RNA–Protein interactions for RNA: ENST00000473879.1

BRAT1-205, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-205ENST00000473879 ART5Q96L15 291 aa12.33□□□□□ -0.44
BRAT1-205ENST00000473879 ZNF583Q96ND8 569 aa12.33□□□□□ -0.44
BRAT1-205ENST00000473879 ZNF552Q9H707 407 aaPredicted RBP12.33□□□□□ -0.44
BRAT1-205ENST00000473879 CXorf21Q9HAI6 301 aa12.33□□□□□ -0.44
BRAT1-205ENST00000473879 FAF1Q9UNN5 650 aaPredicted RBP12.33□□□□□ -0.44
BRAT1-205ENST00000473879 C19orf53Q9UNZ5 99 aaPredicted RBP12.33□□□□□ -0.44
BRAT1-205ENST00000473879 SNX13Q9Y5W8 968 aa12.33□□□□□ -0.44
BRAT1-205ENST00000473879 SCN2AQ99250 2005 aa12.33□□□□□ -0.44
BRAT1-205ENST00000473879 MYOCOSA0A1B0GUC4 107 aa12.32□□□□□ -0.44
BRAT1-205ENST00000473879 TMEM247A6NEH6 219 aa12.32□□□□□ -0.44
BRAT1-205ENST00000473879 MASP2O00187 686 aa12.32□□□□□ -0.44
BRAT1-205ENST00000473879 UPK1AO00322 258 aa12.32□□□□□ -0.44
BRAT1-205ENST00000473879 WISP1O95388 367 aa12.32□□□□□ -0.44
BRAT1-205ENST00000473879 ALPPP05187 535 aa12.32□□□□□ -0.44
BRAT1-205ENST00000473879 BMP2P12643 396 aa12.32□□□□□ -0.44
BRAT1-205ENST00000473879 TNNI3P19429 210 aa12.32□□□□□ -0.44
BRAT1-205ENST00000473879 MATN1P21941 496 aa12.32□□□□□ -0.44
BRAT1-205ENST00000473879 PTGER1P34995 402 aa12.32□□□□□ -0.44
BRAT1-205ENST00000473879 MVDP53602 400 aa12.32□□□□□ -0.44
BRAT1-205ENST00000473879 MRPS35P82673 323 aaKnown RBP12.32□□□□□ -0.44
BRAT1-205ENST00000473879 RBBP4Q09028 425 aa12.32□□□□□ -0.44
BRAT1-205ENST00000473879 RAPSNQ13702 412 aa12.32□□□□□ -0.44
BRAT1-205ENST00000473879 FXNQ16595 210 aa12.32□□□□□ -0.44
BRAT1-205ENST00000473879 FAM111BQ6SJ93 734 aa12.32□□□□□ -0.44
BRAT1-205ENST00000473879 IGFL3Q6UXB1 125 aa12.32□□□□□ -0.44
BRAT1-205ENST00000473879 DHFR2Q86XF0 187 aa12.32□□□□□ -0.44
BRAT1-205ENST00000473879 SLC30A8Q8IWU4 369 aa12.32□□□□□ -0.44
BRAT1-205ENST00000473879 C10orf67Q8IYJ2 551 aa12.32□□□□□ -0.44
BRAT1-205ENST00000473879 C11orf65Q8NCR3 313 aa12.32□□□□□ -0.44
BRAT1-205ENST00000473879 OR14A16Q8NHC5 309 aa12.32□□□□□ -0.44
BRAT1-205ENST00000473879 MIPOL1Q8TD10 442 aa12.32□□□□□ -0.44
BRAT1-205ENST00000473879 DAZLQ92904 295 aaKnown RBP12.32□□□□□ -0.44
BRAT1-205ENST00000473879 TSLPQ969D9 159 aa12.32□□□□□ -0.44
BRAT1-205ENST00000473879 PPWD1Q96BP3 646 aaKnown RBP12.32□□□□□ -0.44
BRAT1-205ENST00000473879 CTHRC1Q96CG8 243 aa12.32□□□□□ -0.44
BRAT1-205ENST00000473879 LRGUKQ96M69 825 aa12.32□□□□□ -0.44
BRAT1-205ENST00000473879 MESP1Q9BRJ9 268 aa12.32□□□□□ -0.44
BRAT1-205ENST00000473879 PIF1Q9H611 641 aa12.32□□□□□ -0.44
BRAT1-205ENST00000473879 TMEM38AQ9H6F2 299 aa12.32□□□□□ -0.44
BRAT1-205ENST00000473879 PNO1Q9NRX1 252 aaKnown RBP12.32□□□□□ -0.44
BRAT1-205ENST00000473879 GPATCH2Q9NW75 528 aa12.32□□□□□ -0.44
BRAT1-205ENST00000473879 ACTR3BQ9P1U1 418 aa12.32□□□□□ -0.44
BRAT1-205ENST00000473879 C19orf25Q9UFG5 118 aaPredicted RBP12.32□□□□□ -0.44
BRAT1-205ENST00000473879 OR2W5A6NFC9 320 aa12.31□□□□□ -0.44
BRAT1-205ENST00000473879 DUXAA6NLW8 204 aa12.31□□□□□ -0.44
BRAT1-205ENST00000473879 C17orf105B2RV13 164 aa12.31□□□□□ -0.44
BRAT1-205ENST00000473879 ARPC2O15144 300 aa12.31□□□□□ -0.44
BRAT1-205ENST00000473879 ASNA1O43681 348 aa12.31□□□□□ -0.44
BRAT1-205ENST00000473879 PRAMEF2O60811 474 aa12.31□□□□□ -0.44
BRAT1-205ENST00000473879 ALOX12BO75342 701 aa12.31□□□□□ -0.44
BRAT1-205ENST00000473879 TNFRSF21O75509 655 aa12.31□□□□□ -0.44
BRAT1-205ENST00000473879 SORBS2O94875 1100 aaKnown RBP12.31□□□□□ -0.44
BRAT1-205ENST00000473879 SOX30O94993 753 aa12.31□□□□□ -0.44
BRAT1-205ENST00000473879 AGR2O95994 175 aa12.31□□□□□ -0.44
BRAT1-205ENST00000473879 HMGN2P05204 90 aaKnown RBP12.31□□□□□ -0.44
BRAT1-205ENST00000473879 COX6A1P12074 109 aa12.31□□□□□ -0.44
BRAT1-205ENST00000473879 ETFAP13804 333 aa12.31□□□□□ -0.44
BRAT1-205ENST00000473879 ITGA3P26006 1051 aa12.31□□□□□ -0.44
BRAT1-205ENST00000473879 GZMMP51124 257 aa12.31□□□□□ -0.44
BRAT1-205ENST00000473879 OR4D2P58180 307 aa12.31□□□□□ -0.44
BRAT1-205ENST00000473879 ACTR3P61158 418 aa12.31□□□□□ -0.44
BRAT1-205ENST00000473879 ELF3P78545 371 aaPredicted RBP12.31□□□□□ -0.44
BRAT1-205ENST00000473879 MGAT2Q10469 447 aa12.31□□□□□ -0.44
BRAT1-205ENST00000473879 LASP1Q14847 261 aaKnown RBP12.31□□□□□ -0.44
BRAT1-205ENST00000473879 KPNB1Q14974 876 aaKnown RBP12.31□□□□□ -0.44
BRAT1-205ENST00000473879 ZNF630Q2M218 657 aaPredicted RBP12.31□□□□□ -0.44
BRAT1-205ENST00000473879 VMACQ2NL98 169 aa12.31□□□□□ -0.44
BRAT1-205ENST00000473879 NADK2Q4G0N4 442 aa12.31□□□□□ -0.44
BRAT1-205ENST00000473879 MTX3Q5HYI7 312 aa12.31□□□□□ -0.44
BRAT1-205ENST00000473879 COX20Q5RI15 118 aa12.31□□□□□ -0.44
BRAT1-205ENST00000473879 FHL5Q5TD97 284 aa12.31□□□□□ -0.44
BRAT1-205ENST00000473879 LCN8Q6JVE9 175 aa12.31□□□□□ -0.44
BRAT1-205ENST00000473879 ZCCHC12Q6PEW1 402 aa12.31□□□□□ -0.44
BRAT1-205ENST00000473879 NDUFAF7Q7L592 441 aa12.31□□□□□ -0.44
BRAT1-205ENST00000473879 ZZZ3Q8IYH5 903 aa12.31□□□□□ -0.44
BRAT1-205ENST00000473879 LGI4Q8N135 537 aa12.31□□□□□ -0.44
BRAT1-205ENST00000473879 RBMXL3Q8N7X1 1067 aaKnown RBP12.31□□□□□ -0.44
BRAT1-205ENST00000473879 OR7G1Q8NGA0 311 aa12.31□□□□□ -0.44
BRAT1-205ENST00000473879 NCLNQ969V3 563 aa12.31□□□□□ -0.44
BRAT1-205ENST00000473879 C8orf44Q96CB5 159 aa12.31□□□□□ -0.44
BRAT1-205ENST00000473879 CNPPD1Q9BV87 410 aa12.31□□□□□ -0.44
BRAT1-205ENST00000473879 ACTRT3Q9BYD9 372 aa12.31□□□□□ -0.44
BRAT1-205ENST00000473879 LHPPQ9H008 270 aa12.31□□□□□ -0.44
BRAT1-205ENST00000473879 PCDHAC1Q9H158 963 aa12.31□□□□□ -0.44
BRAT1-205ENST00000473879 OR51I1Q9H343 314 aa12.31□□□□□ -0.44
BRAT1-205ENST00000473879 DENND2DQ9H6A0 471 aaPredicted RBP12.31□□□□□ -0.44
BRAT1-205ENST00000473879 EQTNQ9NQ60 294 aa12.31□□□□□ -0.44
BRAT1-205ENST00000473879 P2RX2Q9UBL9 471 aa12.31□□□□□ -0.44
BRAT1-205ENST00000473879 EGFL7Q9UHF1 273 aa12.31□□□□□ -0.44
BRAT1-205ENST00000473879 ZNF639Q9UID6 485 aa12.31□□□□□ -0.44
BRAT1-205ENST00000473879 CLCA3PQ9Y6N3 262 aa12.31□□□□□ -0.44
BRAT1-205ENST00000473879 PRRC2CQ9Y520 2896 aaKnown RBP12.3□□□□□ -0.44
BRAT1-205ENST00000473879 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.3□□□□□ -0.44
BRAT1-205ENST00000473879 IGHV1-45A0A0A0MS14 117 aa12.3□□□□□ -0.44
BRAT1-205ENST00000473879 NSG1A0A0A6YYJ2 146 aa12.3□□□□□ -0.44
BRAT1-205ENST00000473879 PYCARD-AS1I3L0S3 204 aa12.3□□□□□ -0.44
BRAT1-205ENST00000473879 ACOT8O14734 319 aa12.3□□□□□ -0.44
BRAT1-205ENST00000473879 ZIC2O95409 532 aaPredicted RBP12.3□□□□□ -0.44
BRAT1-205ENST00000473879 PSMG1O95456 288 aa12.3□□□□□ -0.44
BRAT1-205ENST00000473879 C1QCP02747 245 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms