RNA–Protein interactions for RNA: ENST00000477485.1

RTFDC1-206, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-206ENST00000477485 RNF11Q9Y3C5 154 aa6.04□□□□□ -1.44
RTFDC1-206ENST00000477485 ZNF780BQ9Y6R6 833 aa6.04□□□□□ -1.44
RTFDC1-206ENST00000477485 MXRA5Q9NR99 2828 aa6.03□□□□□ -1.44
RTFDC1-206ENST00000477485 USF3Q68DE3 2245 aa6.03□□□□□ -1.44
RTFDC1-206ENST00000477485 SONP18583 2426 aaKnown RBP6.03□□□□□ -1.44
RTFDC1-206ENST00000477485 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.03□□□□□ -1.44
RTFDC1-206ENST00000477485 C17orf51A8MQB3 221 aa6.03□□□□□ -1.44
RTFDC1-206ENST00000477485 H0YIV9 168 aa6.03□□□□□ -1.44
RTFDC1-206ENST00000477485 ACOX3O15254 700 aa6.03□□□□□ -1.44
RTFDC1-206ENST00000477485 GUCY1B2O75343 617 aa6.03□□□□□ -1.44
RTFDC1-206ENST00000477485 NME6O75414 186 aaPredicted RBP6.03□□□□□ -1.44
RTFDC1-206ENST00000477485 WISP3O95389 354 aaPredicted RBP6.03□□□□□ -1.44
RTFDC1-206ENST00000477485 CLDN9O95484 217 aa6.03□□□□□ -1.44
RTFDC1-206ENST00000477485 PEPDP12955 493 aa6.03□□□□□ -1.44
RTFDC1-206ENST00000477485 NAGAP17050 411 aa6.03□□□□□ -1.44
RTFDC1-206ENST00000477485 HK1P19367 917 aa6.03□□□□□ -1.44
RTFDC1-206ENST00000477485 CSNK2A2P19784 350 aaPredicted RBP6.03□□□□□ -1.44
RTFDC1-206ENST00000477485 TBXA2RP21731 343 aa6.03□□□□□ -1.44
RTFDC1-206ENST00000477485 GRK2P25098 689 aa6.03□□□□□ -1.44
RTFDC1-206ENST00000477485 CCKARP32238 428 aa6.03□□□□□ -1.44
RTFDC1-206ENST00000477485 PTGDSP41222 190 aa6.03□□□□□ -1.44
RTFDC1-206ENST00000477485 RFX3P48380 749 aa6.03□□□□□ -1.44
RTFDC1-206ENST00000477485 CCNG1P51959 295 aa6.03□□□□□ -1.44
RTFDC1-206ENST00000477485 ARFIP1P53367 373 aa6.03□□□□□ -1.44
RTFDC1-206ENST00000477485 CORO7P57737 925 aa6.03□□□□□ -1.44
RTFDC1-206ENST00000477485 EEFSECP57772 596 aaKnown RBP6.03□□□□□ -1.44
RTFDC1-206ENST00000477485 GPX6P59796 221 aa6.03□□□□□ -1.44
RTFDC1-206ENST00000477485 MRPS25P82663 173 aaKnown RBP6.03□□□□□ -1.44
RTFDC1-206ENST00000477485 IRF9Q00978 393 aa6.03□□□□□ -1.44
RTFDC1-206ENST00000477485 HMGCS1Q01581 520 aa6.03□□□□□ -1.44
RTFDC1-206ENST00000477485 IFT88Q13099 833 aa6.03□□□□□ -1.44
RTFDC1-206ENST00000477485 CALCOCO2Q13137 446 aa6.03□□□□□ -1.44
RTFDC1-206ENST00000477485 PON3Q15166 354 aa6.03□□□□□ -1.44
RTFDC1-206ENST00000477485 ZKSCAN8Q15776 578 aaPredicted RBP6.03□□□□□ -1.44
RTFDC1-206ENST00000477485 UAP1Q16222 522 aaPredicted RBP6.03□□□□□ -1.44
RTFDC1-206ENST00000477485 CLEC12BQ2HXU8 276 aa6.03□□□□□ -1.44
RTFDC1-206ENST00000477485 ERCC6LQ2NKX8 1250 aa6.03□□□□□ -1.44
RTFDC1-206ENST00000477485 PRICKLE4Q2TBC4 344 aa6.03□□□□□ -1.44
RTFDC1-206ENST00000477485 BEX5Q5H9J7 111 aa6.03□□□□□ -1.44
RTFDC1-206ENST00000477485 PODNL1Q6PEZ8 512 aa6.03□□□□□ -1.44
RTFDC1-206ENST00000477485 ZNF704Q6ZNC4 412 aaPredicted RBP6.03□□□□□ -1.44
RTFDC1-206ENST00000477485 LARP4Q71RC2 724 aaKnown RBP eCLIP6.03□□□□□ -1.441e-8■■□□□ 12.8
RTFDC1-206ENST00000477485 GOLGA7Q7Z5G4 137 aa6.03□□□□□ -1.44
RTFDC1-206ENST00000477485 ADGRE4PQ86SQ3 457 aa6.03□□□□□ -1.44
RTFDC1-206ENST00000477485 ISCA2Q86U28 154 aa6.03□□□□□ -1.44
RTFDC1-206ENST00000477485 CCDC25Q86WR0 208 aa6.03□□□□□ -1.44
RTFDC1-206ENST00000477485 PHC2Q8IXK0 858 aa6.03□□□□□ -1.44
RTFDC1-206ENST00000477485 CEP112Q8N8E3 955 aa6.03□□□□□ -1.44
RTFDC1-206ENST00000477485 ZNF610Q8N9Z0 462 aa6.03□□□□□ -1.44
RTFDC1-206ENST00000477485 C17orf47Q8NEP4 570 aa6.03□□□□□ -1.44
RTFDC1-206ENST00000477485 KCTD4Q8WVF5 259 aa6.03□□□□□ -1.44
RTFDC1-206ENST00000477485 EFHD2Q96C19 240 aaPredicted RBP6.03□□□□□ -1.44
RTFDC1-206ENST00000477485 PLPPR2Q96GM1 343 aa6.03□□□□□ -1.44
RTFDC1-206ENST00000477485 UBXN10Q96LJ8 280 aa6.03□□□□□ -1.44
RTFDC1-206ENST00000477485 ATOH8Q96SQ7 321 aa6.03□□□□□ -1.44
RTFDC1-206ENST00000477485 DSN1Q9H410 356 aa6.03□□□□□ -1.44
RTFDC1-206ENST00000477485 ELOVL6Q9H5J4 265 aa6.03□□□□□ -1.44
RTFDC1-206ENST00000477485 NOL11Q9H8H0 719 aaKnown RBP6.03□□□□□ -1.44
RTFDC1-206ENST00000477485 ANKRA2Q9H9E1 313 aa6.03□□□□□ -1.44
RTFDC1-206ENST00000477485 AHSPQ9NZD4 102 aa6.03□□□□□ -1.44
RTFDC1-206ENST00000477485 MAT2BQ9NZL9 334 aa6.03□□□□□ -1.44
RTFDC1-206ENST00000477485 PRODH2Q9UF12 536 aa6.03□□□□□ -1.44
RTFDC1-206ENST00000477485 SLC12A4Q9UP95 1085 aa6.03□□□□□ -1.44
RTFDC1-206ENST00000477485 LAMP3Q9UQV4 416 aa6.03□□□□□ -1.44
RTFDC1-206ENST00000477485 ACOT9Q9Y305 439 aa6.03□□□□□ -1.44
RTFDC1-206ENST00000477485 OR10H1Q9Y4A9 318 aa6.03□□□□□ -1.44
RTFDC1-206ENST00000477485 ATRQ13535 2644 aa6.03□□□□□ -1.44
RTFDC1-206ENST00000477485 ROS1P08922 2347 aa6.03□□□□□ -1.44
RTFDC1-206ENST00000477485 A0A087X1B8 175 aa6.02□□□□□ -1.45
RTFDC1-206ENST00000477485 TCRBV9S1A1TA0A576 114 aa6.02□□□□□ -1.45
RTFDC1-206ENST00000477485 C1orf226A1L170 272 aa6.02□□□□□ -1.45
RTFDC1-206ENST00000477485 FRG2CA6NGY1 282 aa6.02□□□□□ -1.45
RTFDC1-206ENST00000477485 OR6C70A6NIJ9 312 aa6.02□□□□□ -1.45
RTFDC1-206ENST00000477485 E7ESA3 106 aa6.02□□□□□ -1.45
RTFDC1-206ENST00000477485 H0YC42 278 aa6.02□□□□□ -1.45
RTFDC1-206ENST00000477485 CLOCKO15516 846 aa6.02□□□□□ -1.45
RTFDC1-206ENST00000477485 HCRTR2O43614 444 aa6.02□□□□□ -1.45
RTFDC1-206ENST00000477485 UGDHO60701 494 aa6.02□□□□□ -1.45
RTFDC1-206ENST00000477485 SIX3O95343 332 aaPredicted RBP6.02□□□□□ -1.45
RTFDC1-206ENST00000477485 CBX7O95931 251 aa6.02□□□□□ -1.45
RTFDC1-206ENST00000477485 PLAUP00749 431 aa6.02□□□□□ -1.45
RTFDC1-206ENST00000477485 ALDOAP04075 364 aaKnown RBP6.02□□□□□ -1.45
RTFDC1-206ENST00000477485 CRHP06850 196 aa6.02□□□□□ -1.45
RTFDC1-206ENST00000477485 C8BP07358 591 aa6.02□□□□□ -1.45
RTFDC1-206ENST00000477485 PCSK2P16519 638 aa6.02□□□□□ -1.45
RTFDC1-206ENST00000477485 TCP1P17987 556 aaKnown RBP6.02□□□□□ -1.45
RTFDC1-206ENST00000477485 CRABP2P29373 138 aa6.02□□□□□ -1.45
RTFDC1-206ENST00000477485 CDKN1AP38936 164 aa6.02□□□□□ -1.45
RTFDC1-206ENST00000477485 KIR2DL2P43627 348 aaPredicted RBP6.02□□□□□ -1.45
RTFDC1-206ENST00000477485 PPICP45877 212 aa6.02□□□□□ -1.45
RTFDC1-206ENST00000477485 ALDH18A1P54886 795 aaKnown RBP6.02□□□□□ -1.45
RTFDC1-206ENST00000477485 TPD52P55327 224 aaPredicted RBP6.02□□□□□ -1.45
RTFDC1-206ENST00000477485 CTBP2P56545 445 aa6.02□□□□□ -1.45
RTFDC1-206ENST00000477485 DSCR4P56555 118 aaPredicted RBP6.02□□□□□ -1.45
RTFDC1-206ENST00000477485 RPS3AP61247 264 aaKnown RBP6.02□□□□□ -1.45
RTFDC1-206ENST00000477485 RPS4XP62701 263 aaKnown RBP6.02□□□□□ -1.45
RTFDC1-206ENST00000477485 OCRLQ01968 901 aa6.02□□□□□ -1.45
RTFDC1-206ENST00000477485 ZNF155Q12901 538 aaPredicted RBP6.02□□□□□ -1.45
RTFDC1-206ENST00000477485 EFR3AQ14156 821 aa6.02□□□□□ -1.45
RTFDC1-206ENST00000477485 E2F2Q14209 437 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms