RNA–Protein interactions for RNA: ENST00000472679.1

CLK1-209, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 461 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-209ENST00000472679 IMPA2O14732 288 aa4.11□□□□□ -1.75
CLK1-209ENST00000472679 DUSP14O95147 198 aaKnown RBP4.11□□□□□ -1.75
CLK1-209ENST00000472679 SLC2A10O95528 541 aa4.11□□□□□ -1.75
CLK1-209ENST00000472679 GHRP10912 638 aa4.11□□□□□ -1.75
CLK1-209ENST00000472679 HSPA1LP34931 641 aa4.11□□□□□ -1.75
CLK1-209ENST00000472679 MYBPC1Q00872 1141 aa4.11□□□□□ -1.75
CLK1-209ENST00000472679 ACSF3Q4G176 576 aaPredicted RBP4.11□□□□□ -1.75
CLK1-209ENST00000472679 PNCKQ6P2M8 343 aa4.11□□□□□ -1.75
CLK1-209ENST00000472679 FAM159AQ6UWV7 190 aa4.11□□□□□ -1.75
CLK1-209ENST00000472679 GOLGA7Q7Z5G4 137 aa4.11□□□□□ -1.75
CLK1-209ENST00000472679 WDR36Q8NI36 951 aaKnown RBP4.11□□□□□ -1.75
CLK1-209ENST00000472679 TSPAN18Q96SJ8 248 aa4.11□□□□□ -1.75
CLK1-209ENST00000472679 PAXXQ9BUH6 204 aa4.11□□□□□ -1.75
CLK1-209ENST00000472679 NACA2Q9H009 215 aa4.11□□□□□ -1.75
CLK1-209ENST00000472679 ZNF275Q9NSD4 429 aaPredicted RBP4.11□□□□□ -1.75
CLK1-209ENST00000472679 CLIP2Q9UDT6 1046 aa4.11□□□□□ -1.75
CLK1-209ENST00000472679 IL20RAQ9UHF4 553 aa4.11□□□□□ -1.75
CLK1-209ENST00000472679 KIF25-AS1Q9Y6Z4 181 aa4.11□□□□□ -1.75
CLK1-209ENST00000472679 KLF18A0A0U1RQI7 1052 aa4.1□□□□□ -1.75
CLK1-209ENST00000472679 CFAP73A6NFT4 308 aa4.1□□□□□ -1.75
CLK1-209ENST00000472679 GPAA1O43292 621 aa4.1□□□□□ -1.75
CLK1-209ENST00000472679 ALPPP05187 535 aa4.1□□□□□ -1.75
CLK1-209ENST00000472679 CT45A10P0DMU9 189 aa4.1□□□□□ -1.75
CLK1-209ENST00000472679 ALPPL2P10696 532 aa4.1□□□□□ -1.75
CLK1-209ENST00000472679 ALDH3B2P48448 385 aa4.1□□□□□ -1.75
CLK1-209ENST00000472679 ERVPABLB-1P60509 514 aa4.1□□□□□ -1.75
CLK1-209ENST00000472679 NOP14P78316 857 aaKnown RBP4.1□□□□□ -1.75
CLK1-209ENST00000472679 PDK1Q15118 436 aa4.1□□□□□ -1.75
CLK1-209ENST00000472679 PAN3Q58A45 887 aaKnown RBP4.1□□□□□ -1.75
CLK1-209ENST00000472679 LCE3EQ5T5B0 92 aa4.1□□□□□ -1.75
CLK1-209ENST00000472679 FHL5Q5TD97 284 aa4.1□□□□□ -1.75
CLK1-209ENST00000472679 IL23RQ5VWK5 629 aa4.1□□□□□ -1.75
CLK1-209ENST00000472679 TMEM26Q6ZUK4 368 aa4.1□□□□□ -1.75
CLK1-209ENST00000472679 CENPSQ8N2Z9 138 aa4.1□□□□□ -1.75
CLK1-209ENST00000472679 ARFGAP2Q8N6H7 521 aa4.1□□□□□ -1.75
CLK1-209ENST00000472679 ZNF525Q8N782 197 aa4.1□□□□□ -1.75
CLK1-209ENST00000472679 TMEM186Q96B77 213 aa4.1□□□□□ -1.75
CLK1-209ENST00000472679 VSIG2Q96IQ7 327 aa4.1□□□□□ -1.75
CLK1-209ENST00000472679 ABCG8Q9H221 673 aa4.1□□□□□ -1.75
CLK1-209ENST00000472679 DBNDD1Q9H9R9 158 aa4.1□□□□□ -1.75
CLK1-209ENST00000472679 MEPEQ9NQ76 525 aaPredicted RBP4.1□□□□□ -1.75
CLK1-209ENST00000472679 CNOT2Q9NZN8 540 aaKnown RBP4.1□□□□□ -1.75
CLK1-209ENST00000472679 ARHGAP42A6NI28 874 aa4.09□□□□□ -1.75
CLK1-209ENST00000472679 NPIPA2E9PIF3 369 aa4.09□□□□□ -1.75
CLK1-209ENST00000472679 SLC17A2O00624 439 aa4.09□□□□□ -1.75
CLK1-209ENST00000472679 LCMT2O60294 686 aaKnown RBP4.09□□□□□ -1.75
CLK1-209ENST00000472679 VDRP11473 427 aa4.09□□□□□ -1.75
CLK1-209ENST00000472679 FUT7Q11130 342 aa4.09□□□□□ -1.75
CLK1-209ENST00000472679 EIF2B1Q14232 305 aaKnown RBP4.09□□□□□ -1.75
CLK1-209ENST00000472679 PARP6Q2NL67 630 aa4.09□□□□□ -1.75
CLK1-209ENST00000472679 CCDC40Q4G0X9 1142 aa4.09□□□□□ -1.75
CLK1-209ENST00000472679 C2orf66Q6UXQ4 117 aa4.09□□□□□ -1.75
CLK1-209ENST00000472679 MIER3Q7Z3K6 550 aa4.09□□□□□ -1.75
CLK1-209ENST00000472679 CCDC36Q8IYA8 594 aa4.09□□□□□ -1.75
CLK1-209ENST00000472679 NSMCE2Q96MF7 247 aa4.09□□□□□ -1.75
CLK1-209ENST00000472679 CASD1Q96PB1 797 aa4.09□□□□□ -1.75
CLK1-209ENST00000472679 TMEM237Q96Q45 408 aa4.09□□□□□ -1.75
CLK1-209ENST00000472679 HCAR1Q9BXC0 346 aa4.09□□□□□ -1.75
CLK1-209ENST00000472679 DCAF13Q9NV06 445 aaKnown RBP4.09□□□□□ -1.75
CLK1-209ENST00000472679 SLC2A6Q9UGQ3 507 aa4.09□□□□□ -1.75
CLK1-209ENST00000472679 IGKV6D-41A0A0C4DH26 115 aa4.08□□□□□ -1.76
CLK1-209ENST00000472679 PRDX2P32119 198 aa4.08□□□□□ -1.76
CLK1-209ENST00000472679 ATP6V1E1P36543 226 aa4.08□□□□□ -1.76
CLK1-209ENST00000472679 METAP1P53582 386 aa4.08□□□□□ -1.76
CLK1-209ENST00000472679 SRYQ05066 204 aa4.08□□□□□ -1.76
CLK1-209ENST00000472679 WASHC5Q12768 1159 aa4.08□□□□□ -1.76
CLK1-209ENST00000472679 QRICH1Q2TAL8 776 aa4.08□□□□□ -1.76
CLK1-209ENST00000472679 TATDN1Q6P1N9 297 aa4.08□□□□□ -1.76
CLK1-209ENST00000472679 NEK5Q6P3R8 708 aa4.08□□□□□ -1.76
CLK1-209ENST00000472679 HACD2Q6Y1H2 254 aa4.08□□□□□ -1.76
CLK1-209ENST00000472679 BADQ92934 168 aa4.08□□□□□ -1.76
CLK1-209ENST00000472679 OR5M11Q96RB7 305 aa4.08□□□□□ -1.76
CLK1-209ENST00000472679 YTHDF1Q9BYJ9 559 aaKnown RBP4.08□□□□□ -1.76
CLK1-209ENST00000472679 MIEF1Q9NQG6 463 aa4.08□□□□□ -1.76
CLK1-209ENST00000472679 VNN3Q9NY84 501 aa4.08□□□□□ -1.76
CLK1-209ENST00000472679 SPASTQ9UBP0 616 aa4.08□□□□□ -1.76
CLK1-209ENST00000472679 MOSPD1Q9UJG1 213 aa4.08□□□□□ -1.76
CLK1-209ENST00000472679 CCPG1Q9ULG6 757 aa4.08□□□□□ -1.76
CLK1-209ENST00000472679 CLEC4EQ9ULY5 219 aa4.08□□□□□ -1.76
CLK1-209ENST00000472679 BARX2Q9UMQ3 279 aaPredicted RBP4.08□□□□□ -1.76
CLK1-209ENST00000472679 MOKQ9UQ07 419 aa4.08□□□□□ -1.76
CLK1-209ENST00000472679 DHRS7Q9Y394 339 aa4.08□□□□□ -1.76
CLK1-209ENST00000472679 LY6G6DO95868 133 aa4.07□□□□□ -1.76
CLK1-209ENST00000472679 NUMBP49757 651 aa4.07□□□□□ -1.76
CLK1-209ENST00000472679 STK19P49842 368 aaPredicted RBP4.07□□□□□ -1.76
CLK1-209ENST00000472679 STARD6P59095 220 aa4.07□□□□□ -1.76
CLK1-209ENST00000472679 ZP4Q12836 540 aa4.07□□□□□ -1.76
CLK1-209ENST00000472679 IL18R1Q13478 541 aa4.07□□□□□ -1.76
CLK1-209ENST00000472679 ASAH1Q13510 395 aa4.07□□□□□ -1.76
CLK1-209ENST00000472679 BEND6Q5SZJ8 279 aaPredicted RBP4.07□□□□□ -1.76
CLK1-209ENST00000472679 RAB12Q6IQ22 244 aa4.07□□□□□ -1.76
CLK1-209ENST00000472679 ZNF562Q6V9R5 426 aa4.07□□□□□ -1.76
CLK1-209ENST00000472679 PAQR9Q6ZVX9 377 aa4.07□□□□□ -1.76
CLK1-209ENST00000472679 ELMOD2Q8IZ81 293 aa4.07□□□□□ -1.76
CLK1-209ENST00000472679 GPR137CQ8N3F9 429 aa4.07□□□□□ -1.76
CLK1-209ENST00000472679 CCDC26Q8TAB7 109 aa4.07□□□□□ -1.76
CLK1-209ENST00000472679 TFB1MQ8WVM0 346 aaKnown RBP4.07□□□□□ -1.76
CLK1-209ENST00000472679 CARD6Q9BX69 1037 aa4.07□□□□□ -1.76
CLK1-209ENST00000472679 TM2D1Q9BX74 207 aa4.07□□□□□ -1.76
CLK1-209ENST00000472679 BCAP29Q9UHQ4 241 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms