RNA–Protein interactions for RNA: ENST00000473684.5

TMEM39A-206, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 3,043 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-206ENST00000473684 TRMT10AQ8TBZ6 339 aaKnown RBP4.84□□□□□ -1.63
TMEM39A-206ENST00000473684 RXFP4Q8TDU9 374 aa4.84□□□□□ -1.63
TMEM39A-206ENST00000473684 SELENOMQ8WWX9 145 aa4.84□□□□□ -1.63
TMEM39A-206ENST00000473684 COA7Q96BR5 231 aa4.84□□□□□ -1.63
TMEM39A-206ENST00000473684 PABPC5Q96DU9 382 aaKnown RBP4.84□□□□□ -1.63
TMEM39A-206ENST00000473684 FAM122AQ96E09 287 aa4.84□□□□□ -1.63
TMEM39A-206ENST00000473684 LRIG1Q96JA1 1093 aa4.84□□□□□ -1.63
TMEM39A-206ENST00000473684 FCRL1Q96LA6 429 aa4.84□□□□□ -1.63
TMEM39A-206ENST00000473684 CCDC115Q96NT0 180 aa4.84□□□□□ -1.63
TMEM39A-206ENST00000473684 TEFMQ96QE5 360 aaKnown RBP4.84□□□□□ -1.63
TMEM39A-206ENST00000473684 MRPL57Q9BQC6 102 aaKnown RBP4.84□□□□□ -1.63
TMEM39A-206ENST00000473684 MAGIXQ9H6Y5 334 aa4.84□□□□□ -1.63
TMEM39A-206ENST00000473684 ABCB9Q9NP78 766 aa4.84□□□□□ -1.63
TMEM39A-206ENST00000473684 KLHL9Q9P2J3 617 aa4.84□□□□□ -1.63
TMEM39A-206ENST00000473684 PLA2G2DQ9UNK4 145 aa4.84□□□□□ -1.63
TMEM39A-206ENST00000473684 WASF3Q9UPY6 502 aa4.84□□□□□ -1.63
TMEM39A-206ENST00000473684 PKP3Q9Y446 797 aa4.84□□□□□ -1.63
TMEM39A-206ENST00000473684 PCDHA10Q9Y5I2 948 aa4.84□□□□□ -1.63
TMEM39A-206ENST00000473684 PCDHA1Q9Y5I3 950 aa4.84□□□□□ -1.63
TMEM39A-206ENST00000473684 COL1A2P08123 1366 aa4.84□□□□□ -1.63
TMEM39A-206ENST00000473684 OR6C68A6NDL8 312 aa4.84□□□□□ -1.63
TMEM39A-206ENST00000473684 CLCA1A8K7I4 914 aa4.84□□□□□ -1.63
TMEM39A-206ENST00000473684 TSTD3H0UI37 97 aa4.84□□□□□ -1.63
TMEM39A-206ENST00000473684 NDUFS8O00217 210 aa4.84□□□□□ -1.63
TMEM39A-206ENST00000473684 RP2O75695 350 aa4.84□□□□□ -1.63
TMEM39A-206ENST00000473684 OTCP00480 354 aa4.84□□□□□ -1.63
TMEM39A-206ENST00000473684 FHP07954 510 aa4.84□□□□□ -1.63
TMEM39A-206ENST00000473684 QDPRP09417 244 aa4.84□□□□□ -1.63
TMEM39A-206ENST00000473684 FAM86B2P0C5J1 330 aa4.84□□□□□ -1.63
TMEM39A-206ENST00000473684 CYP19A1P11511 503 aaPredicted RBP4.84□□□□□ -1.63
TMEM39A-206ENST00000473684 PFKLP17858 780 aa4.84□□□□□ -1.63
TMEM39A-206ENST00000473684 LBPP18428 481 aa4.84□□□□□ -1.63
TMEM39A-206ENST00000473684 SDC2P34741 201 aa4.84□□□□□ -1.63
TMEM39A-206ENST00000473684 MATKP42679 507 aa4.84□□□□□ -1.63
TMEM39A-206ENST00000473684 MRPL19P49406 292 aaKnown RBP4.84□□□□□ -1.63
TMEM39A-206ENST00000473684 GMPSP49915 693 aaPredicted RBP4.84□□□□□ -1.63
TMEM39A-206ENST00000473684 GATMP50440 423 aa4.84□□□□□ -1.63
TMEM39A-206ENST00000473684 RAB5CP51148 216 aa4.84□□□□□ -1.63
TMEM39A-206ENST00000473684 PPP3R1P63098 170 aa4.84□□□□□ -1.63
TMEM39A-206ENST00000473684 SKP1P63208 163 aa4.84□□□□□ -1.63
TMEM39A-206ENST00000473684 FABP9Q0Z7S8 132 aa4.84□□□□□ -1.63
TMEM39A-206ENST00000473684 GAGE1Q13065 139 aa4.84□□□□□ -1.63
TMEM39A-206ENST00000473684 TOMM34Q15785 309 aaPredicted RBP4.84□□□□□ -1.63
TMEM39A-206ENST00000473684 ARMC6Q6NXE6 501 aa4.84□□□□□ -1.63
TMEM39A-206ENST00000473684 GCNT7Q6ZNI0 430 aa4.84□□□□□ -1.63
TMEM39A-206ENST00000473684 TPGS1Q6ZTW0 290 aa4.84□□□□□ -1.63
TMEM39A-206ENST00000473684 USP30Q70CQ3 517 aa4.84□□□□□ -1.63
TMEM39A-206ENST00000473684 LARP4Q71RC2 724 aaKnown RBP eCLIP4.84□□□□□ -1.63
TMEM39A-206ENST00000473684 SLC44A3Q8N4M1 653 aa4.84□□□□□ -1.63
TMEM39A-206ENST00000473684 MCPH1Q8NEM0 835 aa4.84□□□□□ -1.63
TMEM39A-206ENST00000473684 THAP6Q8TBB0 222 aa4.84□□□□□ -1.63
TMEM39A-206ENST00000473684 RAB24Q969Q5 203 aa4.84□□□□□ -1.63
TMEM39A-206ENST00000473684 LRR1Q96L50 414 aa4.84□□□□□ -1.63
TMEM39A-206ENST00000473684 CASD1Q96PB1 797 aa4.84□□□□□ -1.63
TMEM39A-206ENST00000473684 LGMNQ99538 433 aa4.84□□□□□ -1.63
TMEM39A-206ENST00000473684 SOSTQ9BQB4 213 aa4.84□□□□□ -1.63
TMEM39A-206ENST00000473684 RHNO1Q9BSD3 238 aa4.84□□□□□ -1.63
TMEM39A-206ENST00000473684 TEX12Q9BXU0 123 aa4.84□□□□□ -1.63
TMEM39A-206ENST00000473684 EGLN1Q9GZT9 426 aa4.84□□□□□ -1.63
TMEM39A-206ENST00000473684 RIBC2Q9H4K1 309 aa4.84□□□□□ -1.63
TMEM39A-206ENST00000473684 TASP1Q9H6P5 420 aa4.84□□□□□ -1.63
TMEM39A-206ENST00000473684 ZNF541Q9H0D2 1346 aa4.84□□□□□ -1.63
TMEM39A-206ENST00000473684 ANXA2P2A6NMY6 339 aa4.83□□□□□ -1.64
TMEM39A-206ENST00000473684 TMEM233B4DJY2 109 aa4.83□□□□□ -1.64
TMEM39A-206ENST00000473684 F8VP50 259 aa4.83□□□□□ -1.64
TMEM39A-206ENST00000473684 MSH4O15457 936 aa4.83□□□□□ -1.64
TMEM39A-206ENST00000473684 SLC22A3O75751 556 aa4.83□□□□□ -1.64
TMEM39A-206ENST00000473684 LATS1O95835 1130 aa4.83□□□□□ -1.64
TMEM39A-206ENST00000473684 CELA3BP08861 270 aa4.83□□□□□ -1.64
TMEM39A-206ENST00000473684 TYRP14679 529 aa4.83□□□□□ -1.64
TMEM39A-206ENST00000473684 NPR2P20594 1047 aa4.83□□□□□ -1.64
TMEM39A-206ENST00000473684 PPM1AP35813 382 aa4.83□□□□□ -1.64
TMEM39A-206ENST00000473684 LHX1P48742 406 aa4.83□□□□□ -1.64
TMEM39A-206ENST00000473684 CSNK1EP49674 416 aaKnown RBP4.83□□□□□ -1.64
TMEM39A-206ENST00000473684 EMX2Q04743 252 aa4.83□□□□□ -1.64
TMEM39A-206ENST00000473684 SMN1Q16637 294 aaKnown RBP4.83□□□□□ -1.64
TMEM39A-206ENST00000473684 VPS26BQ4G0F5 336 aa4.83□□□□□ -1.64
TMEM39A-206ENST00000473684 SBK1Q52WX2 424 aa4.83□□□□□ -1.64
TMEM39A-206ENST00000473684 PLA1AQ53H76 456 aa4.83□□□□□ -1.64
TMEM39A-206ENST00000473684 ARHGAP15Q53QZ3 475 aa4.83□□□□□ -1.64
TMEM39A-206ENST00000473684 ZNF628Q5EBL2 1059 aa4.83□□□□□ -1.64
TMEM39A-206ENST00000473684 MANEAQ5SRI9 462 aa4.83□□□□□ -1.64
TMEM39A-206ENST00000473684 DNAJC24Q6P3W2 148 aa4.83□□□□□ -1.64
TMEM39A-206ENST00000473684 TMEM88Q6PEY1 159 aa4.83□□□□□ -1.64
TMEM39A-206ENST00000473684 MOXD1Q6UVY6 613 aa4.83□□□□□ -1.64
TMEM39A-206ENST00000473684 TMEM179Q6ZVK1 233 aa4.83□□□□□ -1.64
TMEM39A-206ENST00000473684 PDZD4Q76G19 769 aaPredicted RBP4.83□□□□□ -1.64
TMEM39A-206ENST00000473684 GLCCI1Q86VQ1 547 aa4.83□□□□□ -1.64
TMEM39A-206ENST00000473684 CIR1Q86X95 450 aaPredicted RBP4.83□□□□□ -1.64
TMEM39A-206ENST00000473684 CCDC71Q8IV32 467 aaPredicted RBP4.83□□□□□ -1.64
TMEM39A-206ENST00000473684 DENND1CQ8IV53 801 aa4.83□□□□□ -1.64
TMEM39A-206ENST00000473684 MISPQ8IVT2 679 aa4.83□□□□□ -1.64
TMEM39A-206ENST00000473684 PUSL1Q8N0Z8 303 aaKnown RBP4.83□□□□□ -1.64
TMEM39A-206ENST00000473684 ZFP82Q8N141 532 aa4.83□□□□□ -1.64
TMEM39A-206ENST00000473684 ZNF383Q8NA42 475 aa4.83□□□□□ -1.64
TMEM39A-206ENST00000473684 PLA2G15Q8NCC3 412 aa4.83□□□□□ -1.64
TMEM39A-206ENST00000473684 FBXL13Q8NEE6 735 aa4.83□□□□□ -1.64
TMEM39A-206ENST00000473684 FAM46DQ8NEK8 389 aa4.83□□□□□ -1.64
TMEM39A-206ENST00000473684 BPIFCQ8NFQ6 507 aa4.83□□□□□ -1.64
TMEM39A-206ENST00000473684 OR13C3Q8NGS6 347 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms