RNA–Protein interactions for RNA: ENST00000477334.1

RBM39-231, Transcript of RNA binding motif protein 39, human

TSL 2

Gene RBM39, Length 949 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM39-231	ENST00000477334	GHR	P10912	638 aa		3.17	□□□□□ -1.9
RBM39-231	ENST00000477334	PGAM2	P15259	253 aa		3.17	□□□□□ -1.9
RBM39-231	ENST00000477334	KLK2	P20151	261 aa		3.17	□□□□□ -1.9
RBM39-231	ENST00000477334	FAS	P25445	335 aa		3.17	□□□□□ -1.9
RBM39-231	ENST00000477334	HPD	P32754	393 aa	Predicted RBP	3.17	□□□□□ -1.9
RBM39-231	ENST00000477334	SLC6A8	P48029	635 aa		3.17	□□□□□ -1.9
RBM39-231	ENST00000477334	FNTA	P49354	379 aa		3.17	□□□□□ -1.9
RBM39-231	ENST00000477334	ARHGDIB	P52566	201 aa		3.17	□□□□□ -1.9
RBM39-231	ENST00000477334	PPIA	P62937	165 aa	Known RBP	3.17	□□□□□ -1.9
RBM39-231	ENST00000477334	ZIC1	Q15915	447 aa		3.17	□□□□□ -1.9
RBM39-231	ENST00000477334	RNF212	Q495C1	297 aa		3.17	□□□□□ -1.9
RBM39-231	ENST00000477334	PARP10	Q53GL7	1025 aa		3.17	□□□□□ -1.9
RBM39-231	ENST00000477334	IL23R	Q5VWK5	629 aa		3.17	□□□□□ -1.9
RBM39-231	ENST00000477334	CGB2	Q6NT52	195 aa		3.17	□□□□□ -1.9
RBM39-231	ENST00000477334	FAM159A	Q6UWV7	190 aa		3.17	□□□□□ -1.9
RBM39-231	ENST00000477334	GCNT7	Q6ZNI0	430 aa		3.17	□□□□□ -1.9
RBM39-231	ENST00000477334	TMEM26	Q6ZUK4	368 aa		3.17	□□□□□ -1.9
RBM39-231	ENST00000477334	GOLGA7	Q7Z5G4	137 aa		3.17	□□□□□ -1.9
RBM39-231	ENST00000477334	DNAJA3	Q96EY1	480 aa		3.17	□□□□□ -1.9
RBM39-231	ENST00000477334	C9orf85	Q96MD7	179 aa		3.17	□□□□□ -1.9
RBM39-231	ENST00000477334	TMEM237	Q96Q45	408 aa		3.17	□□□□□ -1.9
RBM39-231	ENST00000477334	CCT8L2	Q96SF2	557 aa		3.17	□□□□□ -1.9
RBM39-231	ENST00000477334	TSPAN18	Q96SJ8	248 aa		3.17	□□□□□ -1.9
RBM39-231	ENST00000477334	TNFRSF19	Q9NS68	423 aa		3.17	□□□□□ -1.9
RBM39-231	ENST00000477334	SENP1	Q9P0U3	644 aa		3.17	□□□□□ -1.9
RBM39-231	ENST00000477334	EPS15L1	Q9UBC2	864 aa		3.17	□□□□□ -1.9
RBM39-231	ENST00000477334	PURG	Q9UJV8	347 aa	Known RBP	3.17	□□□□□ -1.9
RBM39-231	ENST00000477334	FZR1	Q9UM11	496 aa		3.17	□□□□□ -1.9
RBM39-231	ENST00000477334	PLA2G4C	Q9UP65	541 aa		3.17	□□□□□ -1.9
RBM39-231	ENST00000477334	CROCC	Q5TZA2	2017 aa		3.17	□□□□□ -1.9
RBM39-231	ENST00000477334	ADAMTS9	Q9P2N4	1935 aa		3.17	□□□□□ -1.9
RBM39-231	ENST00000477334	FAM168B	A1KXE4	195 aa		3.16	□□□□□ -1.9
RBM39-231	ENST00000477334	PDLIM1	O00151	329 aa		3.16	□□□□□ -1.9
RBM39-231	ENST00000477334	STAM2	O75886	525 aa		3.16	□□□□□ -1.9
RBM39-231	ENST00000477334	GJB5	O95377	273 aa		3.16	□□□□□ -1.9
RBM39-231	ENST00000477334	HOXB7	P09629	217 aa		3.16	□□□□□ -1.9
RBM39-231	ENST00000477334	LAMP1	P11279	417 aa		3.16	□□□□□ -1.9
RBM39-231	ENST00000477334	PRDX2	P32119	198 aa		3.16	□□□□□ -1.9
RBM39-231	ENST00000477334	CHRNA3	P32297	505 aa		3.16	□□□□□ -1.9
RBM39-231	ENST00000477334	NUMB	P49757	651 aa		3.16	□□□□□ -1.9
RBM39-231	ENST00000477334	SLC25A1	P53007	311 aa		3.16	□□□□□ -1.9
RBM39-231	ENST00000477334	CXCL6	P80162	114 aa		3.16	□□□□□ -1.9
RBM39-231	ENST00000477334	IL1RL1	Q01638	556 aa		3.16	□□□□□ -1.9
RBM39-231	ENST00000477334	SRY	Q05066	204 aa		3.16	□□□□□ -1.9
RBM39-231	ENST00000477334	EIF2B1	Q14232	305 aa	Known RBP	3.16	□□□□□ -1.9
RBM39-231	ENST00000477334	PARP6	Q2NL67	630 aa		3.16	□□□□□ -1.9
RBM39-231	ENST00000477334	PAMR1	Q6UXH9	720 aa		3.16	□□□□□ -1.9
RBM39-231	ENST00000477334	UNC5CL	Q8IV45	518 aa		3.16	□□□□□ -1.9
RBM39-231	ENST00000477334	ZNF619	Q8N2I2	560 aa		3.16	□□□□□ -1.9
RBM39-231	ENST00000477334	ARL6IP6	Q8N6S5	226 aa		3.16	□□□□□ -1.9
RBM39-231	ENST00000477334	WDR36	Q8NI36	951 aa	Known RBP	3.16	□□□□□ -1.9
RBM39-231	ENST00000477334	FNDC8	Q8TC99	324 aa		3.16	□□□□□ -1.9
RBM39-231	ENST00000477334	TMEM186	Q96B77	213 aa		3.16	□□□□□ -1.9
RBM39-231	ENST00000477334	SPX	Q9BT56	116 aa		3.16	□□□□□ -1.9
RBM39-231	ENST00000477334	FAM114A2	Q9NRY5	505 aa		3.16	□□□□□ -1.9
RBM39-231	ENST00000477334	CNOT2	Q9NZN8	540 aa	Known RBP	3.16	□□□□□ -1.9
RBM39-231	ENST00000477334	SPAST	Q9UBP0	616 aa		3.16	□□□□□ -1.9
RBM39-231	ENST00000477334	IL20RA	Q9UHF4	553 aa		3.16	□□□□□ -1.9
RBM39-231	ENST00000477334	BCAP29	Q9UHQ4	241 aa		3.16	□□□□□ -1.9
RBM39-231	ENST00000477334	NTNG1	Q9Y2I2	539 aa		3.16	□□□□□ -1.9
RBM39-231	ENST00000477334	MTF2	Q9Y483	593 aa	Predicted RBP	3.16	□□□□□ -1.9
RBM39-231	ENST00000477334	CFAP65	Q6ZU64	1925 aa	Known RBP	3.16	□□□□□ -1.9
RBM39-231	ENST00000477334	ZNF646	O15015	1829 aa	Predicted RBP	3.15	□□□□□ -1.91
RBM39-231	ENST00000477334		A8MX80	341 aa		3.15	□□□□□ -1.91
RBM39-231	ENST00000477334	NPIPA2	E9PIF3	369 aa		3.15	□□□□□ -1.91
RBM39-231	ENST00000477334		G3V3Y1	287 aa		3.15	□□□□□ -1.91
RBM39-231	ENST00000477334	SEC22B	O75396	215 aa		3.15	□□□□□ -1.91
RBM39-231	ENST00000477334	MT-ATP6	P00846	226 aa		3.15	□□□□□ -1.91
RBM39-231	ENST00000477334	GIG44	P09565	113 aa	Predicted RBP	3.15	□□□□□ -1.91
RBM39-231	ENST00000477334	ETS1	P14921	441 aa		3.15	□□□□□ -1.91
RBM39-231	ENST00000477334	GDF1	P27539	372 aa		3.15	□□□□□ -1.91
RBM39-231	ENST00000477334	MDH2	P40926	338 aa	Known RBP	3.15	□□□□□ -1.91
RBM39-231	ENST00000477334	ZSWIM7	Q19AV6	140 aa		3.15	□□□□□ -1.91
RBM39-231	ENST00000477334	GSG1	Q2KHT4	349 aa		3.15	□□□□□ -1.91
RBM39-231	ENST00000477334	LRIT3	Q3SXY7	679 aa		3.15	□□□□□ -1.91
RBM39-231	ENST00000477334	ACSF3	Q4G176	576 aa	Predicted RBP	3.15	□□□□□ -1.91
RBM39-231	ENST00000477334	BEND6	Q5SZJ8	279 aa	Predicted RBP	3.15	□□□□□ -1.91
RBM39-231	ENST00000477334	PNCK	Q6P2M8	343 aa		3.15	□□□□□ -1.91
RBM39-231	ENST00000477334	NEK5	Q6P3R8	708 aa		3.15	□□□□□ -1.91
RBM39-231	ENST00000477334	P4HA3	Q7Z4N8	544 aa		3.15	□□□□□ -1.91
RBM39-231	ENST00000477334	C11orf53	Q8IXP5	236 aa		3.15	□□□□□ -1.91
RBM39-231	ENST00000477334		Q8N9G6	341 aa	Predicted RBP	3.15	□□□□□ -1.91
RBM39-231	ENST00000477334	SIGLEC12	Q96PQ1	595 aa		3.15	□□□□□ -1.91
RBM39-231	ENST00000477334	SLITRK2	Q9H156	845 aa		3.15	□□□□□ -1.91
RBM39-231	ENST00000477334	C1orf21	Q9H246	121 aa		3.15	□□□□□ -1.91
RBM39-231	ENST00000477334	DCAF13	Q9NV06	445 aa	Known RBP	3.15	□□□□□ -1.91
RBM39-231	ENST00000477334	FASTKD2	Q9NYY8	710 aa	Known RBP eCLIP	3.15	□□□□□ -1.91
RBM39-231	ENST00000477334	MBD2	Q9UBB5	411 aa		3.15	□□□□□ -1.91
RBM39-231	ENST00000477334		Q9UF83	564 aa		3.15	□□□□□ -1.91
RBM39-231	ENST00000477334	RNF103-CHMP3	A0A140T963	221 aa		3.14	□□□□□ -1.91
RBM39-231	ENST00000477334	IMPA2	O14732	288 aa		3.14	□□□□□ -1.91
RBM39-231	ENST00000477334	GPAA1	O43292	621 aa		3.14	□□□□□ -1.91
RBM39-231	ENST00000477334	PRPSAP2	O60256	369 aa		3.14	□□□□□ -1.91
RBM39-231	ENST00000477334	LCMT2	O60294	686 aa	Known RBP	3.14	□□□□□ -1.91
RBM39-231	ENST00000477334	TOX	O94900	526 aa		3.14	□□□□□ -1.91
RBM39-231	ENST00000477334	RALA	P11233	206 aa		3.14	□□□□□ -1.91
RBM39-231	ENST00000477334	IL2RG	P31785	369 aa		3.14	□□□□□ -1.91
RBM39-231	ENST00000477334	METAP1	P53582	386 aa		3.14	□□□□□ -1.91
RBM39-231	ENST00000477334	SLC26A5	P58743	744 aa		3.14	□□□□□ -1.91
RBM39-231	ENST00000477334	STARD6	P59095	220 aa		3.14	□□□□□ -1.91

Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms