RNA–Protein interactions for RNA: ENST00000478746.1

VIM-204, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 757 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-204ENST00000478746 RNF122Q9H9V4 155 aa15.47■□□□□ 0.07
VIM-204ENST00000478746 CXorf49A8MYA2 514 aaPredicted RBP15.46■□□□□ 0.07
VIM-204ENST00000478746 FOXE1O00358 373 aaPredicted RBP15.46■□□□□ 0.07
VIM-204ENST00000478746 PHF1O43189 567 aaPredicted RBP15.46■□□□□ 0.07
VIM-204ENST00000478746 KLK1P06870 262 aa15.46■□□□□ 0.07
VIM-204ENST00000478746 DEKP35659 375 aaKnown RBP15.46■□□□□ 0.07
VIM-204ENST00000478746 FEN1P39748 380 aaKnown RBP15.46■□□□□ 0.07
VIM-204ENST00000478746 CLDN15P56746 228 aa15.46■□□□□ 0.07
VIM-204ENST00000478746 B3GALT5-AS1P59052 145 aa15.46■□□□□ 0.07
VIM-204ENST00000478746 RAB10P61026 200 aa15.46■□□□□ 0.07
VIM-204ENST00000478746 OR52R1Q8NGF1 315 aa15.46■□□□□ 0.07
VIM-204ENST00000478746 AKAP1Q92667 903 aaKnown RBP eCLIP15.46■□□□□ 0.07
VIM-204ENST00000478746 ATOH8Q96SQ7 321 aa15.46■□□□□ 0.07
VIM-204ENST00000478746 SERPINI1Q99574 410 aa15.46■□□□□ 0.07
VIM-204ENST00000478746 NMRAL1Q9HBL8 299 aa15.46■□□□□ 0.07
VIM-204ENST00000478746 MAT2BQ9NZL9 334 aa15.46■□□□□ 0.07
VIM-204ENST00000478746 PRODH2Q9UF12 536 aa15.46■□□□□ 0.07
VIM-204ENST00000478746 ZNF639Q9UID6 485 aa15.46■□□□□ 0.07
VIM-204ENST00000478746 PLLPQ9Y342 182 aa15.46■□□□□ 0.07
VIM-204ENST00000478746 CR1P17927 2039 aa15.46■□□□□ 0.07
VIM-204ENST00000478746 GOLGA6L10A6NI86 522 aa15.45■□□□□ 0.06
VIM-204ENST00000478746 TO15178 435 aa15.45■□□□□ 0.06
VIM-204ENST00000478746 KERAO60938 352 aa15.45■□□□□ 0.06
VIM-204ENST00000478746 GRK2P25098 689 aa15.45■□□□□ 0.06
VIM-204ENST00000478746 SUCLG1P53597 346 aaKnown RBP15.45■□□□□ 0.06
VIM-204ENST00000478746 DSCR4P56555 118 aaPredicted RBP15.45■□□□□ 0.06
VIM-204ENST00000478746 OCRLQ01968 901 aa15.45■□□□□ 0.06
VIM-204ENST00000478746 TRMT12Q53H54 448 aaKnown RBP15.45■□□□□ 0.06
VIM-204ENST00000478746 FAM214BQ7L5A3 538 aa15.45■□□□□ 0.06
VIM-204ENST00000478746 GBP7Q8N8V2 638 aaPredicted RBP15.45■□□□□ 0.06
VIM-204ENST00000478746 OR4K17Q8NGC6 315 aa15.45■□□□□ 0.06
VIM-204ENST00000478746 FNDC9Q8TBE3 224 aa15.45■□□□□ 0.06
VIM-204ENST00000478746 WDR20Q8TBZ3 569 aa15.45■□□□□ 0.06
VIM-204ENST00000478746 CDKL2Q92772 493 aa15.45■□□□□ 0.06
VIM-204ENST00000478746 ZBED6CLQ96FA7 236 aaPredicted RBP15.45■□□□□ 0.06
VIM-204ENST00000478746 ADOQ96SZ5 270 aa15.45■□□□□ 0.06
VIM-204ENST00000478746 RBBP8Q99708 897 aa15.45■□□□□ 0.06
VIM-204ENST00000478746 CPNE1Q99829 537 aa15.45■□□□□ 0.06
VIM-204ENST00000478746 LRRC1Q9BTT6 524 aa15.45■□□□□ 0.06
VIM-204ENST00000478746 RNF11Q9Y3C5 154 aa15.45■□□□□ 0.06
VIM-204ENST00000478746 ZNF175Q9Y473 711 aa15.45■□□□□ 0.06
VIM-204ENST00000478746 UQCRHLA0A096LP55 91 aa15.44■□□□□ 0.06
VIM-204ENST00000478746 A8MV72 311 aaPredicted RBP15.44■□□□□ 0.06
VIM-204ENST00000478746 H0YC42 278 aa15.44■□□□□ 0.06
VIM-204ENST00000478746 OVOL3O00110 214 aa15.44■□□□□ 0.06
VIM-204ENST00000478746 UGDHO60701 494 aa15.44■□□□□ 0.06
VIM-204ENST00000478746 ERAL1O75616 437 aaKnown RBP15.44■□□□□ 0.06
VIM-204ENST00000478746 SEMA3DO95025 777 aa15.44■□□□□ 0.06
VIM-204ENST00000478746 CBX7O95931 251 aa15.44■□□□□ 0.06
VIM-204ENST00000478746 ATP1B1P05026 303 aa15.44■□□□□ 0.06
VIM-204ENST00000478746 CSNK2A2P19784 350 aaPredicted RBP15.44■□□□□ 0.06
VIM-204ENST00000478746 EMDP50402 254 aa15.44■□□□□ 0.06
VIM-204ENST00000478746 TPD52P55327 224 aaPredicted RBP15.44■□□□□ 0.06
VIM-204ENST00000478746 GPX6P59796 221 aa15.44■□□□□ 0.06
VIM-204ENST00000478746 DLG1Q12959 904 aa15.44■□□□□ 0.06
VIM-204ENST00000478746 EFR3AQ14156 821 aa15.44■□□□□ 0.06
VIM-204ENST00000478746 SLMAPQ14BN4 828 aa15.44■□□□□ 0.06
VIM-204ENST00000478746 PON3Q15166 354 aa15.44■□□□□ 0.06
VIM-204ENST00000478746 ZKSCAN8Q15776 578 aaPredicted RBP15.44■□□□□ 0.06
VIM-204ENST00000478746 CCNYL2Q5T2Q4 361 aa15.44■□□□□ 0.06
VIM-204ENST00000478746 RAPH1Q70E73 1250 aa15.44■□□□□ 0.06
VIM-204ENST00000478746 WFDC8Q8IUA0 241 aa15.44■□□□□ 0.06
VIM-204ENST00000478746 ZBED8Q8IZ13 594 aa15.44■□□□□ 0.06
VIM-204ENST00000478746 SLC35A4Q96G79 324 aa15.44■□□□□ 0.06
VIM-204ENST00000478746 TMEM204Q9BSN7 226 aa15.44■□□□□ 0.06
VIM-204ENST00000478746 PLSCR4Q9NRQ2 329 aa15.44■□□□□ 0.06
VIM-204ENST00000478746 AHSPQ9NZD4 102 aa15.44■□□□□ 0.06
VIM-204ENST00000478746 CES1P1Q9UKY3 287 aa15.44■□□□□ 0.06
VIM-204ENST00000478746 GPR55Q9Y2T6 319 aaPredicted RBP15.44■□□□□ 0.06
VIM-204ENST00000478746 ZNF337Q9Y3M9 751 aa15.44■□□□□ 0.06
VIM-204ENST00000478746 E7ESA3 106 aa15.43■□□□□ 0.06
VIM-204ENST00000478746 SEC14L5O43304 696 aa15.43■□□□□ 0.06
VIM-204ENST00000478746 GUCY1B2O75343 617 aa15.43■□□□□ 0.06
VIM-204ENST00000478746 HK1P19367 917 aa15.43■□□□□ 0.06
VIM-204ENST00000478746 KRT20P35900 424 aa15.43■□□□□ 0.06
VIM-204ENST00000478746 PIK3CGP48736 1102 aa15.43■□□□□ 0.06
VIM-204ENST00000478746 GUSBP1Q15486 140 aa15.43■□□□□ 0.06
VIM-204ENST00000478746 RAET1LQ5VY80 246 aa15.43■□□□□ 0.06
VIM-204ENST00000478746 SLC48A1Q6P1K1 146 aa15.43■□□□□ 0.06
VIM-204ENST00000478746 STAC2Q6ZMT1 411 aa15.43■□□□□ 0.06
VIM-204ENST00000478746 PAGE2Q7Z2X7 111 aa15.43■□□□□ 0.06
VIM-204ENST00000478746 TBC1D1Q86TI0 1168 aaPredicted RBP15.43■□□□□ 0.06
VIM-204ENST00000478746 SLC35F6Q8N357 371 aa15.43■□□□□ 0.06
VIM-204ENST00000478746 GTPBP3Q969Y2 492 aaKnown RBP15.43■□□□□ 0.06
VIM-204ENST00000478746 DSN1Q9H410 356 aa15.43■□□□□ 0.06
VIM-204ENST00000478746 IPPKQ9H8X2 491 aa15.43■□□□□ 0.06
VIM-204ENST00000478746 ADAM29Q9UKF5 820 aa15.43■□□□□ 0.06
VIM-204ENST00000478746 PSME2Q9UL46 239 aa15.43■□□□□ 0.06
VIM-204ENST00000478746 SNX12Q9UMY4 172 aa15.43■□□□□ 0.06
VIM-204ENST00000478746 PCDHA9Q9Y5H5 950 aa15.43■□□□□ 0.06
VIM-204ENST00000478746 PRR14LQ5THK1 2151 aa15.43■□□□□ 0.06
VIM-204ENST00000478746 C1orf226A1L170 272 aa15.42■□□□□ 0.06
VIM-204ENST00000478746 SYCE1LA8MT33 242 aa15.42■□□□□ 0.06
VIM-204ENST00000478746 B4DXG7 233 aa15.42■□□□□ 0.06
VIM-204ENST00000478746 TSPAN2O60636 221 aa15.42■□□□□ 0.06
VIM-204ENST00000478746 SEC31AO94979 1220 aaKnown RBP15.42■□□□□ 0.06
VIM-204ENST00000478746 ALDOAP04075 364 aaKnown RBP15.42■□□□□ 0.06
VIM-204ENST00000478746 LTA4HP09960 611 aaKnown RBP15.42■□□□□ 0.06
VIM-204ENST00000478746 MTHFD2P13995 350 aa15.42■□□□□ 0.06
VIM-204ENST00000478746 PCSK2P16519 638 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms