RNA–Protein interactions for RNA: ENST00000473969.6

USF1-205, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 1,092 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-205ENST00000473969 SPPL2AQ8TCT8 520 aa12.65□□□□□ -0.38
USF1-205ENST00000473969 SLC9A6Q92581 669 aa12.65□□□□□ -0.38
USF1-205ENST00000473969 JADE3Q92613 823 aa12.65□□□□□ -0.38
USF1-205ENST00000473969 TESCQ96BS2 214 aa12.65□□□□□ -0.38
USF1-205ENST00000473969 MAELQ96JY0 434 aaKnown RBP12.65□□□□□ -0.38
USF1-205ENST00000473969 COL21A1Q96P44 957 aa12.65□□□□□ -0.38
USF1-205ENST00000473969 MS4A4EQ96PG1 132 aa12.65□□□□□ -0.38
USF1-205ENST00000473969 TSPAN10Q9H1Z9 355 aaPredicted RBP12.65□□□□□ -0.38
USF1-205ENST00000473969 FAF1Q9UNN5 650 aaPredicted RBP12.65□□□□□ -0.38
USF1-205ENST00000473969 CHCHD2Q9Y6H1 151 aaPredicted RBP12.65□□□□□ -0.38
USF1-205ENST00000473969 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.65□□□□□ -0.38
USF1-205ENST00000473969 BSNQ9UPA5 3926 aa12.65□□□□□ -0.39
USF1-205ENST00000473969 ANKRD33BA6NCL7 494 aa12.64□□□□□ -0.39
USF1-205ENST00000473969 OR6C70A6NIJ9 312 aa12.64□□□□□ -0.39
USF1-205ENST00000473969 E9PBE3 544 aa12.64□□□□□ -0.39
USF1-205ENST00000473969 RNASET2O00584 256 aaKnown RBP12.64□□□□□ -0.39
USF1-205ENST00000473969 ASNA1O43681 348 aa12.64□□□□□ -0.39
USF1-205ENST00000473969 NME6O75414 186 aaPredicted RBP12.64□□□□□ -0.39
USF1-205ENST00000473969 SOX30O94993 753 aa12.64□□□□□ -0.39
USF1-205ENST00000473969 SNX4O95219 450 aa12.64□□□□□ -0.39
USF1-205ENST00000473969 KCNH1O95259 989 aa12.64□□□□□ -0.39
USF1-205ENST00000473969 ZIC2O95409 532 aaPredicted RBP12.64□□□□□ -0.39
USF1-205ENST00000473969 KRT16P08779 473 aa12.64□□□□□ -0.39
USF1-205ENST00000473969 ALOX5P09917 674 aa12.64□□□□□ -0.39
USF1-205ENST00000473969 ALDOCP09972 364 aaKnown RBP12.64□□□□□ -0.39
USF1-205ENST00000473969 CT45A8P0DMV1 189 aa12.64□□□□□ -0.39
USF1-205ENST00000473969 CT45A9P0DMV2 189 aa12.64□□□□□ -0.39
USF1-205ENST00000473969 GABRA3P34903 492 aa12.64□□□□□ -0.39
USF1-205ENST00000473969 UQCRFS1P47985 274 aa12.64□□□□□ -0.39
USF1-205ENST00000473969 DNASE1L1P49184 302 aa12.64□□□□□ -0.39
USF1-205ENST00000473969 CCT3P49368 545 aaKnown RBP12.64□□□□□ -0.39
USF1-205ENST00000473969 AQP5P55064 265 aa12.64□□□□□ -0.39
USF1-205ENST00000473969 CASP6P55212 293 aa12.64□□□□□ -0.39
USF1-205ENST00000473969 UFM1P61960 85 aa12.64□□□□□ -0.39
USF1-205ENST00000473969 TP53BP2Q13625 1128 aa12.64□□□□□ -0.39
USF1-205ENST00000473969 EIF2S3LQ2VIR3 472 aaKnown RBP12.64□□□□□ -0.39
USF1-205ENST00000473969 CT45A2Q5DJT8 189 aa12.64□□□□□ -0.39
USF1-205ENST00000473969 OR4F3Q6IEY1 312 aa12.64□□□□□ -0.39
USF1-205ENST00000473969 GHDCQ8N2G8 530 aa12.64□□□□□ -0.39
USF1-205ENST00000473969 GLB1L3Q8NCI6 653 aaPredicted RBP12.64□□□□□ -0.39
USF1-205ENST00000473969 OR8J2Q8NGG1 315 aa12.64□□□□□ -0.39
USF1-205ENST00000473969 OR4A15Q8NGL6 344 aa12.64□□□□□ -0.39
USF1-205ENST00000473969 GPR151Q8TDV0 419 aa12.64□□□□□ -0.39
USF1-205ENST00000473969 GPR137Q96N19 417 aa12.64□□□□□ -0.39
USF1-205ENST00000473969 ADOQ96SZ5 270 aa12.64□□□□□ -0.39
USF1-205ENST00000473969 IL1RL2Q9HB29 575 aa12.64□□□□□ -0.39
USF1-205ENST00000473969 SH2D2AQ9NP31 389 aa12.64□□□□□ -0.39
USF1-205ENST00000473969 TCF7L2Q9NQB0 619 aa12.64□□□□□ -0.39
USF1-205ENST00000473969 DEPPQ9NTK1 212 aa12.64□□□□□ -0.39
USF1-205ENST00000473969 KLRF1Q9NZS2 232 aa12.64□□□□□ -0.39
USF1-205ENST00000473969 B4GALT7Q9UBV7 327 aa12.64□□□□□ -0.39
USF1-205ENST00000473969 CNOT11Q9UKZ1 510 aaKnown RBP12.64□□□□□ -0.39
USF1-205ENST00000473969 CBLCQ9ULV8 474 aa12.64□□□□□ -0.39
USF1-205ENST00000473969 PRSS51A0A1B0GVH4 220 aa12.63□□□□□ -0.39
USF1-205ENST00000473969 FAM166BA8MTA8 275 aa12.63□□□□□ -0.39
USF1-205ENST00000473969 CDC40O60508 579 aaKnown RBP eCLIP12.63□□□□□ -0.39
USF1-205ENST00000473969 SLC22A3O75751 556 aa12.63□□□□□ -0.39
USF1-205ENST00000473969 PSMG1O95456 288 aa12.63□□□□□ -0.39
USF1-205ENST00000473969 CPSF4O95639 269 aaKnown RBP12.63□□□□□ -0.39
USF1-205ENST00000473969 RFX3P48380 749 aa12.63□□□□□ -0.39
USF1-205ENST00000473969 CLK3P49761 638 aaKnown RBP12.63□□□□□ -0.39
USF1-205ENST00000473969 TDGF1P3P51864 188 aa12.63□□□□□ -0.39
USF1-205ENST00000473969 PNLIPRP2P54317 469 aa12.63□□□□□ -0.39
USF1-205ENST00000473969 KCNK10P57789 538 aa12.63□□□□□ -0.39
USF1-205ENST00000473969 PSG6Q00889 435 aa12.63□□□□□ -0.39
USF1-205ENST00000473969 LRRC74AQ0VAA2 488 aa12.63□□□□□ -0.39
USF1-205ENST00000473969 SNTA1Q13424 505 aa12.63□□□□□ -0.39
USF1-205ENST00000473969 GAB1Q13480 694 aa12.63□□□□□ -0.39
USF1-205ENST00000473969 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.63□□□□□ -0.39
USF1-205ENST00000473969 FAM174BQ3ZCQ3 159 aa12.63□□□□□ -0.39
USF1-205ENST00000473969 PDCD4Q53EL6 469 aaKnown RBP12.63□□□□□ -0.39
USF1-205ENST00000473969 SLC30A6Q6NXT4 461 aa12.63□□□□□ -0.39
USF1-205ENST00000473969 NPSR1Q6W5P4 371 aa12.63□□□□□ -0.39
USF1-205ENST00000473969 MAVSQ7Z434 540 aa12.63□□□□□ -0.39
USF1-205ENST00000473969 MIER2Q8N344 545 aa12.63□□□□□ -0.39
USF1-205ENST00000473969 SFXN5Q8TD22 340 aa12.63□□□□□ -0.39
USF1-205ENST00000473969 ADAMTS15Q8TE58 950 aa12.63□□□□□ -0.39
USF1-205ENST00000473969 NUDT8Q8WV74 236 aa12.63□□□□□ -0.39
USF1-205ENST00000473969 FAM120BQ96EK7 910 aaKnown RBP12.63□□□□□ -0.39
USF1-205ENST00000473969 DTNBP1Q96EV8 351 aa12.63□□□□□ -0.39
USF1-205ENST00000473969 ZNF597Q96LX8 424 aa12.63□□□□□ -0.39
USF1-205ENST00000473969 OR52B2Q96RD2 323 aa12.63□□□□□ -0.39
USF1-205ENST00000473969 LMF2Q9BU23 707 aaKnown RBP12.63□□□□□ -0.39
USF1-205ENST00000473969 CCDC28BQ9BUN5 200 aa12.63□□□□□ -0.39
USF1-205ENST00000473969 TTTY12Q9BZ98 90 aa12.63□□□□□ -0.39
USF1-205ENST00000473969 ZFP64Q9NPA5 681 aa12.63□□□□□ -0.39
USF1-205ENST00000473969 ASH1LQ9NR48 2969 aaKnown RBP12.63□□□□□ -0.39
USF1-205ENST00000473969 FAM120CQ9NX05 1096 aaKnown RBP12.63□□□□□ -0.39
USF1-205ENST00000473969 TUBA8Q9NY65 449 aaPredicted RBP12.63□□□□□ -0.39
USF1-205ENST00000473969 NTMQ9P121 344 aa12.63□□□□□ -0.39
USF1-205ENST00000473969 OSGIN2Q9Y236 505 aa12.63□□□□□ -0.39
USF1-205ENST00000473969 PCDHGB3Q9Y5G1 929 aa12.63□□□□□ -0.39
USF1-205ENST00000473969 GPR45Q9Y5Y3 372 aa12.63□□□□□ -0.39
USF1-205ENST00000473969 A0A0G2JMM0 328 aa12.62□□□□□ -0.39
USF1-205ENST00000473969 A0A1W2PPB8 328 aa12.62□□□□□ -0.39
USF1-205ENST00000473969 A0A1W2PRS3 328 aa12.62□□□□□ -0.39
USF1-205ENST00000473969 PINLYPA6NC86 204 aa12.62□□□□□ -0.39
USF1-205ENST00000473969 KIR3DP1A8MWS1 328 aa12.62□□□□□ -0.39
USF1-205ENST00000473969 ZNF195O14628 629 aa12.62□□□□□ -0.39
USF1-205ENST00000473969 UGT2B11O75310 529 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms