RNA–Protein interactions for RNA: ENST00000473829.1

PTCD3-210, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-210ENST00000473829 VIPAS39Q9H9C1 493 aa17.36■□□□□ 0.37
PTCD3-210ENST00000473829 MEAF6Q9HAF1 191 aa17.36■□□□□ 0.37
PTCD3-210ENST00000473829 ZFP64Q9NPA5 681 aa17.36■□□□□ 0.37
PTCD3-210ENST00000473829 ACSS1Q9NUB1 689 aaPredicted RBP17.36■□□□□ 0.37
PTCD3-210ENST00000473829 EIF3LQ9Y262 564 aaKnown RBP17.36■□□□□ 0.37
PTCD3-210ENST00000473829 HRH3Q9Y5N1 445 aa17.36■□□□□ 0.37
PTCD3-210ENST00000473829 SETXQ7Z333 2677 aaKnown RBP17.35■□□□□ 0.37
PTCD3-210ENST00000473829 A0A1B0GUH1 482 aa17.35■□□□□ 0.37
PTCD3-210ENST00000473829 SDHDO14521 159 aa17.35■□□□□ 0.37
PTCD3-210ENST00000473829 TSPAN2O60636 221 aa17.35■□□□□ 0.37
PTCD3-210ENST00000473829 SASH3O75995 380 aa17.35■□□□□ 0.37
PTCD3-210ENST00000473829 GPC1P35052 558 aa17.35■□□□□ 0.37
PTCD3-210ENST00000473829 PTGDSP41222 190 aa17.35■□□□□ 0.37
PTCD3-210ENST00000473829 MANFP55145 182 aaKnown RBP17.35■□□□□ 0.37
PTCD3-210ENST00000473829 MAD2L1Q13257 205 aaPredicted RBP17.35■□□□□ 0.37
PTCD3-210ENST00000473829 TBCELQ5QJ74 424 aa17.35■□□□□ 0.37
PTCD3-210ENST00000473829 KIRREL3Q8IZU9 778 aa17.35■□□□□ 0.37
PTCD3-210ENST00000473829 SLC35A4Q96G79 324 aa17.35■□□□□ 0.37
PTCD3-210ENST00000473829 ZNF597Q96LX8 424 aa17.35■□□□□ 0.37
PTCD3-210ENST00000473829 JSRP1Q96MG2 331 aaPredicted RBP17.35■□□□□ 0.37
PTCD3-210ENST00000473829 SIRT3Q9NTG7 399 aaPredicted RBP17.35■□□□□ 0.37
PTCD3-210ENST00000473829 BOKQ9UMX3 212 aaPredicted RBP17.35■□□□□ 0.37
PTCD3-210ENST00000473829 MYO7BQ6PIF6 2116 aa17.35■□□□□ 0.37
PTCD3-210ENST00000473829 DNAJC13O75165 2243 aa17.35■□□□□ 0.37
PTCD3-210ENST00000473829 ICE1Q9Y2F5 2266 aa17.35■□□□□ 0.37
PTCD3-210ENST00000473829 GIMAP1-GIMAP5A0A087WTJ2 511 aa17.34■□□□□ 0.37
PTCD3-210ENST00000473829 REM1O75628 298 aa17.34■□□□□ 0.37
PTCD3-210ENST00000473829 IGHG3P01860 377 aa17.34■□□□□ 0.37
PTCD3-210ENST00000473829 KITP10721 976 aa17.34■□□□□ 0.37
PTCD3-210ENST00000473829 ABOP16442 354 aa17.34■□□□□ 0.37
PTCD3-210ENST00000473829 PRPS1L1P21108 318 aa17.34■□□□□ 0.37
PTCD3-210ENST00000473829 RPL3P39023 403 aaKnown RBP17.34■□□□□ 0.37
PTCD3-210ENST00000473829 CLDN8P56748 225 aa17.34■□□□□ 0.37
PTCD3-210ENST00000473829 C21orf58P58505 322 aa17.34■□□□□ 0.37
PTCD3-210ENST00000473829 ZNF800Q2TB10 664 aaPredicted RBP eCLIP17.34■□□□□ 0.37
PTCD3-210ENST00000473829 ATG16L1Q676U5 607 aa17.34■□□□□ 0.37
PTCD3-210ENST00000473829 LARP4Q71RC2 724 aaKnown RBP eCLIP17.34■□□□□ 0.37
PTCD3-210ENST00000473829 NUP54Q7Z3B4 507 aa17.34■□□□□ 0.37
PTCD3-210ENST00000473829 ZNF75CPQ92670 426 aaPredicted RBP17.34■□□□□ 0.37
PTCD3-210ENST00000473829 EFHD2Q96C19 240 aaPredicted RBP17.34■□□□□ 0.37
PTCD3-210ENST00000473829 COQ8BQ96D53 544 aa17.34■□□□□ 0.37
PTCD3-210ENST00000473829 GIMAP5Q96F15 307 aa17.34■□□□□ 0.37
PTCD3-210ENST00000473829 COL21A1Q96P44 957 aa17.34■□□□□ 0.37
PTCD3-210ENST00000473829 ADOQ96SZ5 270 aa17.34■□□□□ 0.37
PTCD3-210ENST00000473829 LMF2Q9BU23 707 aaKnown RBP17.34■□□□□ 0.37
PTCD3-210ENST00000473829 METTL7AQ9H8H3 244 aa17.34■□□□□ 0.37
PTCD3-210ENST00000473829 GALNT9Q9HCQ5 603 aa17.34■□□□□ 0.37
PTCD3-210ENST00000473829 EQTNQ9NQ60 294 aa17.34■□□□□ 0.37
PTCD3-210ENST00000473829 FREM3P0C091 2139 aa17.33■□□□□ 0.37
PTCD3-210ENST00000473829 C2orf72A6NCS6 295 aa17.33■□□□□ 0.36
PTCD3-210ENST00000473829 OR6C70A6NIJ9 312 aa17.33■□□□□ 0.36
PTCD3-210ENST00000473829 CCL21O00585 134 aa17.33■□□□□ 0.36
PTCD3-210ENST00000473829 KLF11O14901 512 aa17.33■□□□□ 0.36
PTCD3-210ENST00000473829 HDAC3O15379 428 aa17.33■□□□□ 0.36
PTCD3-210ENST00000473829 ZG16O60844 167 aa17.33■□□□□ 0.36
PTCD3-210ENST00000473829 ALDOCP09972 364 aaKnown RBP17.33■□□□□ 0.36
PTCD3-210ENST00000473829 PTGS2P35354 604 aa17.33■□□□□ 0.36
PTCD3-210ENST00000473829 MLC1Q15049 377 aa17.33■□□□□ 0.36
PTCD3-210ENST00000473829 CPTPQ5TA50 214 aa17.33■□□□□ 0.36
PTCD3-210ENST00000473829 TMEM81Q6P7N7 255 aa17.33■□□□□ 0.36
PTCD3-210ENST00000473829 C3P1Q6ZMU1 363 aa17.33■□□□□ 0.36
PTCD3-210ENST00000473829 NCCRP1Q6ZVX7 275 aaPredicted RBP17.33■□□□□ 0.36
PTCD3-210ENST00000473829 TRILQ7L0X0 811 aa17.33■□□□□ 0.36
PTCD3-210ENST00000473829 MAVSQ7Z434 540 aa17.33■□□□□ 0.36
PTCD3-210ENST00000473829 DOLPP1Q86YN1 238 aa17.33■□□□□ 0.36
PTCD3-210ENST00000473829 WDR75Q8IWA0 830 aaKnown RBP17.33■□□□□ 0.36
PTCD3-210ENST00000473829 TRIM42Q8IWZ5 723 aa17.33■□□□□ 0.36
PTCD3-210ENST00000473829 NUP43Q8NFH3 380 aa17.33■□□□□ 0.36
PTCD3-210ENST00000473829 HOXB13Q92826 284 aaPredicted RBP17.33■□□□□ 0.36
PTCD3-210ENST00000473829 OSBPL11Q9BXB4 747 aa17.33■□□□□ 0.36
PTCD3-210ENST00000473829 WDR55Q9H6Y2 383 aaPredicted RBP17.33■□□□□ 0.36
PTCD3-210ENST00000473829 NTMQ9P121 344 aa17.33■□□□□ 0.36
PTCD3-210ENST00000473829 OR10H1Q9Y4A9 318 aa17.33■□□□□ 0.36
PTCD3-210ENST00000473829 SPTBN1Q01082 2364 aaKnown RBP17.33■□□□□ 0.36
PTCD3-210ENST00000473829 GOLGA8QA0A0J9YX86 632 aa17.32■□□□□ 0.36
PTCD3-210ENST00000473829 A0A1W2PRB8 838 aa17.32■□□□□ 0.36
PTCD3-210ENST00000473829 A1L4Q6 167 aa17.32■□□□□ 0.36
PTCD3-210ENST00000473829 GOLGA8OA6NCC3 632 aa17.32■□□□□ 0.36
PTCD3-210ENST00000473829 PRAMEF25A6NGN4 478 aa17.32■□□□□ 0.36
PTCD3-210ENST00000473829 GOLGA8NF8WBI6 632 aa17.32■□□□□ 0.36
PTCD3-210ENST00000473829 GNB5O14775 395 aa17.32■□□□□ 0.36
PTCD3-210ENST00000473829 ANKRD28O15084 1053 aa17.32■□□□□ 0.36
PTCD3-210ENST00000473829 SNX4O95219 450 aa17.32■□□□□ 0.36
PTCD3-210ENST00000473829 C6orf47O95873 294 aa17.32■□□□□ 0.36
PTCD3-210ENST00000473829 LBPP18428 481 aa17.32■□□□□ 0.36
PTCD3-210ENST00000473829 ENDOUP21128 410 aaKnown RBP17.32■□□□□ 0.36
PTCD3-210ENST00000473829 EPHA3P29320 983 aa17.32■□□□□ 0.36
PTCD3-210ENST00000473829 MAP3K8P41279 467 aa17.32■□□□□ 0.36
PTCD3-210ENST00000473829 PRKAG1P54619 331 aa17.32■□□□□ 0.36
PTCD3-210ENST00000473829 RPP38P78345 283 aaKnown RBP17.32■□□□□ 0.36
PTCD3-210ENST00000473829 GAB1Q13480 694 aa17.32■□□□□ 0.36
PTCD3-210ENST00000473829 TMEM198Q66K66 360 aa17.32■□□□□ 0.36
PTCD3-210ENST00000473829 OGFOD2Q6N063 350 aa17.32■□□□□ 0.36
PTCD3-210ENST00000473829 ARHGAP11AQ6P4F7 1023 aa17.32■□□□□ 0.36
PTCD3-210ENST00000473829 SZRD1Q7Z422 152 aa17.32■□□□□ 0.36
PTCD3-210ENST00000473829 CAMKMTQ7Z624 323 aa17.32■□□□□ 0.36
PTCD3-210ENST00000473829 CD163Q86VB7 1156 aa17.32■□□□□ 0.36
PTCD3-210ENST00000473829 FBXO30Q8TB52 745 aa17.32■□□□□ 0.36
PTCD3-210ENST00000473829 FAM57AQ8TBR7 257 aa17.32■□□□□ 0.36
PTCD3-210ENST00000473829 RNF138Q8WVD3 245 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms