RNA–Protein interactions for RNA: ENST00000477421.2

COL27A1-204, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 3,991 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-204ENST00000477421 ERMAPQ96PL5 475 aaPredicted RBP10.4□□□□□ -0.74
COL27A1-204ENST00000477421 MS4A8Q9BY19 250 aa10.4□□□□□ -0.74
COL27A1-204ENST00000477421 GLIPR2Q9H4G4 154 aa10.4□□□□□ -0.74
COL27A1-204ENST00000477421 KLHL31Q9H511 634 aa10.4□□□□□ -0.74
COL27A1-204ENST00000477421 TAS2R7Q9NYW3 318 aa10.4□□□□□ -0.74
COL27A1-204ENST00000477421 KLHL33A6NCF5 533 aa10.4□□□□□ -0.74
COL27A1-204ENST00000477421 FAM171A2A8MVW0 826 aa10.4□□□□□ -0.74
COL27A1-204ENST00000477421 PSMD9O00233 223 aa10.4□□□□□ -0.74
COL27A1-204ENST00000477421 LCMT2O60294 686 aaKnown RBP10.4□□□□□ -0.74
COL27A1-204ENST00000477421 RLN1P04808 185 aa10.4□□□□□ -0.74
COL27A1-204ENST00000477421 ADORA3P0DMS8 318 aa10.4□□□□□ -0.74
COL27A1-204ENST00000477421 PORP16435 677 aaPredicted RBP10.4□□□□□ -0.74
COL27A1-204ENST00000477421 MAOBP27338 520 aa10.4□□□□□ -0.74
COL27A1-204ENST00000477421 SOX2P48431 317 aa10.4□□□□□ -0.74
COL27A1-204ENST00000477421 POU6F2P78424 691 aaPredicted RBP10.4□□□□□ -0.74
COL27A1-204ENST00000477421 ABATP80404 500 aa10.4□□□□□ -0.74
COL27A1-204ENST00000477421 FAM71E1Q6IPT2 247 aa10.4□□□□□ -0.74
COL27A1-204ENST00000477421 TECPR1Q7Z6L1 1165 aa10.4□□□□□ -0.74
COL27A1-204ENST00000477421 ZNF248Q8NDW4 579 aa10.4□□□□□ -0.74
COL27A1-204ENST00000477421 ANKK1Q8NFD2 765 aa10.4□□□□□ -0.74
COL27A1-204ENST00000477421 OR6T1Q8NGN1 323 aa10.4□□□□□ -0.74
COL27A1-204ENST00000477421 FANK1Q8TC84 345 aa10.4□□□□□ -0.74
COL27A1-204ENST00000477421 ASB16Q96NS5 453 aa10.4□□□□□ -0.74
COL27A1-204ENST00000477421 NELL2Q99435 816 aa10.4□□□□□ -0.74
COL27A1-204ENST00000477421 FGF22Q9HCT0 170 aa10.4□□□□□ -0.74
COL27A1-204ENST00000477421 Q9N2J8 555 aa10.4□□□□□ -0.74
COL27A1-204ENST00000477421 ZSCAN32Q9NX65 697 aa10.4□□□□□ -0.74
COL27A1-204ENST00000477421 GDE1Q9NZC3 331 aa10.4□□□□□ -0.74
COL27A1-204ENST00000477421 MARK1Q9P0L2 795 aa10.4□□□□□ -0.74
COL27A1-204ENST00000477421 TMPRSS11EQ9UL52 423 aa10.4□□□□□ -0.74
COL27A1-204ENST00000477421 SLC7A7Q9UM01 511 aa10.4□□□□□ -0.74
COL27A1-204ENST00000477421 LIPT1Q9Y234 373 aa10.4□□□□□ -0.74
COL27A1-204ENST00000477421 C17orf113A0A1B0GUU1 675 aa10.4□□□□□ -0.75
COL27A1-204ENST00000477421 BMP4P12644 408 aa10.4□□□□□ -0.75
COL27A1-204ENST00000477421 ZNF3P17036 446 aa10.4□□□□□ -0.75
COL27A1-204ENST00000477421 ACSL1P33121 698 aa10.4□□□□□ -0.75
COL27A1-204ENST00000477421 RAB14P61106 215 aa10.4□□□□□ -0.75
COL27A1-204ENST00000477421 ZNF91Q05481 1191 aa10.4□□□□□ -0.75
COL27A1-204ENST00000477421 TUBA3EQ6PEY2 450 aa10.4□□□□□ -0.75
COL27A1-204ENST00000477421 LILRA6Q6PI73 481 aa10.4□□□□□ -0.75
COL27A1-204ENST00000477421 PLEKHG7Q6ZR37 379 aa10.4□□□□□ -0.75
COL27A1-204ENST00000477421 RPLP0P6Q8NHW5 317 aa10.4□□□□□ -0.75
COL27A1-204ENST00000477421 GNPDA2Q8TDQ7 276 aa10.4□□□□□ -0.75
COL27A1-204ENST00000477421 PATE1Q8WXA2 126 aa10.4□□□□□ -0.75
COL27A1-204ENST00000477421 HRASLS5Q96KN8 279 aa10.4□□□□□ -0.75
COL27A1-204ENST00000477421 PTCHD1Q96NR3 888 aa10.4□□□□□ -0.75
COL27A1-204ENST00000477421 TGM7Q96PF1 710 aa10.4□□□□□ -0.75
COL27A1-204ENST00000477421 PELI2Q9HAT8 420 aa10.4□□□□□ -0.75
COL27A1-204ENST00000477421 SMURF1Q9HCE7 757 aa10.4□□□□□ -0.75
COL27A1-204ENST00000477421 CLEC2DQ9UHP7 191 aa10.4□□□□□ -0.75
COL27A1-204ENST00000477421 PCDHGA6Q9Y5G7 932 aa10.4□□□□□ -0.75
COL27A1-204ENST00000477421 DNAH12Q6ZR08 3092 aa10.4□□□□□ -0.75
COL27A1-204ENST00000477421 SGK494L7N484 410 aa10.39□□□□□ -0.75
COL27A1-204ENST00000477421 NOS1APO75052 506 aaPredicted RBP10.39□□□□□ -0.75
COL27A1-204ENST00000477421 RDH16O75452 317 aa10.39□□□□□ -0.75
COL27A1-204ENST00000477421 CLEC3AO75596 197 aa10.39□□□□□ -0.75
COL27A1-204ENST00000477421 JUNDP17535 347 aa10.39□□□□□ -0.75
COL27A1-204ENST00000477421 SLC35A2P78381 396 aa10.39□□□□□ -0.75
COL27A1-204ENST00000477421 FAM111BQ6SJ93 734 aa10.39□□□□□ -0.75
COL27A1-204ENST00000477421 Q6ZSR6 202 aa10.39□□□□□ -0.75
COL27A1-204ENST00000477421 OR4F15Q8NGB8 312 aa10.39□□□□□ -0.75
COL27A1-204ENST00000477421 ARPC5LQ9BPX5 153 aa10.39□□□□□ -0.75
COL27A1-204ENST00000477421 NDC1Q9BTX1 674 aa10.39□□□□□ -0.75
COL27A1-204ENST00000477421 GPN2Q9H9Y4 310 aaPredicted RBP10.39□□□□□ -0.75
COL27A1-204ENST00000477421 SIRT5Q9NXA8 310 aa10.39□□□□□ -0.75
COL27A1-204ENST00000477421 SPHK1Q9NYA1 384 aa10.39□□□□□ -0.75
COL27A1-204ENST00000477421 STOML2Q9UJZ1 356 aa10.39□□□□□ -0.75
COL27A1-204ENST00000477421 GNG8Q9UK08 70 aa10.39□□□□□ -0.75
COL27A1-204ENST00000477421 A0A1W2PQL4 384 aaPredicted RBP10.39□□□□□ -0.75
COL27A1-204ENST00000477421 CPED1A4D0V7 1026 aa10.39□□□□□ -0.75
COL27A1-204ENST00000477421 C2orf74A8MZ97 194 aa10.39□□□□□ -0.75
COL27A1-204ENST00000477421 TMEM150CB9EJG8 249 aa10.39□□□□□ -0.75
COL27A1-204ENST00000477421 NDUFV2P19404 249 aa10.39□□□□□ -0.75
COL27A1-204ENST00000477421 CSNK1G2P78368 415 aa10.39□□□□□ -0.75
COL27A1-204ENST00000477421 KCNJ10P78508 379 aa10.39□□□□□ -0.75
COL27A1-204ENST00000477421 HHEXQ03014 270 aa10.39□□□□□ -0.75
COL27A1-204ENST00000477421 DSG2Q14126 1118 aa10.39□□□□□ -0.75
COL27A1-204ENST00000477421 PARM1Q6UWI2 310 aa10.39□□□□□ -0.75
COL27A1-204ENST00000477421 SAMD12Q8N8I0 201 aa10.39□□□□□ -0.75
COL27A1-204ENST00000477421 OR4K13Q8NH42 304 aa10.39□□□□□ -0.75
COL27A1-204ENST00000477421 SLC7A13Q8TCU3 470 aa10.39□□□□□ -0.75
COL27A1-204ENST00000477421 METTL2AQ96IZ6 378 aaKnown RBP10.39□□□□□ -0.75
COL27A1-204ENST00000477421 MKRN2Q9H000 416 aaKnown RBP10.39□□□□□ -0.75
COL27A1-204ENST00000477421 ZC4H2Q9NQZ6 224 aa10.39□□□□□ -0.75
COL27A1-204ENST00000477421 ING3Q9NXR8 418 aa10.39□□□□□ -0.75
COL27A1-204ENST00000477421 SAGE1Q9NXZ1 904 aa10.39□□□□□ -0.75
COL27A1-204ENST00000477421 A0A0A6YYC8 382 aaPredicted RBP10.39□□□□□ -0.75
COL27A1-204ENST00000477421 OR6C70A6NIJ9 312 aa10.39□□□□□ -0.75
COL27A1-204ENST00000477421 I3L1I5 382 aaPredicted RBP10.39□□□□□ -0.75
COL27A1-204ENST00000477421 AREL1O15033 823 aa10.39□□□□□ -0.75
COL27A1-204ENST00000477421 OLFM2O95897 454 aa10.39□□□□□ -0.75
COL27A1-204ENST00000477421 AGR2O95994 175 aa10.39□□□□□ -0.75
COL27A1-204ENST00000477421 DHFRP00374 187 aa10.39□□□□□ -0.75
COL27A1-204ENST00000477421 CSTAP01040 98 aa10.39□□□□□ -0.75
COL27A1-204ENST00000477421 NAT2P11245 290 aa10.39□□□□□ -0.75
COL27A1-204ENST00000477421 IDUAP35475 653 aa10.39□□□□□ -0.75
COL27A1-204ENST00000477421 CXCR4P61073 352 aa10.39□□□□□ -0.75
COL27A1-204ENST00000477421 ZNF45Q02386 682 aa10.39□□□□□ -0.75
COL27A1-204ENST00000477421 PON3Q15166 354 aa10.39□□□□□ -0.75
COL27A1-204ENST00000477421 RPE65Q16518 533 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms