RNA–Protein interactions for RNA: ENST00000474617.1

CCM2-206, Transcript of CCM2 scaffold protein, humanhuman

TSL 5 BASIC

Gene CCM2, Length 1,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-206ENST00000474617 CDC14AQ9UNH5 594 aa20.35■□□□□ 0.85
CCM2-206ENST00000474617 MRPS2Q9Y399 296 aaKnown RBP20.35■□□□□ 0.85
CCM2-206ENST00000474617 CCDC163A0A0D9SF12 145 aa20.34■□□□□ 0.85
CCM2-206ENST00000474617 A0A1W2PS29 197 aa20.34■□□□□ 0.85
CCM2-206ENST00000474617 CLDN4O14493 209 aa20.34■□□□□ 0.85
CCM2-206ENST00000474617 AP3D1O14617 1153 aa20.34■□□□□ 0.85
CCM2-206ENST00000474617 SEMA7AO75326 666 aa20.34■□□□□ 0.85
CCM2-206ENST00000474617 OR5F1O95221 314 aa20.34■□□□□ 0.85
CCM2-206ENST00000474617 IL9P15248 144 aa20.34■□□□□ 0.85
CCM2-206ENST00000474617 FOSL2P15408 326 aa20.34■□□□□ 0.85
CCM2-206ENST00000474617 NT5EP21589 574 aa20.34■□□□□ 0.85
CCM2-206ENST00000474617 ALDH4A1P30038 563 aa20.34■□□□□ 0.85
CCM2-206ENST00000474617 GALNSP34059 522 aa20.34■□□□□ 0.85
CCM2-206ENST00000474617 IDH2P48735 452 aaKnown RBP20.34■□□□□ 0.85
CCM2-206ENST00000474617 TBCEQ15813 527 aaPredicted RBP20.34■□□□□ 0.85
CCM2-206ENST00000474617 C1orf94Q6P1W5 598 aa20.34■□□□□ 0.85
CCM2-206ENST00000474617 FRRS1Q6ZNA5 592 aa20.34■□□□□ 0.85
CCM2-206ENST00000474617 SLC16A11Q8NCK7 471 aa20.34■□□□□ 0.85
CCM2-206ENST00000474617 OR4D11Q8NGI4 311 aa20.34■□□□□ 0.85
CCM2-206ENST00000474617 FAR1Q8WVX9 515 aa20.34■□□□□ 0.85
CCM2-206ENST00000474617 OTUB1Q96FW1 271 aaPredicted RBP20.34■□□□□ 0.85
CCM2-206ENST00000474617 COPS4Q9BT78 406 aa20.34■□□□□ 0.85
CCM2-206ENST00000474617 FAM60AQ9NP50 221 aa20.34■□□□□ 0.85
CCM2-206ENST00000474617 PDE7BQ9NP56 450 aa20.34■□□□□ 0.85
CCM2-206ENST00000474617 RASSF1Q9NS23 344 aa20.34■□□□□ 0.85
CCM2-206ENST00000474617 MAT2BQ9NZL9 334 aa20.34■□□□□ 0.85
CCM2-206ENST00000474617 RHCGQ9UBD6 479 aa20.34■□□□□ 0.85
CCM2-206ENST00000474617 SLCO1B1Q9Y6L6 691 aa20.34■□□□□ 0.85
CCM2-206ENST00000474617 TMEM131Q92545 1883 aa20.34■□□□□ 0.85
CCM2-206ENST00000474617 FITM1A5D6W6 292 aa20.33■□□□□ 0.85
CCM2-206ENST00000474617 H0YIG0 161 aa20.33■□□□□ 0.85
CCM2-206ENST00000474617 M0R3H8 397 aa20.33■□□□□ 0.85
CCM2-206ENST00000474617 HOXA6P31267 233 aa20.33■□□□□ 0.85
CCM2-206ENST00000474617 MAP3K8P41279 467 aa20.33■□□□□ 0.85
CCM2-206ENST00000474617 MLLT3P42568 568 aaPredicted RBP20.33■□□□□ 0.85
CCM2-206ENST00000474617 AVPR1BP47901 424 aa20.33■□□□□ 0.85
CCM2-206ENST00000474617 TAS2R41P59536 307 aa20.33■□□□□ 0.85
CCM2-206ENST00000474617 IGLV3-21P80748 117 aaPredicted RBP20.33■□□□□ 0.85
CCM2-206ENST00000474617 ENTPD8Q5MY95 495 aa20.33■□□□□ 0.85
CCM2-206ENST00000474617 MED25Q71SY5 747 aa20.33■□□□□ 0.85
CCM2-206ENST00000474617 DGLUCYQ7Z3D6 616 aa20.33■□□□□ 0.85
CCM2-206ENST00000474617 ZNF438Q7Z4V0 828 aa20.33■□□□□ 0.85
CCM2-206ENST00000474617 ZNF619Q8N2I2 560 aa20.33■□□□□ 0.85
CCM2-206ENST00000474617 SLC9A6Q92581 669 aa20.33■□□□□ 0.85
CCM2-206ENST00000474617 CDX2Q99626 313 aaPredicted RBP20.33■□□□□ 0.85
CCM2-206ENST00000474617 RSPO3Q9BXY4 272 aaPredicted RBP20.33■□□□□ 0.85
CCM2-206ENST00000474617 PRRG3Q9BZD7 231 aa20.33■□□□□ 0.85
CCM2-206ENST00000474617 MIR1-1HGQ9H1L0 117 aa20.33■□□□□ 0.85
CCM2-206ENST00000474617 ERVK-18Q9QC07 812 aa20.33■□□□□ 0.85
CCM2-206ENST00000474617 REV1Q9UBZ9 1251 aa20.33■□□□□ 0.85
CCM2-206ENST00000474617 WARS2Q9UGM6 360 aaKnown RBP20.33■□□□□ 0.85
CCM2-206ENST00000474617 ZNF443Q9Y2A4 671 aaPredicted RBP20.33■□□□□ 0.85
CCM2-206ENST00000474617 KCNE3Q9Y6H6 103 aa20.33■□□□□ 0.85
CCM2-206ENST00000474617 CACNA1IQ9P0X4 2223 aa20.33■□□□□ 0.84
CCM2-206ENST00000474617 ZNF860A6NHJ4 632 aa20.32■□□□□ 0.84
CCM2-206ENST00000474617 AGAP5A6NIR3 686 aa20.32■□□□□ 0.84
CCM2-206ENST00000474617 RHPN2P1A8MT19 583 aa20.32■□□□□ 0.84
CCM2-206ENST00000474617 CHST10O43529 356 aa20.32■□□□□ 0.84
CCM2-206ENST00000474617 FMO6PO60774 539 aa20.32■□□□□ 0.84
CCM2-206ENST00000474617 CTNSO60931 367 aa20.32■□□□□ 0.84
CCM2-206ENST00000474617 PIAS2O75928 621 aa20.32■□□□□ 0.84
CCM2-206ENST00000474617 ZBTB11O95625 1053 aaPredicted RBP20.32■□□□□ 0.84
CCM2-206ENST00000474617 CCNYL3P0C7X3 344 aa20.32■□□□□ 0.84
CCM2-206ENST00000474617 PIPP12273 146 aaPredicted RBP20.32■□□□□ 0.84
CCM2-206ENST00000474617 RPS4Y1P22090 263 aaKnown RBP20.32■□□□□ 0.84
CCM2-206ENST00000474617 ACVR2AP27037 513 aa20.32■□□□□ 0.84
CCM2-206ENST00000474617 GPR3P46089 330 aa20.32■□□□□ 0.84
CCM2-206ENST00000474617 PPP1CAP62136 330 aa20.32■□□□□ 0.84
CCM2-206ENST00000474617 OLR1P78380 273 aa20.32■□□□□ 0.84
CCM2-206ENST00000474617 PIN1Q13526 163 aaPredicted RBP20.32■□□□□ 0.84
CCM2-206ENST00000474617 UBE2UQ5VVX9 321 aa20.32■□□□□ 0.84
CCM2-206ENST00000474617 TYW3Q6IPR3 259 aaKnown RBP20.32■□□□□ 0.84
CCM2-206ENST00000474617 PODNL1Q6PEZ8 512 aa20.32■□□□□ 0.84
CCM2-206ENST00000474617 ZNF761Q86XN6 746 aaPredicted RBP20.32■□□□□ 0.84
CCM2-206ENST00000474617 LACC1Q8IV20 430 aa20.32■□□□□ 0.84
CCM2-206ENST00000474617 SFTPA2Q8IWL1 248 aa20.32■□□□□ 0.84
CCM2-206ENST00000474617 CDS1Q92903 461 aa20.32■□□□□ 0.84
CCM2-206ENST00000474617 ANKRD9Q96BM1 317 aaPredicted RBP20.32■□□□□ 0.84
CCM2-206ENST00000474617 SDF2Q99470 211 aa20.32■□□□□ 0.84
CCM2-206ENST00000474617 SPTBN5Q9NRC6 3674 aaKnown RBP20.32■□□□□ 0.84
CCM2-206ENST00000474617 SGK494L7N484 410 aa20.32■□□□□ 0.84
CCM2-206ENST00000474617 ZNF749O43361 778 aa20.32■□□□□ 0.84
CCM2-206ENST00000474617 NUDT21O43809 227 aaKnown RBP20.32■□□□□ 0.84
CCM2-206ENST00000474617 OR10H2O60403 315 aa20.32■□□□□ 0.84
CCM2-206ENST00000474617 RDH16O75452 317 aa20.32■□□□□ 0.84
CCM2-206ENST00000474617 CYP7B1O75881 506 aa20.32■□□□□ 0.84
CCM2-206ENST00000474617 EPPINO95925 133 aa20.32■□□□□ 0.84
CCM2-206ENST00000474617 ACP2P11117 423 aa20.32■□□□□ 0.84
CCM2-206ENST00000474617 PDX1P52945 283 aa20.32■□□□□ 0.84
CCM2-206ENST00000474617 RGS8P57771 180 aaPredicted RBP20.32■□□□□ 0.84
CCM2-206ENST00000474617 TARDBPQ13148 414 aaKnown RBP eCLIP20.32■□□□□ 0.84
CCM2-206ENST00000474617 SEC23BQ15437 767 aa20.32■□□□□ 0.84
CCM2-206ENST00000474617 ZNHIT3Q15649 155 aaPredicted RBP20.32■□□□□ 0.84
CCM2-206ENST00000474617 DUSP5Q16690 384 aa20.32■□□□□ 0.84
CCM2-206ENST00000474617 TMEM201Q5SNT2 666 aa20.32■□□□□ 0.84
CCM2-206ENST00000474617 SLC25A30Q5SVS4 291 aa20.32■□□□□ 0.84
CCM2-206ENST00000474617 CASP12Q6UXS9 341 aa20.32■□□□□ 0.84
CCM2-206ENST00000474617 LINC00299Q6ZSB3 139 aa20.32■□□□□ 0.84
CCM2-206ENST00000474617 PTCHD4Q6ZW05 846 aa20.32■□□□□ 0.84
CCM2-206ENST00000474617 PRSS41Q7RTY9 318 aa20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms