RNA–Protein interactions for RNA: ENST00000475639.5

U2AF1-209, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 4,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-209ENST00000475639 RPL35P42766 123 aaKnown RBP10.97□□□□□ -0.65
U2AF1-209ENST00000475639 HMGCS1Q01581 520 aa10.97□□□□□ -0.65
U2AF1-209ENST00000475639 KEAP1Q14145 624 aa10.97□□□□□ -0.65
U2AF1-209ENST00000475639 ZBTB37Q5TC79 503 aa10.97□□□□□ -0.65
U2AF1-209ENST00000475639 KANK2Q63ZY3 851 aa10.97□□□□□ -0.65
U2AF1-209ENST00000475639 RDH10Q8IZV5 341 aa10.97□□□□□ -0.65
U2AF1-209ENST00000475639 ARL14Q8N4G2 192 aa10.97□□□□□ -0.65
U2AF1-209ENST00000475639 ZNF583Q96ND8 569 aa10.97□□□□□ -0.65
U2AF1-209ENST00000475639 NSUN5Q96P11 429 aaKnown RBP10.97□□□□□ -0.65
U2AF1-209ENST00000475639 SLC2A6Q9UGQ3 507 aa10.97□□□□□ -0.65
U2AF1-209ENST00000475639 CD84Q9UIB8 345 aa10.97□□□□□ -0.65
U2AF1-209ENST00000475639 CLEC4EQ9ULY5 219 aa10.97□□□□□ -0.65
U2AF1-209ENST00000475639 MRPS14O60783 128 aaKnown RBP10.96□□□□□ -0.65
U2AF1-209ENST00000475639 PSPHP78330 225 aa10.96□□□□□ -0.65
U2AF1-209ENST00000475639 TRAM2Q15035 370 aa10.96□□□□□ -0.65
U2AF1-209ENST00000475639 PRAMEF14Q5SWL7 426 aa10.96□□□□□ -0.65
U2AF1-209ENST00000475639 PRAMEF13Q5VWM6 474 aa10.96□□□□□ -0.65
U2AF1-209ENST00000475639 PLPP4Q5VZY2 271 aa10.96□□□□□ -0.65
U2AF1-209ENST00000475639 AQP11Q8NBQ7 271 aa10.96□□□□□ -0.65
U2AF1-209ENST00000475639 METTL7AQ9H8H3 244 aa10.96□□□□□ -0.65
U2AF1-209ENST00000475639 AIG1Q9NVV5 245 aa10.96□□□□□ -0.65
U2AF1-209ENST00000475639 MGAT4BQ9UQ53 548 aa10.96□□□□□ -0.65
U2AF1-209ENST00000475639 NEUROG3Q9Y4Z2 214 aa10.96□□□□□ -0.65
U2AF1-209ENST00000475639 STMND1H3BQB6 276 aa10.96□□□□□ -0.65
U2AF1-209ENST00000475639 LRRTM2O43300 516 aa10.96□□□□□ -0.65
U2AF1-209ENST00000475639 PIP5K1CO60331 668 aa10.96□□□□□ -0.65
U2AF1-209ENST00000475639 ZNF254O75437 659 aa10.96□□□□□ -0.65
U2AF1-209ENST00000475639 BCHEP06276 602 aa10.96□□□□□ -0.65
U2AF1-209ENST00000475639 HOXC5Q00444 222 aa10.96□□□□□ -0.65
U2AF1-209ENST00000475639 EXOC3L2Q2M3D2 409 aa10.96□□□□□ -0.65
U2AF1-209ENST00000475639 SOWAHAQ2M3V2 549 aa10.96□□□□□ -0.65
U2AF1-209ENST00000475639 FKBP1CQ5VVH2 108 aa10.96□□□□□ -0.65
U2AF1-209ENST00000475639 TMEM225Q6GV28 225 aa10.96□□□□□ -0.65
U2AF1-209ENST00000475639 METTL2BQ6P1Q9 378 aaKnown RBP10.96□□□□□ -0.65
U2AF1-209ENST00000475639 CEACAM20Q6UY09 585 aa10.96□□□□□ -0.65
U2AF1-209ENST00000475639 RCBTB1Q8NDN9 531 aa10.96□□□□□ -0.65
U2AF1-209ENST00000475639 C7orf57Q8NEG2 295 aa10.96□□□□□ -0.65
U2AF1-209ENST00000475639 OR6N2Q8NGY6 317 aa10.96□□□□□ -0.65
U2AF1-209ENST00000475639 OR56A3Q8NH54 315 aa10.96□□□□□ -0.65
U2AF1-209ENST00000475639 NEIL3Q8TAT5 605 aa10.96□□□□□ -0.65
U2AF1-209ENST00000475639 TRAF4Q9BUZ4 470 aaPredicted RBP10.96□□□□□ -0.65
U2AF1-209ENST00000475639 OR51I1Q9H343 314 aa10.96□□□□□ -0.65
U2AF1-209ENST00000475639 GORASP2Q9H8Y8 452 aa10.96□□□□□ -0.65
U2AF1-209ENST00000475639 KLHL21Q9UJP4 597 aa10.96□□□□□ -0.65
U2AF1-209ENST00000475639 MYO10Q9HD67 2058 aa10.96□□□□□ -0.65
U2AF1-209ENST00000475639 HAS3O00219 553 aa10.96□□□□□ -0.66
U2AF1-209ENST00000475639 IL33O95760 270 aa10.96□□□□□ -0.66
U2AF1-209ENST00000475639 AMY2BP19961 511 aa10.96□□□□□ -0.66
U2AF1-209ENST00000475639 VEGFCP49767 419 aa10.96□□□□□ -0.66
U2AF1-209ENST00000475639 HERVK_113P63132 956 aa10.96□□□□□ -0.66
U2AF1-209ENST00000475639 EIF2B1Q14232 305 aaKnown RBP10.96□□□□□ -0.66
U2AF1-209ENST00000475639 GAS6Q14393 721 aa10.96□□□□□ -0.66
U2AF1-209ENST00000475639 TRAM1Q15629 374 aa10.96□□□□□ -0.66
U2AF1-209ENST00000475639 TIGD3Q6B0B8 471 aa10.96□□□□□ -0.66
U2AF1-209ENST00000475639 OR8K3Q8NH51 312 aa10.96□□□□□ -0.66
U2AF1-209ENST00000475639 TMEM234Q8WY98 164 aa10.96□□□□□ -0.66
U2AF1-209ENST00000475639 GLYATL1Q969I3 302 aa10.96□□□□□ -0.66
U2AF1-209ENST00000475639 ARL5BQ96KC2 179 aa10.96□□□□□ -0.66
U2AF1-209ENST00000475639 ERVK-6Q9BXR3 956 aa10.96□□□□□ -0.66
U2AF1-209ENST00000475639 CACNG6Q9BXT2 260 aa10.96□□□□□ -0.66
U2AF1-209ENST00000475639 SCPEP1Q9HB40 452 aa10.96□□□□□ -0.66
U2AF1-209ENST00000475639 C19orf25Q9UFG5 118 aaPredicted RBP10.96□□□□□ -0.66
U2AF1-209ENST00000475639 HSPE1-MOB4S4R3N1 261 aa10.96□□□□□ -0.66
U2AF1-209ENST00000475639 PCNTO95613 3336 aa10.96□□□□□ -0.66
U2AF1-209ENST00000475639 MICAL3Q7RTP6 2002 aa10.96□□□□□ -0.66
U2AF1-209ENST00000475639 MT-CYBP00156 380 aaPredicted RBP10.96□□□□□ -0.66
U2AF1-209ENST00000475639 ETV1P50549 477 aa10.96□□□□□ -0.66
U2AF1-209ENST00000475639 CDK3Q00526 305 aa10.96□□□□□ -0.66
U2AF1-209ENST00000475639 TAF1AQ15573 450 aaPredicted RBP10.96□□□□□ -0.66
U2AF1-209ENST00000475639 C14orf28Q4W4Y0 310 aa10.96□□□□□ -0.66
U2AF1-209ENST00000475639 CLVS2Q5SYC1 327 aa10.96□□□□□ -0.66
U2AF1-209ENST00000475639 KIAA1614Q5VZ46 1190 aa10.96□□□□□ -0.66
U2AF1-209ENST00000475639 C9orf57Q5W0N0 161 aa10.96□□□□□ -0.66
U2AF1-209ENST00000475639 SLC36A4Q6YBV0 504 aa10.96□□□□□ -0.66
U2AF1-209ENST00000475639 VWA5B2Q8N398 1253 aa10.96□□□□□ -0.66
U2AF1-209ENST00000475639 C1orf52Q8N6N3 182 aaKnown RBP10.96□□□□□ -0.66
U2AF1-209ENST00000475639 NUDT8Q8WV74 236 aa10.96□□□□□ -0.66
U2AF1-209ENST00000475639 APH1BQ8WW43 257 aa10.96□□□□□ -0.66
U2AF1-209ENST00000475639 GCM1Q9NP62 436 aa10.96□□□□□ -0.66
U2AF1-209ENST00000475639 TAS2R8Q9NYW2 309 aa10.96□□□□□ -0.66
U2AF1-209ENST00000475639 GHRLQ9UBU3 117 aa10.96□□□□□ -0.66
U2AF1-209ENST00000475639 SHROOM3Q8TF72 1996 aa10.95□□□□□ -0.66
U2AF1-209ENST00000475639 ZNF850A8MQ14 1090 aa10.95□□□□□ -0.66
U2AF1-209ENST00000475639 FMO6PO60774 539 aa10.95□□□□□ -0.66
U2AF1-209ENST00000475639 PTPN6P29350 595 aa10.95□□□□□ -0.66
U2AF1-209ENST00000475639 CYCSP99999 105 aaKnown RBP10.95□□□□□ -0.66
U2AF1-209ENST00000475639 CYP27C1Q4G0S4 372 aa10.95□□□□□ -0.66
U2AF1-209ENST00000475639 OR4F3Q6IEY1 312 aa10.95□□□□□ -0.66
U2AF1-209ENST00000475639 GSG1LQ6UXU4 331 aa10.95□□□□□ -0.66
U2AF1-209ENST00000475639 TRIM46Q7Z4K8 759 aa10.95□□□□□ -0.66
U2AF1-209ENST00000475639 SIDT2Q8NBJ9 832 aaKnown RBP10.95□□□□□ -0.66
U2AF1-209ENST00000475639 C2CD4AQ8NCU7 369 aaPredicted RBP10.95□□□□□ -0.66
U2AF1-209ENST00000475639 ZDHHC12Q96GR4 267 aa10.95□□□□□ -0.66
U2AF1-209ENST00000475639 OR2AG1Q9H205 316 aa10.95□□□□□ -0.66
U2AF1-209ENST00000475639 DNAJC5Q9H3Z4 198 aa10.95□□□□□ -0.66
U2AF1-209ENST00000475639 KCNJ16Q9NPI9 418 aa10.95□□□□□ -0.66
U2AF1-209ENST00000475639 FZD10Q9ULW2 581 aa10.95□□□□□ -0.66
U2AF1-209ENST00000475639 MYLKQ15746 1914 aa10.95□□□□□ -0.66
U2AF1-209ENST00000475639 KIAA1217Q5T5P2 1943 aa10.95□□□□□ -0.66
U2AF1-209ENST00000475639 ASXL3Q9C0F0 2248 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms