -1.42
USP48-208ENST00000479177 LCN10Q6JVE6 187 aa6.2□□□□□ -1.42
USP48-208ENST00000479177 FAM111BQ6SJ93 734 aa6.2□□□□□ -1.42
USP48-208ENST00000479177 ZNF517Q6ZMY9 492 aaPredicted RBP6.2□□□□□ -1.42
USP48-208ENST00000479177 DGAT2L6Q6ZPD8 337 aa6.2□□□□□ -1.42
USP48-208ENST00000479177 OVCH1Q7RTY7 1134 aa6.2□□□□□ -1.42
USP48-208ENST00000479177 TMPRSS12Q86WS5 348 aa6.2□□□□□ -1.42
USP48-208ENST00000479177 ST13P4Q8IZP2 240 aaPredicted RBP6.2□□□□□ -1.42
USP48-208ENST00000479177 OR2L13Q8N349 312 aa6.2□□□□□ -1.42
USP48-208ENST00000479177 FAM156AQ8NDB6 213 aa6.2□□□□□ -1.42
USP48-208ENST00000479177 OR7G2Q8NG99 324 aa6.2□□□□□ -1.42
USP48-208ENST00000479177 OR56A1Q8NGH5 318 aa6.2□□□□□ -1.42
USP48-208ENST00000479177 OR10A6Q8NH74 314 aa6.2□□□□□ -1.42
USP48-208ENST00000479177 STT3BQ8TCJ2 826 aa6.2□□□□□ -1.42
USP48-208ENST00000479177 PNPT1Q8TCS8 783 aaKnown RBP6.2□□□□□ -1.42
USP48-208ENST00000479177 KAT2AQ92830 837 aa6.2□□□□□ -1.42
USP48-208ENST00000479177 MOAP1Q96BY2 351 aa6.2□□□□□ -1.42
USP48-208ENST00000479177 ASB9Q96DX5 294 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms