RNA–Protein interactions for RNA: ENST00000472585.1

VCL-204, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-204ENST00000472585 NT5EP21589 574 aa8.4□□□□□ -1.06
VCL-204ENST00000472585 SERPINB1P30740 379 aa8.4□□□□□ -1.06
VCL-204ENST00000472585 FEN1P39748 380 aaKnown RBP8.4□□□□□ -1.06
VCL-204ENST00000472585 EMDP50402 254 aa8.4□□□□□ -1.06
VCL-204ENST00000472585 SLC12A2P55011 1212 aa8.4□□□□□ -1.06
VCL-204ENST00000472585 NRG3P56975 720 aa8.4□□□□□ -1.06
VCL-204ENST00000472585 OCRLQ01968 901 aa8.4□□□□□ -1.06
VCL-204ENST00000472585 GUSBP1Q15486 140 aa8.4□□□□□ -1.06
VCL-204ENST00000472585 LTB4RQ15722 352 aa8.4□□□□□ -1.06
VCL-204ENST00000472585 ETFDHQ16134 617 aa8.4□□□□□ -1.06
VCL-204ENST00000472585 LIPJQ5W064 366 aa8.4□□□□□ -1.06
VCL-204ENST00000472585 CYP20A1Q6UW02 462 aa8.4□□□□□ -1.06
VCL-204ENST00000472585 MYLK4Q86YV6 388 aaPredicted RBP8.4□□□□□ -1.06
VCL-204ENST00000472585 PLCZ1Q86YW0 608 aa8.4□□□□□ -1.06
VCL-204ENST00000472585 CREG2Q8IUH2 290 aa8.4□□□□□ -1.06
VCL-204ENST00000472585 CENPLQ8N0S6 344 aaPredicted RBP8.4□□□□□ -1.06
VCL-204ENST00000472585 L3MBTL4Q8NA19 623 aa8.4□□□□□ -1.06
VCL-204ENST00000472585 OR7G1Q8NGA0 311 aa8.4□□□□□ -1.06
VCL-204ENST00000472585 OR4K14Q8NGD5 310 aa8.4□□□□□ -1.06
VCL-204ENST00000472585 STAG3L4Q8TBR4 150 aa8.4□□□□□ -1.06
VCL-204ENST00000472585 RNF138Q8WVD3 245 aa8.4□□□□□ -1.06
VCL-204ENST00000472585 TSPAN17Q96FV3 270 aa8.4□□□□□ -1.06
VCL-204ENST00000472585 TRMT61AQ96FX7 289 aaKnown RBP8.4□□□□□ -1.06
VCL-204ENST00000472585 PGM2Q96G03 612 aa8.4□□□□□ -1.06
VCL-204ENST00000472585 ZC3HAV1LQ96H79 300 aaKnown RBP8.4□□□□□ -1.06
VCL-204ENST00000472585 GPR78Q96P69 363 aa8.4□□□□□ -1.06
VCL-204ENST00000472585 CPNE1Q99829 537 aa8.4□□□□□ -1.06
VCL-204ENST00000472585 OSBPL11Q9BXB4 747 aa8.4□□□□□ -1.06
VCL-204ENST00000472585 BEX2Q9BXY8 128 aa8.4□□□□□ -1.06
VCL-204ENST00000472585 RTN4RQ9BZR6 473 aa8.4□□□□□ -1.06
VCL-204ENST00000472585 ZNF701Q9NV72 531 aaPredicted RBP8.4□□□□□ -1.06
VCL-204ENST00000472585 PSD3Q9NYI0 1048 aa8.4□□□□□ -1.06
VCL-204ENST00000472585 TAS2R10Q9NYW0 307 aa8.4□□□□□ -1.06
VCL-204ENST00000472585 NUDT4Q9NZJ9 180 aa8.4□□□□□ -1.06
VCL-204ENST00000472585 PLLPQ9Y342 182 aa8.4□□□□□ -1.06
VCL-204ENST00000472585 SNX24Q9Y343 169 aa8.4□□□□□ -1.06
VCL-204ENST00000472585 ANK2Q01484 3957 aa8.39□□□□□ -1.07
VCL-204ENST00000472585 GOLGA6L10A0A0M3HER8 536 aa8.39□□□□□ -1.07
VCL-204ENST00000472585 PRAMEF25A6NGN4 478 aa8.39□□□□□ -1.07
VCL-204ENST00000472585 FOXE1O00358 373 aaPredicted RBP8.39□□□□□ -1.07
VCL-204ENST00000472585 OR7A17O14581 309 aa8.39□□□□□ -1.07
VCL-204ENST00000472585 SIX3O95343 332 aaPredicted RBP8.39□□□□□ -1.07
VCL-204ENST00000472585 RHOXF2BP0C7M4 288 aa8.39□□□□□ -1.07
VCL-204ENST00000472585 CT45A8P0DMV1 189 aa8.39□□□□□ -1.07
VCL-204ENST00000472585 CT45A9P0DMV2 189 aa8.39□□□□□ -1.07
VCL-204ENST00000472585 PORP16435 677 aaPredicted RBP8.39□□□□□ -1.07
VCL-204ENST00000472585 CHMP24386 653 aa8.39□□□□□ -1.07
VCL-204ENST00000472585 PIK3R1P27986 724 aa8.39□□□□□ -1.07
VCL-204ENST00000472585 SRD5A2P31213 254 aa8.39□□□□□ -1.07
VCL-204ENST00000472585 IDUAP35475 653 aa8.39□□□□□ -1.07
VCL-204ENST00000472585 KCNJ5P48544 419 aa8.39□□□□□ -1.07
VCL-204ENST00000472585 TMED10P49755 219 aaKnown RBP8.39□□□□□ -1.07
VCL-204ENST00000472585 SIRPAP78324 504 aa8.39□□□□□ -1.07
VCL-204ENST00000472585 MRPS35P82673 323 aaKnown RBP8.39□□□□□ -1.07
VCL-204ENST00000472585 DR1Q01658 176 aa8.39□□□□□ -1.07
VCL-204ENST00000472585 SNTA1Q13424 505 aa8.39□□□□□ -1.07
VCL-204ENST00000472585 PFKFB4Q16877 469 aa8.39□□□□□ -1.07
VCL-204ENST00000472585 CT45A2Q5DJT8 189 aa8.39□□□□□ -1.07
VCL-204ENST00000472585 OR52E8Q6IFG1 317 aa8.39□□□□□ -1.07
VCL-204ENST00000472585 ENPP6Q6UWR7 440 aa8.39□□□□□ -1.07
VCL-204ENST00000472585 CYS1Q717R9 158 aa8.39□□□□□ -1.07
VCL-204ENST00000472585 GOLGA7Q7Z5G4 137 aa8.39□□□□□ -1.07
VCL-204ENST00000472585 IFNEQ86WN2 208 aa8.39□□□□□ -1.07
VCL-204ENST00000472585 NUDT13Q86X67 352 aa8.39□□□□□ -1.07
VCL-204ENST00000472585 GRAMD2AQ8IUY3 354 aa8.39□□□□□ -1.07
VCL-204ENST00000472585 CNEP1R1Q8N9A8 125 aa8.39□□□□□ -1.07
VCL-204ENST00000472585 OR52B6Q8NGF0 335 aa8.39□□□□□ -1.07
VCL-204ENST00000472585 LILRB1Q8NHL6 650 aaPredicted RBP8.39□□□□□ -1.07
VCL-204ENST00000472585 KCTD4Q8WVF5 259 aa8.39□□□□□ -1.07
VCL-204ENST00000472585 TMBIM1Q969X1 311 aa8.39□□□□□ -1.07
VCL-204ENST00000472585 TM4SF18Q96CE8 201 aa8.39□□□□□ -1.07
VCL-204ENST00000472585 ZNF845Q96IR2 970 aaPredicted RBP8.39□□□□□ -1.07
VCL-204ENST00000472585 LCORQ96JN0 433 aaPredicted RBP8.39□□□□□ -1.07
VCL-204ENST00000472585 ZNF681Q96N22 645 aa8.39□□□□□ -1.07
VCL-204ENST00000472585 SLC39A3Q9BRY0 314 aa8.39□□□□□ -1.07
VCL-204ENST00000472585 MRPL1Q9BYD6 325 aaKnown RBP8.39□□□□□ -1.07
VCL-204ENST00000472585 IPPKQ9H8X2 491 aa8.39□□□□□ -1.07
VCL-204ENST00000472585 ACTR8Q9H981 624 aa8.39□□□□□ -1.07
VCL-204ENST00000472585 LRTM1Q9HBL6 345 aa8.39□□□□□ -1.07
VCL-204ENST00000472585 NSMCE4AQ9NXX6 385 aa8.39□□□□□ -1.07
VCL-204ENST00000472585 KLRF1Q9NZS2 232 aa8.39□□□□□ -1.07
VCL-204ENST00000472585 DLGAP4Q9Y2H0 992 aa8.39□□□□□ -1.07
VCL-204ENST00000472585 GPR55Q9Y2T6 319 aaPredicted RBP8.39□□□□□ -1.07
VCL-204ENST00000472585 MRPS18CQ9Y3D5 142 aaKnown RBP8.39□□□□□ -1.07
VCL-204ENST00000472585 PCDHGA11Q9Y5H2 935 aa8.39□□□□□ -1.07
VCL-204ENST00000472585 PCDHA9Q9Y5H5 950 aa8.39□□□□□ -1.07
VCL-204ENST00000472585 FRG2CA6NGY1 282 aa8.38□□□□□ -1.07
VCL-204ENST00000472585 PPP6CO00743 305 aa8.38□□□□□ -1.07
VCL-204ENST00000472585 TO15178 435 aa8.38□□□□□ -1.07
VCL-204ENST00000472585 TSPAN2O60636 221 aa8.38□□□□□ -1.07
VCL-204ENST00000472585 S100BP04271 92 aaPredicted RBP8.38□□□□□ -1.07
VCL-204ENST00000472585 ATP1B1P05026 303 aa8.38□□□□□ -1.07
VCL-204ENST00000472585 POU2F1P14859 743 aa8.38□□□□□ -1.07
VCL-204ENST00000472585 PCSK2P16519 638 aa8.38□□□□□ -1.07
VCL-204ENST00000472585 DRD5P21918 477 aa8.38□□□□□ -1.07
VCL-204ENST00000472585 GP5P40197 560 aa8.38□□□□□ -1.07
VCL-204ENST00000472585 PPICP45877 212 aa8.38□□□□□ -1.07
VCL-204ENST00000472585 CLDN20P56880 219 aa8.38□□□□□ -1.07
VCL-204ENST00000472585 CORO7P57737 925 aa8.38□□□□□ -1.07
VCL-204ENST00000472585 RPP38P78345 283 aaKnown RBP8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms