RNA–Protein interactions for RNA: ENST00000475591.5

UBXN11-214, Transcript of UBX domain protein 11, humanhuman

TSL 1 (best)

Gene UBXN11, Length 2,542 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-214ENST00000475591 SYT14P1Q58G82 188 aa13.2□□□□□ -0.3
UBXN11-214ENST00000475591 ZNF542PQ5EBM4 170 aa13.2□□□□□ -0.3
UBXN11-214ENST00000475591 C1orf94Q6P1W5 598 aa13.2□□□□□ -0.3
UBXN11-214ENST00000475591 KBTBD8Q8NFY9 601 aa13.2□□□□□ -0.3
UBXN11-214ENST00000475591 RPLP0P6Q8NHW5 317 aa13.2□□□□□ -0.3
UBXN11-214ENST00000475591 TRMT61AQ96FX7 289 aaKnown RBP13.2□□□□□ -0.3
UBXN11-214ENST00000475591 TMEM80Q96HE8 168 aa13.2□□□□□ -0.3
UBXN11-214ENST00000475591 LRR1Q96L50 414 aa13.2□□□□□ -0.3
UBXN11-214ENST00000475591 OR2A5Q96R48 311 aa13.2□□□□□ -0.3
UBXN11-214ENST00000475591 TCEAL2Q9H3H9 227 aaPredicted RBP13.2□□□□□ -0.3
UBXN11-214ENST00000475591 ABCB10Q9NRK6 738 aa13.2□□□□□ -0.3
UBXN11-214ENST00000475591 LYARQ9NX58 379 aaKnown RBP13.2□□□□□ -0.3
UBXN11-214ENST00000475591 KCMF1Q9P0J7 381 aa13.2□□□□□ -0.3
UBXN11-214ENST00000475591 ANKMY1Q9P2S6 941 aa13.2□□□□□ -0.3
UBXN11-214ENST00000475591 CARD8Q9Y2G2 431 aa13.2□□□□□ -0.3
UBXN11-214ENST00000475591 KLK4Q9Y5K2 254 aa13.2□□□□□ -0.3
UBXN11-214ENST00000475591 PIAS3Q9Y6X2 628 aa13.2□□□□□ -0.3
UBXN11-214ENST00000475591 AGAP5A6NIR3 686 aa13.19□□□□□ -0.3
UBXN11-214ENST00000475591 CASC3O15234 703 aaKnown RBP13.19□□□□□ -0.3
UBXN11-214ENST00000475591 EIF2S1P05198 315 aaKnown RBP13.19□□□□□ -0.3
UBXN11-214ENST00000475591 SLC35G6P0C7Q6 338 aa13.19□□□□□ -0.3
UBXN11-214ENST00000475591 CDH3P22223 829 aa13.19□□□□□ -0.3
UBXN11-214ENST00000475591 TGM1P22735 817 aa13.19□□□□□ -0.3
UBXN11-214ENST00000475591 SOX18P35713 384 aa13.19□□□□□ -0.3
UBXN11-214ENST00000475591 TPMTP51580 245 aa13.19□□□□□ -0.3
UBXN11-214ENST00000475591 TNFRSF17Q02223 184 aa13.19□□□□□ -0.3
UBXN11-214ENST00000475591 RELAQ04206 551 aa13.19□□□□□ -0.3
UBXN11-214ENST00000475591 CLEC12AQ5QGZ9 265 aa13.19□□□□□ -0.3
UBXN11-214ENST00000475591 CCNJQ5T5M9 372 aa13.19□□□□□ -0.3
UBXN11-214ENST00000475591 C19orf48Q6RUI8 117 aa13.19□□□□□ -0.3
UBXN11-214ENST00000475591 NKAIN4Q8IVV8 208 aa13.19□□□□□ -0.3
UBXN11-214ENST00000475591 LRRC25Q8N386 305 aaPredicted RBP13.19□□□□□ -0.3
UBXN11-214ENST00000475591 AMER2Q8N7J2 671 aa13.19□□□□□ -0.3
UBXN11-214ENST00000475591 FAM83FQ8NEG4 500 aaPredicted RBP13.19□□□□□ -0.3
UBXN11-214ENST00000475591 MOAP1Q96BY2 351 aa13.19□□□□□ -0.3
UBXN11-214ENST00000475591 FAM46AQ96IP4 442 aaKnown RBP13.19□□□□□ -0.3
UBXN11-214ENST00000475591 NEURL2Q9BR09 285 aa13.19□□□□□ -0.3
UBXN11-214ENST00000475591 ACTRT3Q9BYD9 372 aa13.19□□□□□ -0.3
UBXN11-214ENST00000475591 EXOSC4Q9NPD3 245 aaKnown RBP13.19□□□□□ -0.3
UBXN11-214ENST00000475591 EVA1BQ9NVM1 165 aa13.19□□□□□ -0.3
UBXN11-214ENST00000475591 GIN1Q9NXP7 522 aa13.19□□□□□ -0.3
UBXN11-214ENST00000475591 MSRAQ9UJ68 235 aa13.19□□□□□ -0.3
UBXN11-214ENST00000475591 FAM170BA6NMN3 283 aa13.19□□□□□ -0.3
UBXN11-214ENST00000475591 LRRTM2O43300 516 aa13.19□□□□□ -0.3
UBXN11-214ENST00000475591 TBX1O43435 398 aa13.19□□□□□ -0.3
UBXN11-214ENST00000475591 KDM1AO60341 852 aa13.19□□□□□ -0.3
UBXN11-214ENST00000475591 CYP7B1O75881 506 aa13.19□□□□□ -0.3
UBXN11-214ENST00000475591 THY1P04216 161 aa13.19□□□□□ -0.3
UBXN11-214ENST00000475591 CELA2BP08218 269 aaPredicted RBP13.19□□□□□ -0.3
UBXN11-214ENST00000475591 TSFMP43897 325 aaKnown RBP13.19□□□□□ -0.3
UBXN11-214ENST00000475591 LSSP48449 732 aa13.19□□□□□ -0.3
UBXN11-214ENST00000475591 PPP5CP53041 499 aa13.19□□□□□ -0.3
UBXN11-214ENST00000475591 RAB15P59190 212 aa13.19□□□□□ -0.3
UBXN11-214ENST00000475591 SRP54P61011 504 aaKnown RBP13.19□□□□□ -0.3
UBXN11-214ENST00000475591 CDK5Q00535 292 aa13.19□□□□□ -0.3
UBXN11-214ENST00000475591 GNA13Q14344 377 aa13.19□□□□□ -0.3
UBXN11-214ENST00000475591 MFSD12Q6NUT3 480 aa13.19□□□□□ -0.3
UBXN11-214ENST00000475591 ZNF761Q86XN6 746 aaPredicted RBP13.19□□□□□ -0.3
UBXN11-214ENST00000475591 FLCNQ8NFG4 579 aa13.19□□□□□ -0.3
UBXN11-214ENST00000475591 ADAMTS15Q8TE58 950 aa13.19□□□□□ -0.3
UBXN11-214ENST00000475591 DIO2Q92813 273 aa13.19□□□□□ -0.3
UBXN11-214ENST00000475591 ARSGQ96EG1 525 aa13.19□□□□□ -0.3
UBXN11-214ENST00000475591 ZNF582Q96NG8 517 aaPredicted RBP13.19□□□□□ -0.3
UBXN11-214ENST00000475591 ARHGDIGQ99819 225 aa13.19□□□□□ -0.3
UBXN11-214ENST00000475591 CNPPD1Q9BV87 410 aa13.19□□□□□ -0.3
UBXN11-214ENST00000475591 MIR1-1HGQ9H1L0 117 aa13.19□□□□□ -0.3
UBXN11-214ENST00000475591 CAB39Q9Y376 341 aaPredicted RBP13.19□□□□□ -0.3
UBXN11-214ENST00000475591 RPL36Q9Y3U8 105 aaKnown RBP13.19□□□□□ -0.3
UBXN11-214ENST00000475591 VCANP13611 3396 aa13.19□□□□□ -0.3
UBXN11-214ENST00000475591 HNRNPA2B1P22626 353 aaKnown RBP13.18□□□□□ -0.3
UBXN11-214ENST00000475591 GTF2E2P29084 291 aaKnown RBP13.18□□□□□ -0.3
UBXN11-214ENST00000475591 SEPHS1P49903 392 aa13.18□□□□□ -0.3
UBXN11-214ENST00000475591 ALDH6A1Q02252 535 aaKnown RBP13.18□□□□□ -0.3
UBXN11-214ENST00000475591 SLC13A2Q13183 592 aa13.18□□□□□ -0.3
UBXN11-214ENST00000475591 SPHARQ15513 63 aa13.18□□□□□ -0.3
UBXN11-214ENST00000475591 SNAPC1Q16533 368 aa13.18□□□□□ -0.3
UBXN11-214ENST00000475591 TRMT12Q53H54 448 aaKnown RBP13.18□□□□□ -0.3
UBXN11-214ENST00000475591 FIGLAQ6QHK4 219 aa13.18□□□□□ -0.3
UBXN11-214ENST00000475591 CD300LDQ6UXZ3 194 aa13.18□□□□□ -0.3
UBXN11-214ENST00000475591 FRRS1Q6ZNA5 592 aa13.18□□□□□ -0.3
UBXN11-214ENST00000475591 SLC22A16Q86VW1 577 aa13.18□□□□□ -0.3
UBXN11-214ENST00000475591 OR52I1Q8NGK6 324 aa13.18□□□□□ -0.3
UBXN11-214ENST00000475591 OR52P1PQ8NH57 321 aa13.18□□□□□ -0.3
UBXN11-214ENST00000475591 NT5CQ8TCD5 201 aa13.18□□□□□ -0.3
UBXN11-214ENST00000475591 PPP1R14BQ96C90 147 aa13.18□□□□□ -0.3
UBXN11-214ENST00000475591 TRNT1Q96Q11 434 aaKnown RBP13.18□□□□□ -0.3
UBXN11-214ENST00000475591 KCNS3Q9BQ31 491 aa13.18□□□□□ -0.3
UBXN11-214ENST00000475591 POLDIP3Q9BY77 421 aaKnown RBP13.18□□□□□ -0.3
UBXN11-214ENST00000475591 NXF2Q9GZY0 626 aaKnown RBP13.18□□□□□ -0.3
UBXN11-214ENST00000475591 CLDND1Q9NY35 253 aa13.18□□□□□ -0.3
UBXN11-214ENST00000475591 ACTR10Q9NZ32 417 aa13.18□□□□□ -0.3
UBXN11-214ENST00000475591 IL20RAQ9UHF4 553 aa13.18□□□□□ -0.3
UBXN11-214ENST00000475591 SLC13A4Q9UKG4 626 aa13.18□□□□□ -0.3
UBXN11-214ENST00000475591 FANCMQ8IYD8 2048 aa13.18□□□□□ -0.3
UBXN11-214ENST00000475591 PNMA8CA0A1B0GUJ8 204 aa13.18□□□□□ -0.3
UBXN11-214ENST00000475591 PIP5K1CO60331 668 aa13.18□□□□□ -0.3
UBXN11-214ENST00000475591 LDB3O75112 727 aa13.18□□□□□ -0.3
UBXN11-214ENST00000475591 CH25HO95992 272 aa13.18□□□□□ -0.3
UBXN11-214ENST00000475591 SCG5P05408 212 aa13.18□□□□□ -0.3
UBXN11-214ENST00000475591 NDUFS1P28331 727 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms