RNA–Protein interactions for RNA: ENST00000478573.6

CDC42BPA-212, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-212ENST00000478573 PLCL2Q9UPR0 1127 aa3.37□□□□□ -1.87
CDC42BPA-212ENST00000478573 OR1A2Q9Y585 309 aa3.37□□□□□ -1.87
CDC42BPA-212ENST00000478573 TRIOBPQ9H2D6 2365 aa3.37□□□□□ -1.87
CDC42BPA-212ENST00000478573 LOC105371242A0A075B767 164 aa3.36□□□□□ -1.87
CDC42BPA-212ENST00000478573 ARHGAP42A6NI28 874 aa3.36□□□□□ -1.87
CDC42BPA-212ENST00000478573 A8MU76 341 aa3.36□□□□□ -1.87
CDC42BPA-212ENST00000478573 G3V2L1 256 aa3.36□□□□□ -1.87
CDC42BPA-212ENST00000478573 ARPC1BO15143 372 aaKnown RBP3.36□□□□□ -1.87
CDC42BPA-212ENST00000478573 LRP3O75074 770 aa3.36□□□□□ -1.87
CDC42BPA-212ENST00000478573 FLOT1O75955 427 aa3.36□□□□□ -1.87
CDC42BPA-212ENST00000478573 SORBS2O94875 1100 aaKnown RBP3.36□□□□□ -1.87
CDC42BPA-212ENST00000478573 NDUFB10O96000 172 aa3.36□□□□□ -1.87
CDC42BPA-212ENST00000478573 RPLP0P05388 317 aaKnown RBP3.36□□□□□ -1.87
CDC42BPA-212ENST00000478573 PGK2P07205 417 aa3.36□□□□□ -1.87
CDC42BPA-212ENST00000478573 CYBAP13498 195 aa3.36□□□□□ -1.87
CDC42BPA-212ENST00000478573 GPX3P22352 226 aa3.36□□□□□ -1.87
CDC42BPA-212ENST00000478573 PRKACGP22612 351 aa3.36□□□□□ -1.87
CDC42BPA-212ENST00000478573 ATXN3P54252 364 aaPredicted RBP3.36□□□□□ -1.87
CDC42BPA-212ENST00000478573 SSTP61278 116 aa3.36□□□□□ -1.87
CDC42BPA-212ENST00000478573 ERVK-16P61578 105 aa3.36□□□□□ -1.87
CDC42BPA-212ENST00000478573 RIGQ13278 110 aa3.36□□□□□ -1.87
CDC42BPA-212ENST00000478573 SMC1AQ14683 1233 aaKnown RBP3.36□□□□□ -1.87
CDC42BPA-212ENST00000478573 KRT31Q15323 416 aa3.36□□□□□ -1.87
CDC42BPA-212ENST00000478573 MPPE1Q53F39 396 aa3.36□□□□□ -1.87
CDC42BPA-212ENST00000478573 C1orf189Q5VU69 101 aa3.36□□□□□ -1.87
CDC42BPA-212ENST00000478573 MFSD14CQ5VZR4 134 aa3.36□□□□□ -1.87
CDC42BPA-212ENST00000478573 MFSD7Q6UXD7 560 aa3.36□□□□□ -1.87
CDC42BPA-212ENST00000478573 ZNF589Q86UQ0 364 aaPredicted RBP3.36□□□□□ -1.87
CDC42BPA-212ENST00000478573 OR4N5Q8IXE1 308 aa3.36□□□□□ -1.87
CDC42BPA-212ENST00000478573 ELMOD2Q8IZ81 293 aa3.36□□□□□ -1.87
CDC42BPA-212ENST00000478573 KDM8Q8N371 416 aa3.36□□□□□ -1.87
CDC42BPA-212ENST00000478573 ZNF614Q8N883 585 aa3.36□□□□□ -1.87
CDC42BPA-212ENST00000478573 CCDC197Q8NCU1 140 aa3.36□□□□□ -1.87
CDC42BPA-212ENST00000478573 CCNYQ8ND76 341 aa3.36□□□□□ -1.87
CDC42BPA-212ENST00000478573 CNNM3Q8NE01 707 aa3.36□□□□□ -1.87
CDC42BPA-212ENST00000478573 NUP37Q8NFH4 326 aa3.36□□□□□ -1.87
CDC42BPA-212ENST00000478573 TET1Q8NFU7 2136 aa3.36□□□□□ -1.87
CDC42BPA-212ENST00000478573 OR4L1Q8NH43 312 aa3.36□□□□□ -1.87
CDC42BPA-212ENST00000478573 ZNF519Q8TB69 540 aa3.36□□□□□ -1.87
CDC42BPA-212ENST00000478573 U2AF1L4Q8WU68 220 aaKnown RBP3.36□□□□□ -1.87
CDC42BPA-212ENST00000478573 C11orf52Q96A22 123 aa3.36□□□□□ -1.87
CDC42BPA-212ENST00000478573 RAB39BQ96DA2 213 aa3.36□□□□□ -1.87
CDC42BPA-212ENST00000478573 RAB40CQ96S21 281 aa3.36□□□□□ -1.87
CDC42BPA-212ENST00000478573 VGLL1Q99990 258 aa3.36□□□□□ -1.87
CDC42BPA-212ENST00000478573 TEX13BQ9BXU2 312 aa3.36□□□□□ -1.87
CDC42BPA-212ENST00000478573 DGCR6LQ9BY27 220 aa3.36□□□□□ -1.87
CDC42BPA-212ENST00000478573 WWP1Q9H0M0 922 aa3.36□□□□□ -1.87
CDC42BPA-212ENST00000478573 RNF41Q9H4P4 317 aaPredicted RBP3.36□□□□□ -1.87
CDC42BPA-212ENST00000478573 HOXC10Q9NYD6 342 aa3.36□□□□□ -1.87
CDC42BPA-212ENST00000478573 MRPS18CQ9Y3D5 142 aaKnown RBP3.36□□□□□ -1.87
CDC42BPA-212ENST00000478573 MTF2Q9Y483 593 aaPredicted RBP3.36□□□□□ -1.87
CDC42BPA-212ENST00000478573 MKI67P46013 3256 aaKnown RBP3.36□□□□□ -1.87
CDC42BPA-212ENST00000478573 MYO9BQ13459 2157 aa3.36□□□□□ -1.87
CDC42BPA-212ENST00000478573 WDR19Q8NEZ3 1342 aa3.36□□□□□ -1.87
CDC42BPA-212ENST00000478573 ZNF318Q5VUA4 2279 aa3.36□□□□□ -1.87
CDC42BPA-212ENST00000478573 PDCD11Q14690 1871 aaKnown RBP3.35□□□□□ -1.87
CDC42BPA-212ENST00000478573 CFAP73A6NFT4 308 aa3.35□□□□□ -1.87
CDC42BPA-212ENST00000478573 CCDC69A6NI79 296 aa3.35□□□□□ -1.87
CDC42BPA-212ENST00000478573 SHISA7A6NL88 538 aa3.35□□□□□ -1.87
CDC42BPA-212ENST00000478573 EEF2KO00418 725 aaKnown RBP3.35□□□□□ -1.87
CDC42BPA-212ENST00000478573 GMNNO75496 209 aa3.35□□□□□ -1.87
CDC42BPA-212ENST00000478573 APRTP07741 180 aa3.35□□□□□ -1.87
CDC42BPA-212ENST00000478573 TPBGLP0DKB5 382 aa3.35□□□□□ -1.87
CDC42BPA-212ENST00000478573 CCDC192P0DO97 292 aa3.35□□□□□ -1.87
CDC42BPA-212ENST00000478573 HSPD1P10809 573 aaKnown RBP3.35□□□□□ -1.87
CDC42BPA-212ENST00000478573 SELEP16581 610 aa3.35□□□□□ -1.87
CDC42BPA-212ENST00000478573 ZFP36L2P47974 494 aaKnown RBP3.35□□□□□ -1.87
CDC42BPA-212ENST00000478573 PITPNBP48739 271 aa3.35□□□□□ -1.87
CDC42BPA-212ENST00000478573 NDST2P52849 883 aa3.35□□□□□ -1.87
CDC42BPA-212ENST00000478573 CRYBA2P53672 197 aa3.35□□□□□ -1.87
CDC42BPA-212ENST00000478573 GEMP55040 296 aa3.35□□□□□ -1.87
CDC42BPA-212ENST00000478573 HERV-K104P63124 156 aa3.35□□□□□ -1.87
CDC42BPA-212ENST00000478573 DHODHQ02127 395 aa3.35□□□□□ -1.87
CDC42BPA-212ENST00000478573 TTC31Q49AM3 519 aaPredicted RBP3.35□□□□□ -1.87
CDC42BPA-212ENST00000478573 CCDC40Q4G0X9 1142 aa3.35□□□□□ -1.87
CDC42BPA-212ENST00000478573 BSPRYQ5W0U4 402 aa3.35□□□□□ -1.87
CDC42BPA-212ENST00000478573 CDHR3Q6ZTQ4 885 aa3.35□□□□□ -1.87
CDC42BPA-212ENST00000478573 CENPQQ7L2Z9 268 aaPredicted RBP3.35□□□□□ -1.87
CDC42BPA-212ENST00000478573 TAF8Q7Z7C8 310 aa3.35□□□□□ -1.87
CDC42BPA-212ENST00000478573 P2RY8Q86VZ1 359 aa3.35□□□□□ -1.87
CDC42BPA-212ENST00000478573 OR6F1Q8NGZ6 308 aa3.35□□□□□ -1.87
CDC42BPA-212ENST00000478573 ESR2Q92731 530 aa3.35□□□□□ -1.87
CDC42BPA-212ENST00000478573 MRPL53Q96EL3 112 aaKnown RBP3.35□□□□□ -1.87
CDC42BPA-212ENST00000478573 CNRIP1Q96F85 164 aaPredicted RBP3.35□□□□□ -1.87
CDC42BPA-212ENST00000478573 RPGRIP1Q96KN7 1286 aa3.35□□□□□ -1.87
CDC42BPA-212ENST00000478573 NSMCE2Q96MF7 247 aa3.35□□□□□ -1.87
CDC42BPA-212ENST00000478573 RUNDC3BQ96NL0 473 aa3.35□□□□□ -1.87
CDC42BPA-212ENST00000478573 FAM111AQ96PZ2 611 aa3.35□□□□□ -1.87
CDC42BPA-212ENST00000478573 FTHL17Q9BXU8 183 aa3.35□□□□□ -1.87
CDC42BPA-212ENST00000478573 KRT23Q9C075 422 aa3.35□□□□□ -1.87
CDC42BPA-212ENST00000478573 SLC26A1Q9H2B4 701 aa3.35□□□□□ -1.87
CDC42BPA-212ENST00000478573 SLC38A10Q9HBR0 1119 aa3.35□□□□□ -1.87
CDC42BPA-212ENST00000478573 B3GAT2Q9NPZ5 323 aa3.35□□□□□ -1.87
CDC42BPA-212ENST00000478573 SPHK2Q9NRA0 654 aa3.35□□□□□ -1.87
CDC42BPA-212ENST00000478573 ZDHHC18Q9NUE0 388 aa3.35□□□□□ -1.87
CDC42BPA-212ENST00000478573 NDE1Q9NXR1 346 aa3.35□□□□□ -1.87
CDC42BPA-212ENST00000478573 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP3.35□□□□□ -1.87
CDC42BPA-212ENST00000478573 NLGN3Q9NZ94 848 aa3.35□□□□□ -1.87
CDC42BPA-212ENST00000478573 SPASTQ9UBP0 616 aa3.35□□□□□ -1.87
CDC42BPA-212ENST00000478573 FAM153AQ9UHL3 310 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms