RNA–Protein interactions for RNA: ENST00000477100.1

TRBVB-201, Transcript of T cell receptor beta variable B (pseudogene), humanhuman

BASIC

Gene TRBVB, Length 408 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBVB-201ENST00000477100 PSMD1Q99460 953 aa0.71□□□□□ -2.3
TRBVB-201ENST00000477100 GPR174Q9BXC1 333 aa0.71□□□□□ -2.3
TRBVB-201ENST00000477100 PLA2G2FQ9BZM2 168 aa0.71□□□□□ -2.3
TRBVB-201ENST00000477100 CCDC68Q9H2F9 335 aa0.71□□□□□ -2.3
TRBVB-201ENST00000477100 ZHX3Q9H4I2 956 aa0.71□□□□□ -2.3
TRBVB-201ENST00000477100 ALG9Q9H6U8 611 aa0.71□□□□□ -2.3
TRBVB-201ENST00000477100 DCLRE1BQ9H816 532 aa0.71□□□□□ -2.3
TRBVB-201ENST00000477100 GPR173Q9NS66 373 aa0.71□□□□□ -2.3
TRBVB-201ENST00000477100 NSMCE4AQ9NXX6 385 aa0.71□□□□□ -2.3
TRBVB-201ENST00000477100 LCMT1Q9UIC8 334 aa0.71□□□□□ -2.3
TRBVB-201ENST00000477100 TBX21Q9UL17 535 aa0.71□□□□□ -2.3
TRBVB-201ENST00000477100 REV3LO60673 3130 aa0.71□□□□□ -2.3
TRBVB-201ENST00000477100 CEP250Q9BV73 2442 aa0.71□□□□□ -2.3
TRBVB-201ENST00000477100 FGD5Q6ZNL6 1462 aa0.71□□□□□ -2.3
TRBVB-201ENST00000477100 MAPKBP1O60336 1514 aa0.7□□□□□ -2.3
TRBVB-201ENST00000477100 EHBP1L1Q8N3D4 1523 aa0.7□□□□□ -2.3
TRBVB-201ENST00000477100 ACACBO00763 2458 aa0.7□□□□□ -2.3
TRBVB-201ENST00000477100 PPRC1Q5VV67 1664 aaKnown RBP0.7□□□□□ -2.3
TRBVB-201ENST00000477100 GAPVD1Q14C86 1478 aa0.7□□□□□ -2.3
TRBVB-201ENST00000477100 RALGAPBQ86X10 1494 aa0.7□□□□□ -2.3
TRBVB-201ENST00000477100 SCAF11Q99590 1463 aaKnown RBP0.7□□□□□ -2.3
TRBVB-201ENST00000477100 MRC2Q9UBG0 1479 aa0.7□□□□□ -2.3
TRBVB-201ENST00000477100 A0A087WV48 116 aa0.7□□□□□ -2.3
TRBVB-201ENST00000477100 A0A096LNJ9 63 aa0.7□□□□□ -2.3
TRBVB-201ENST00000477100 TPD52L2O43399 206 aaKnown RBP0.7□□□□□ -2.3
TRBVB-201ENST00000477100 AIREO43918 545 aa0.7□□□□□ -2.3
TRBVB-201ENST00000477100 SHOX2O60902 331 aaPredicted RBP0.7□□□□□ -2.3
TRBVB-201ENST00000477100 RBBP9O75884 186 aa0.7□□□□□ -2.3
TRBVB-201ENST00000477100 SIX3O95343 332 aaPredicted RBP0.7□□□□□ -2.3
TRBVB-201ENST00000477100 OAS1P00973 400 aaKnown RBP0.7□□□□□ -2.3
TRBVB-201ENST00000477100 PCCAP05165 728 aaPredicted RBP0.7□□□□□ -2.3
TRBVB-201ENST00000477100 DCNP07585 359 aaKnown RBP0.7□□□□□ -2.3
TRBVB-201ENST00000477100 HMGB1P09429 215 aaKnown RBP0.7□□□□□ -2.3
TRBVB-201ENST00000477100 TIA1P31483 386 aaKnown RBP eCLIP0.7□□□□□ -2.3
TRBVB-201ENST00000477100 LHX2P50458 406 aa0.7□□□□□ -2.3
TRBVB-201ENST00000477100 IFI35P80217 286 aaPredicted RBP0.7□□□□□ -2.3
TRBVB-201ENST00000477100 ZNF85Q03923 595 aa0.7□□□□□ -2.3
TRBVB-201ENST00000477100 CDO1Q16878 200 aa0.7□□□□□ -2.3
TRBVB-201ENST00000477100 FRA10AC1Q70Z53 315 aa0.7□□□□□ -2.3
TRBVB-201ENST00000477100 DNAJB7Q7Z6W7 309 aaPredicted RBP0.7□□□□□ -2.3
TRBVB-201ENST00000477100 SLFN11Q7Z7L1 901 aa0.7□□□□□ -2.3
TRBVB-201ENST00000477100 HMGN2P46Q86SG4 172 aa0.7□□□□□ -2.3
TRBVB-201ENST00000477100 PPP1R27Q86WC6 154 aa0.7□□□□□ -2.3
TRBVB-201ENST00000477100 ZNF100Q8IYN0 542 aa0.7□□□□□ -2.3
TRBVB-201ENST00000477100 MCOLN2Q8IZK6 566 aa0.7□□□□□ -2.3
TRBVB-201ENST00000477100 TRPV3Q8NET8 790 aa0.7□□□□□ -2.3
TRBVB-201ENST00000477100 UBTD2Q8WUN7 234 aa0.7□□□□□ -2.3
TRBVB-201ENST00000477100 ZCCHC13Q8WW36 166 aaKnown RBP0.7□□□□□ -2.3
TRBVB-201ENST00000477100 PRCCQ92733 491 aaPredicted RBP0.7□□□□□ -2.3
TRBVB-201ENST00000477100 TAF4BQ92750 862 aa0.7□□□□□ -2.3
TRBVB-201ENST00000477100 NEIL2Q969S2 332 aa0.7□□□□□ -2.3
TRBVB-201ENST00000477100 PGAP3Q96FM1 320 aaPredicted RBP0.7□□□□□ -2.3
TRBVB-201ENST00000477100 SPIN2AQ99865 258 aa0.7□□□□□ -2.3
TRBVB-201ENST00000477100 SPIN2BQ9BPZ2 258 aa0.7□□□□□ -2.3
TRBVB-201ENST00000477100 NUSAP1Q9BXS6 441 aaKnown RBP0.7□□□□□ -2.3
TRBVB-201ENST00000477100 LRRC2Q9BYS8 371 aa0.7□□□□□ -2.3
TRBVB-201ENST00000477100 CLMPQ9H6B4 373 aa0.7□□□□□ -2.3
TRBVB-201ENST00000477100 ESM1Q9NQ30 184 aa0.7□□□□□ -2.3
TRBVB-201ENST00000477100 GDF3Q9NR23 364 aa0.7□□□□□ -2.3
TRBVB-201ENST00000477100 MIS18AQ9NYP9 233 aa0.7□□□□□ -2.3
TRBVB-201ENST00000477100 ZNF225Q9UK10 706 aa0.7□□□□□ -2.3
TRBVB-201ENST00000477100 FLNAP21333 2647 aaKnown RBP0.7□□□□□ -2.3
TRBVB-201ENST00000477100 GVINP1Q7Z2Y8 2422 aa0.7□□□□□ -2.3
TRBVB-201ENST00000477100 CREBBPQ92793 2442 aa0.7□□□□□ -2.3
TRBVB-201ENST00000477100 NEURL4Q96JN8 1562 aa0.7□□□□□ -2.3
TRBVB-201ENST00000477100 JCADQ9P266 1359 aa0.7□□□□□ -2.3
TRBVB-201ENST00000477100 GPATCH8Q9UKJ3 1502 aaKnown RBP0.69□□□□□ -2.3
TRBVB-201ENST00000477100 BRWD3Q6RI45 1802 aa0.69□□□□□ -2.3
TRBVB-201ENST00000477100 ATAD2BQ9ULI0 1458 aa0.69□□□□□ -2.3
TRBVB-201ENST00000477100 BPTFQ12830 3046 aa0.69□□□□□ -2.3
TRBVB-201ENST00000477100 KIF21BO75037 1637 aa0.69□□□□□ -2.3
TRBVB-201ENST00000477100 SH3PXD2BA1X283 911 aa0.69□□□□□ -2.3
TRBVB-201ENST00000477100 MACROD2A1Z1Q3 448 aa0.69□□□□□ -2.3
TRBVB-201ENST00000477100 NKX2-6A6NCS4 301 aa0.69□□□□□ -2.3
TRBVB-201ENST00000477100 URADA6NGE7 173 aa0.69□□□□□ -2.3
TRBVB-201ENST00000477100 FAM86B1E9PN63 330 aa0.69□□□□□ -2.3
TRBVB-201ENST00000477100 NPIPB7O75200 414 aa0.69□□□□□ -2.3
TRBVB-201ENST00000477100 ZNF254O75437 659 aa0.69□□□□□ -2.3
TRBVB-201ENST00000477100 INSP01308 110 aa0.69□□□□□ -2.3
TRBVB-201ENST00000477100 RETP07949 1114 aa0.69□□□□□ -2.3
TRBVB-201ENST00000477100 FAM86B2P0C5J1 330 aa0.69□□□□□ -2.3
TRBVB-201ENST00000477100 GP5P40197 560 aa0.69□□□□□ -2.3
TRBVB-201ENST00000477100 RPS9P46781 194 aaKnown RBP0.69□□□□□ -2.3
TRBVB-201ENST00000477100 VCPP55072 806 aaKnown RBP0.69□□□□□ -2.3
TRBVB-201ENST00000477100 GABPAQ06546 454 aa0.69□□□□□ -2.3
TRBVB-201ENST00000477100 GGTLC2Q14390 218 aa0.69□□□□□ -2.3
TRBVB-201ENST00000477100 ZNF273Q14593 569 aa0.69□□□□□ -2.3
TRBVB-201ENST00000477100 HYAL4Q2M3T9 481 aa0.69□□□□□ -2.3
TRBVB-201ENST00000477100 C5orf47Q569G3 176 aa0.69□□□□□ -2.3
TRBVB-201ENST00000477100 METTL11BQ5VVY1 283 aa0.69□□□□□ -2.3
TRBVB-201ENST00000477100 GPR139Q6DWJ6 353 aa0.69□□□□□ -2.3
TRBVB-201ENST00000477100 CXCL17Q6UXB2 119 aa0.69□□□□□ -2.3
TRBVB-201ENST00000477100 CHST3Q7LGC8 479 aa0.69□□□□□ -2.3
TRBVB-201ENST00000477100 GPR142Q7Z601 462 aa0.69□□□□□ -2.3
TRBVB-201ENST00000477100 PRPF39Q86UA1 669 aaKnown RBP0.69□□□□□ -2.3
TRBVB-201ENST00000477100 SIX6OS1Q8N1H7 587 aa0.69□□□□□ -2.3
TRBVB-201ENST00000477100 FAM71E2Q8N5Q1 922 aa0.69□□□□□ -2.3
TRBVB-201ENST00000477100 ALLCQ8N6M5 410 aa0.69□□□□□ -2.3
TRBVB-201ENST00000477100 OR2L8Q8NGY9 312 aa0.69□□□□□ -2.3
TRBVB-201ENST00000477100 ANKRD49Q8WVL7 239 aa0.69□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms