RNA–Protein interactions for RNA: ENST00000478075.1

CALD1-218, Transcript of caldesmon 1, humanhuman

TSL 3

Gene CALD1, Length 193 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-218ENST00000478075 DNAJA4Q8WW22 397 aaPredicted RBP-0.04□□□□□ -2.42
CALD1-218ENST00000478075 EXT2Q93063 718 aa-0.04□□□□□ -2.42
CALD1-218ENST00000478075 C18orf25Q96B23 403 aaPredicted RBP-0.04□□□□□ -2.42
CALD1-218ENST00000478075 PDXPQ96GD0 296 aa-0.04□□□□□ -2.42
CALD1-218ENST00000478075 OR2M2Q96R28 347 aa-0.04□□□□□ -2.42
CALD1-218ENST00000478075 STACQ99469 402 aa-0.04□□□□□ -2.42
CALD1-218ENST00000478075 NPAS2Q99743 824 aa-0.04□□□□□ -2.42
CALD1-218ENST00000478075 TM2D1Q9BX74 207 aa-0.04□□□□□ -2.42
CALD1-218ENST00000478075 NUSAP1Q9BXS6 441 aaKnown RBP-0.04□□□□□ -2.42
CALD1-218ENST00000478075 PLEK2Q9NYT0 353 aa-0.04□□□□□ -2.42
CALD1-218ENST00000478075 PLXNB1O43157 2135 aa-0.04□□□□□ -2.42
CALD1-218ENST00000478075 PIKFYVEQ9Y2I7 2098 aa-0.04□□□□□ -2.42
CALD1-218ENST00000478075 FSIP2Q5CZC0 6907 aa-0.05□□□□□ -2.42
CALD1-218ENST00000478075 PFASO15067 1338 aa-0.05□□□□□ -2.42
CALD1-218ENST00000478075 IGLV3-12A0A075B6K2 115 aa-0.05□□□□□ -2.42
CALD1-218ENST00000478075 ATP6AP2A0A1C7CYW4 349 aa-0.05□□□□□ -2.42
CALD1-218ENST00000478075 GTPBP10A4D1E9 387 aaKnown RBP-0.05□□□□□ -2.42
CALD1-218ENST00000478075 MEI4A8MW99 385 aa-0.05□□□□□ -2.42
CALD1-218ENST00000478075 RRP8O43159 456 aaKnown RBP-0.05□□□□□ -2.42
CALD1-218ENST00000478075 EFNA2O43921 213 aa-0.05□□□□□ -2.42
CALD1-218ENST00000478075 TSPAN9O75954 239 aa-0.05□□□□□ -2.42
CALD1-218ENST00000478075 VCPP55072 806 aaKnown RBP-0.05□□□□□ -2.42
CALD1-218ENST00000478075 DCAF7P61962 342 aa-0.05□□□□□ -2.42
CALD1-218ENST00000478075 MPP1Q00013 466 aa-0.05□□□□□ -2.42
CALD1-218ENST00000478075 EWSR1Q01844 656 aaKnown RBP eCLIP-0.05□□□□□ -2.42
CALD1-218ENST00000478075 SHROOM1Q2M3G4 852 aaPredicted RBP-0.05□□□□□ -2.42
CALD1-218ENST00000478075 SPOUT1Q5T280 376 aaKnown RBP-0.05□□□□□ -2.42
CALD1-218ENST00000478075 DDI2Q5TDH0 399 aa-0.05□□□□□ -2.42
CALD1-218ENST00000478075 ITIH5Q86UX2 942 aa-0.05□□□□□ -2.42
CALD1-218ENST00000478075 MEX3DQ86XN8 651 aaKnown RBP-0.05□□□□□ -2.42
CALD1-218ENST00000478075 SYT14Q8NB59 555 aa-0.05□□□□□ -2.42
CALD1-218ENST00000478075 GIMAP1Q8WWP7 306 aa-0.05□□□□□ -2.42
CALD1-218ENST00000478075 MCHR2Q969V1 340 aa-0.05□□□□□ -2.42
CALD1-218ENST00000478075 HAVCR1Q96D42 359 aa-0.05□□□□□ -2.42
CALD1-218ENST00000478075 VPS39Q96JC1 886 aa-0.05□□□□□ -2.42
CALD1-218ENST00000478075 LINC00615Q96LM1 132 aaPredicted RBP-0.05□□□□□ -2.42
CALD1-218ENST00000478075 GPR61Q9BZJ8 451 aa-0.05□□□□□ -2.42
CALD1-218ENST00000478075 CXXC4Q9H2H0 198 aa-0.05□□□□□ -2.42
CALD1-218ENST00000478075 MINDY3Q9H8M7 445 aa-0.05□□□□□ -2.42
CALD1-218ENST00000478075 IL1RAPL2Q9NP60 686 aa-0.05□□□□□ -2.42
CALD1-218ENST00000478075 PIGVQ9NUD9 493 aa-0.05□□□□□ -2.42
CALD1-218ENST00000478075 GDAP2Q9NXN4 497 aa-0.05□□□□□ -2.42
CALD1-218ENST00000478075 DUSP12Q9UNI6 340 aa-0.05□□□□□ -2.42
CALD1-218ENST00000478075 IFT52Q9Y366 437 aa-0.05□□□□□ -2.42
CALD1-218ENST00000478075 ANKRD30BQ9BXX2 1392 aa-0.06□□□□□ -2.42
CALD1-218ENST00000478075 AFF2P51816 1311 aa-0.06□□□□□ -2.42
CALD1-218ENST00000478075 A0A0A6YYC8 382 aaPredicted RBP-0.06□□□□□ -2.42
CALD1-218ENST00000478075 YJEFN3A6XGL0 299 aa-0.06□□□□□ -2.42
CALD1-218ENST00000478075 VGLL3A8MV65 326 aa-0.06□□□□□ -2.42
CALD1-218ENST00000478075 I3L1I5 382 aaPredicted RBP-0.06□□□□□ -2.42
CALD1-218ENST00000478075 AGR2O95994 175 aa-0.06□□□□□ -2.42
CALD1-218ENST00000478075 CSH1P0DML2 217 aa-0.06□□□□□ -2.42
CALD1-218ENST00000478075 CSH2P0DML3 217 aa-0.06□□□□□ -2.42
CALD1-218ENST00000478075 ALOX12P18054 663 aa-0.06□□□□□ -2.42
CALD1-218ENST00000478075 SAA4P35542 130 aa-0.06□□□□□ -2.42
CALD1-218ENST00000478075 GMPSP49915 693 aaPredicted RBP-0.06□□□□□ -2.42
CALD1-218ENST00000478075 ZNF85Q03923 595 aa-0.06□□□□□ -2.42
CALD1-218ENST00000478075 KLHL30Q0D2K2 578 aa-0.06□□□□□ -2.42
CALD1-218ENST00000478075 GK2Q14410 553 aaPredicted RBP-0.06□□□□□ -2.42
CALD1-218ENST00000478075 CAMK4Q16566 473 aa-0.06□□□□□ -2.42
CALD1-218ENST00000478075 CMPK2Q5EBM0 449 aa-0.06□□□□□ -2.42
CALD1-218ENST00000478075 SAXO2Q658L1 398 aa-0.06□□□□□ -2.42
CALD1-218ENST00000478075 PHLDB2Q86SQ0 1253 aa-0.06□□□□□ -2.42
CALD1-218ENST00000478075 LUZP1Q86V48 1076 aa-0.06□□□□□ -2.42
CALD1-218ENST00000478075 WDR49Q8IV35 697 aa-0.06□□□□□ -2.42
CALD1-218ENST00000478075 UBALD2Q8IYN6 164 aa-0.06□□□□□ -2.42
CALD1-218ENST00000478075 SMYD1Q8NB12 490 aa-0.06□□□□□ -2.42
CALD1-218ENST00000478075 TRPV3Q8NET8 790 aa-0.06□□□□□ -2.42
CALD1-218ENST00000478075 TMEM158Q8WZ71 300 aa-0.06□□□□□ -2.42
CALD1-218ENST00000478075 OR10C1Q96KK4 312 aa-0.06□□□□□ -2.42
CALD1-218ENST00000478075 GCNAQ96QF7 691 aa-0.06□□□□□ -2.42
CALD1-218ENST00000478075 TXN2Q99757 166 aa-0.06□□□□□ -2.42
CALD1-218ENST00000478075 IFI27L2Q9H2X8 130 aa-0.06□□□□□ -2.42
CALD1-218ENST00000478075 OR1A2Q9Y585 309 aa-0.06□□□□□ -2.42
CALD1-218ENST00000478075 COL22A1Q8NFW1 1626 aaPredicted RBP-0.06□□□□□ -2.42
CALD1-218ENST00000478075 TET2Q6N021 2002 aaPredicted RBP-0.06□□□□□ -2.42
CALD1-218ENST00000478075 IGSF9BQ9UPX0 1349 aa-0.07□□□□□ -2.42
CALD1-218ENST00000478075 NPIPA5A0A0B4J1W7 369 aa-0.07□□□□□ -2.42
CALD1-218ENST00000478075 ANKDD1BA6NHY2 528 aa-0.07□□□□□ -2.42
CALD1-218ENST00000478075 NPIPA5E9PKD4 350 aa-0.07□□□□□ -2.42
CALD1-218ENST00000478075 M0R296 226 aa-0.07□□□□□ -2.42
CALD1-218ENST00000478075 LAD1O00515 517 aa-0.07□□□□□ -2.42
CALD1-218ENST00000478075 CABYRO75952 493 aa-0.07□□□□□ -2.42
CALD1-218ENST00000478075 PDE5AO76074 875 aa-0.07□□□□□ -2.42
CALD1-218ENST00000478075 OAS1P00973 400 aaKnown RBP-0.07□□□□□ -2.42
CALD1-218ENST00000478075 GHRP10912 638 aa-0.07□□□□□ -2.42
CALD1-218ENST00000478075 TCF4P15884 667 aa-0.07□□□□□ -2.42
CALD1-218ENST00000478075 GJB2P29033 226 aa-0.07□□□□□ -2.42
CALD1-218ENST00000478075 RDXP35241 583 aaKnown RBP-0.07□□□□□ -2.42
CALD1-218ENST00000478075 OR3A1P47881 315 aa-0.07□□□□□ -2.42
CALD1-218ENST00000478075 RAB28P51157 221 aa-0.07□□□□□ -2.42
CALD1-218ENST00000478075 MTTPP55157 894 aa-0.07□□□□□ -2.42
CALD1-218ENST00000478075 CHAF1BQ13112 559 aa-0.07□□□□□ -2.42
CALD1-218ENST00000478075 ALCAMQ13740 583 aa-0.07□□□□□ -2.42
CALD1-218ENST00000478075 NSDHLQ15738 373 aa-0.07□□□□□ -2.42
CALD1-218ENST00000478075 UGCGQ16739 394 aa-0.07□□□□□ -2.42
CALD1-218ENST00000478075 HAGHQ16775 308 aa-0.07□□□□□ -2.42
CALD1-218ENST00000478075 PIGGQ5H8A4 983 aa-0.07□□□□□ -2.42
CALD1-218ENST00000478075 RABGAP1LQ5R372 815 aa-0.07□□□□□ -2.42
CALD1-218ENST00000478075 SNRNP48Q6IEG0 339 aaKnown RBP-0.07□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms