RNA–Protein interactions for RNA: ENST00000472892.1

VTI1A-203, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best)

Gene VTI1A, Length 1,247 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-203ENST00000472892 ARHGAP21Q5T5U3 1957 aa13.92□□□□□ -0.18
VTI1A-203ENST00000472892 EXPH5Q8NEV8 1989 aa13.92□□□□□ -0.18
VTI1A-203ENST00000472892 FAM221AA4D161 298 aa13.92□□□□□ -0.18
VTI1A-203ENST00000472892 MBD3L4A6NDZ8 208 aaPredicted RBP13.92□□□□□ -0.18
VTI1A-203ENST00000472892 MBD3L3A6NE82 208 aaPredicted RBP13.92□□□□□ -0.18
VTI1A-203ENST00000472892 MBD3L5A6NJ08 208 aaPredicted RBP13.92□□□□□ -0.18
VTI1A-203ENST00000472892 TSPAN2O60636 221 aa13.92□□□□□ -0.18
VTI1A-203ENST00000472892 REM1O75628 298 aa13.92□□□□□ -0.18
VTI1A-203ENST00000472892 DDCP20711 480 aa13.92□□□□□ -0.18
VTI1A-203ENST00000472892 UQCRC1P31930 480 aa13.92□□□□□ -0.18
VTI1A-203ENST00000472892 KIR2DL3P43628 341 aa13.92□□□□□ -0.18
VTI1A-203ENST00000472892 ASCL1P50553 236 aa13.92□□□□□ -0.18
VTI1A-203ENST00000472892 CORO7P57737 925 aa13.92□□□□□ -0.18
VTI1A-203ENST00000472892 SCIMPQ6UWF3 145 aa13.92□□□□□ -0.18
VTI1A-203ENST00000472892 ZYG11AQ6WRX3 759 aa13.92□□□□□ -0.18
VTI1A-203ENST00000472892 TRIM46Q7Z4K8 759 aa13.92□□□□□ -0.18
VTI1A-203ENST00000472892 PLCZ1Q86YW0 608 aa13.92□□□□□ -0.18
VTI1A-203ENST00000472892 ZZZ3Q8IYH5 903 aa13.92□□□□□ -0.18
VTI1A-203ENST00000472892 CCNYL1Q8N7R7 359 aa13.92□□□□□ -0.18
VTI1A-203ENST00000472892 EIF1ADQ8N9N8 165 aaKnown RBP13.92□□□□□ -0.18
VTI1A-203ENST00000472892 MBD3L2Q8NHZ7 208 aaPredicted RBP13.92□□□□□ -0.18
VTI1A-203ENST00000472892 RNF138Q8WVD3 245 aa13.92□□□□□ -0.18
VTI1A-203ENST00000472892 RNASE6Q93091 150 aaKnown RBP13.92□□□□□ -0.18
VTI1A-203ENST00000472892 TRIB1Q96RU8 372 aa13.92□□□□□ -0.18
VTI1A-203ENST00000472892 ADOQ96SZ5 270 aa13.92□□□□□ -0.18
VTI1A-203ENST00000472892 EBPLQ9BY08 206 aa13.92□□□□□ -0.18
VTI1A-203ENST00000472892 OR2B2Q9GZK3 357 aa13.92□□□□□ -0.18
VTI1A-203ENST00000472892 SERHLQ9NQF3 203 aa13.92□□□□□ -0.18
VTI1A-203ENST00000472892 TAS2R7Q9NYW3 318 aa13.92□□□□□ -0.18
VTI1A-203ENST00000472892 FOXD3Q9UJU5 478 aaPredicted RBP13.92□□□□□ -0.18
VTI1A-203ENST00000472892 WBP11Q9Y2W2 641 aaKnown RBP13.92□□□□□ -0.18
VTI1A-203ENST00000472892 SPG11Q96JI7 2443 aa13.91□□□□□ -0.18
VTI1A-203ENST00000472892 MYO1GB0I1T2 1018 aa13.91□□□□□ -0.18
VTI1A-203ENST00000472892 H3BQF6 201 aa13.91□□□□□ -0.18
VTI1A-203ENST00000472892 GLRA3O75311 464 aa13.91□□□□□ -0.18
VTI1A-203ENST00000472892 NME6O75414 186 aaPredicted RBP13.91□□□□□ -0.18
VTI1A-203ENST00000472892 ERN1O75460 977 aaKnown RBP13.91□□□□□ -0.18
VTI1A-203ENST00000472892 PROCP04070 461 aa13.91□□□□□ -0.18
VTI1A-203ENST00000472892 MYL2P10916 166 aa13.91□□□□□ -0.18
VTI1A-203ENST00000472892 CTSSP25774 331 aa13.91□□□□□ -0.18
VTI1A-203ENST00000472892 GCKP35557 465 aa13.91□□□□□ -0.18
VTI1A-203ENST00000472892 PNLIPRP2P54317 469 aa13.91□□□□□ -0.18
VTI1A-203ENST00000472892 DNAJB13P59910 316 aa13.91□□□□□ -0.18
VTI1A-203ENST00000472892 C2orf80Q0P641 193 aa13.91□□□□□ -0.18
VTI1A-203ENST00000472892 SNTB1Q13884 538 aaKnown RBP13.91□□□□□ -0.18
VTI1A-203ENST00000472892 EFR3AQ14156 821 aa13.91□□□□□ -0.18
VTI1A-203ENST00000472892 PRSS53Q2L4Q9 553 aa13.91□□□□□ -0.18
VTI1A-203ENST00000472892 ERCC6LQ2NKX8 1250 aa13.91□□□□□ -0.18
VTI1A-203ENST00000472892 SPDYAQ5MJ70 313 aa13.91□□□□□ -0.18
VTI1A-203ENST00000472892 NPSR1Q6W5P4 371 aa13.91□□□□□ -0.18
VTI1A-203ENST00000472892 FAM9CQ8IZT9 166 aa13.91□□□□□ -0.18
VTI1A-203ENST00000472892 OR7G2Q8NG99 324 aa13.91□□□□□ -0.18
VTI1A-203ENST00000472892 LRRC46Q96FV0 321 aa13.91□□□□□ -0.18
VTI1A-203ENST00000472892 UCN2Q96RP3 112 aa13.91□□□□□ -0.18
VTI1A-203ENST00000472892 STMN4Q9H169 189 aaPredicted RBP13.91□□□□□ -0.18
VTI1A-203ENST00000472892 FOLH1BQ9HBA9 442 aa13.91□□□□□ -0.18
VTI1A-203ENST00000472892 TAS2R9Q9NYW1 312 aa13.91□□□□□ -0.18
VTI1A-203ENST00000472892 CRIM1Q9NZV1 1036 aa13.91□□□□□ -0.18
VTI1A-203ENST00000472892 MAPRE3Q9UPY8 281 aa13.91□□□□□ -0.18
VTI1A-203ENST00000472892 MRPS18CQ9Y3D5 142 aaKnown RBP13.91□□□□□ -0.18
VTI1A-203ENST00000472892 A0A087WV62 115 aa13.9□□□□□ -0.18
VTI1A-203ENST00000472892 IL18BPO95998 194 aa13.9□□□□□ -0.18
VTI1A-203ENST00000472892 DNAJA1P31689 397 aaKnown RBP13.9□□□□□ -0.18
VTI1A-203ENST00000472892 CRHR1P34998 444 aa13.9□□□□□ -0.18
VTI1A-203ENST00000472892 OPRM1P35372 400 aa13.9□□□□□ -0.18
VTI1A-203ENST00000472892 SLCO1A2P46721 670 aa13.9□□□□□ -0.18
VTI1A-203ENST00000472892 CCT5P48643 541 aa13.9□□□□□ -0.18
VTI1A-203ENST00000472892 GAS1P54826 345 aa13.9□□□□□ -0.18
VTI1A-203ENST00000472892 GFRA1P56159 465 aa13.9□□□□□ -0.18
VTI1A-203ENST00000472892 ZNF763Q0D2J5 394 aa13.9□□□□□ -0.18
VTI1A-203ENST00000472892 RCAN2Q14206 197 aa13.9□□□□□ -0.18
VTI1A-203ENST00000472892 CCDC153Q494R4 210 aa13.9□□□□□ -0.18
VTI1A-203ENST00000472892 FAM71E1Q6IPT2 247 aa13.9□□□□□ -0.18
VTI1A-203ENST00000472892 ENPP6Q6UWR7 440 aa13.9□□□□□ -0.18
VTI1A-203ENST00000472892 FRMD7Q6ZUT3 714 aa13.9□□□□□ -0.18
VTI1A-203ENST00000472892 LARP4Q71RC2 724 aaKnown RBP eCLIP13.9□□□□□ -0.18
VTI1A-203ENST00000472892 ADGRE4PQ86SQ3 457 aa13.9□□□□□ -0.18
VTI1A-203ENST00000472892 TRIM42Q8IWZ5 723 aa13.9□□□□□ -0.18
VTI1A-203ENST00000472892 OR4N2Q8NGD1 307 aa13.9□□□□□ -0.18
VTI1A-203ENST00000472892 OR14L1PQ8NHC6 308 aa13.9□□□□□ -0.18
VTI1A-203ENST00000472892 FAM76AQ8TAV0 307 aa13.9□□□□□ -0.18
VTI1A-203ENST00000472892 FAM222BQ8WU58 562 aa13.9□□□□□ -0.18
VTI1A-203ENST00000472892 BBS4Q96RK4 519 aa13.9□□□□□ -0.18
VTI1A-203ENST00000472892 DNAJB12Q9NXW2 375 aaKnown RBP13.9□□□□□ -0.18
VTI1A-203ENST00000472892 TAS2R10Q9NYW0 307 aa13.9□□□□□ -0.18
VTI1A-203ENST00000472892 JKAMPQ9P055 326 aa13.9□□□□□ -0.18
VTI1A-203ENST00000472892 GRID1Q9ULK0 1009 aa13.9□□□□□ -0.18
VTI1A-203ENST00000472892 WIF1Q9Y5W5 379 aa13.9□□□□□ -0.18
VTI1A-203ENST00000472892 PLOD2O00469 737 aa13.89□□□□□ -0.19
VTI1A-203ENST00000472892 ZIC3O60481 467 aa13.89□□□□□ -0.19
VTI1A-203ENST00000472892 PLIN3O60664 434 aa13.89□□□□□ -0.19
VTI1A-203ENST00000472892 SLITRK5O94991 958 aa13.89□□□□□ -0.19
VTI1A-203ENST00000472892 SHBGP04278 402 aa13.89□□□□□ -0.19
VTI1A-203ENST00000472892 CYP4B1P13584 511 aa13.89□□□□□ -0.19
VTI1A-203ENST00000472892 SRD5A2P31213 254 aa13.89□□□□□ -0.19
VTI1A-203ENST00000472892 KRT20P35900 424 aa13.89□□□□□ -0.19
VTI1A-203ENST00000472892 PSG6Q00889 435 aa13.89□□□□□ -0.19
VTI1A-203ENST00000472892 DAZAP2Q15038 168 aaPredicted RBP13.89□□□□□ -0.19
VTI1A-203ENST00000472892 IFNEQ86WN2 208 aa13.89□□□□□ -0.19
VTI1A-203ENST00000472892 TDRPQ86YL5 185 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms