RNA–Protein interactions for RNA: ENST00000471037.1

SF3A1-206, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 3

Gene SF3A1, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-206ENST00000471037 RTL6Q6ICC9 239 aa8.36□□□□□ -1.07
SF3A1-206ENST00000471037 MRM1Q6IN84 353 aaKnown RBP8.36□□□□□ -1.07
SF3A1-206ENST00000471037 C6orf89Q6UWU4 347 aa8.36□□□□□ -1.07
SF3A1-206ENST00000471037 IL20RBQ6UXL0 311 aa8.36□□□□□ -1.07
SF3A1-206ENST00000471037 TGIF2LYQ8IUE0 185 aa8.36□□□□□ -1.07
SF3A1-206ENST00000471037 ZNF595Q8IYB9 648 aa8.36□□□□□ -1.07
SF3A1-206ENST00000471037 TMEM132CQ8N3T6 1108 aa8.36□□□□□ -1.07
SF3A1-206ENST00000471037 FAM109AQ8N4B1 249 aa8.36□□□□□ -1.07
SF3A1-206ENST00000471037 GOLM1Q8NBJ4 401 aa8.36□□□□□ -1.07
SF3A1-206ENST00000471037 TMEM52Q8NDY8 209 aa8.36□□□□□ -1.07
SF3A1-206ENST00000471037 CHDHQ8NE62 594 aaPredicted RBP8.36□□□□□ -1.07
SF3A1-206ENST00000471037 OR8K3Q8NH51 312 aa8.36□□□□□ -1.07
SF3A1-206ENST00000471037 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.36□□□□□ -1.07
SF3A1-206ENST00000471037 C16orf78Q8WTQ4 265 aa8.36□□□□□ -1.07
SF3A1-206ENST00000471037 TSPEARQ8WU66 669 aa8.36□□□□□ -1.07
SF3A1-206ENST00000471037 ASB15Q8WXK1 588 aa8.36□□□□□ -1.07
SF3A1-206ENST00000471037 NRGNQ92686 78 aa8.36□□□□□ -1.07
SF3A1-206ENST00000471037 CMTM5Q96DZ9 223 aa8.36□□□□□ -1.07
SF3A1-206ENST00000471037 TSSK3Q96PN8 268 aa8.36□□□□□ -1.07
SF3A1-206ENST00000471037 FAM173AQ9BQD7 235 aa8.36□□□□□ -1.07
SF3A1-206ENST00000471037 FAIM2Q9BWQ8 316 aa8.36□□□□□ -1.07
SF3A1-206ENST00000471037 SORBS1Q9BX66 1292 aaKnown RBP8.36□□□□□ -1.07
SF3A1-206ENST00000471037 LYRM4Q9HD34 91 aa8.36□□□□□ -1.07
SF3A1-206ENST00000471037 MS4A12Q9NXJ0 267 aa8.36□□□□□ -1.07
SF3A1-206ENST00000471037 ARMCX1Q9P291 453 aa8.36□□□□□ -1.07
SF3A1-206ENST00000471037 PHF11Q9UIL8 331 aa8.36□□□□□ -1.07
SF3A1-206ENST00000471037 MRPS33Q9Y291 106 aaKnown RBP8.36□□□□□ -1.07
SF3A1-206ENST00000471037 LIPGQ9Y5X9 500 aa8.36□□□□□ -1.07
SF3A1-206ENST00000471037 INTS1Q8N201 2190 aaKnown RBP8.36□□□□□ -1.07
SF3A1-206ENST00000471037 ZNF469Q96JG9 3925 aaPredicted RBP8.35□□□□□ -1.07
SF3A1-206ENST00000471037 A0A0G2JMM0 328 aa8.35□□□□□ -1.07
SF3A1-206ENST00000471037 A0A0G2JNJ9 132 aa8.35□□□□□ -1.07
SF3A1-206ENST00000471037 A0A1W2PPB8 328 aa8.35□□□□□ -1.07
SF3A1-206ENST00000471037 A0A1W2PRS3 328 aa8.35□□□□□ -1.07
SF3A1-206ENST00000471037 FAM234BA2RU67 622 aa8.35□□□□□ -1.07
SF3A1-206ENST00000471037 FAM166BA8MTA8 275 aa8.35□□□□□ -1.07
SF3A1-206ENST00000471037 KIR3DP1A8MWS1 328 aa8.35□□□□□ -1.07
SF3A1-206ENST00000471037 CYR61O00622 381 aa8.35□□□□□ -1.07
SF3A1-206ENST00000471037 AQP7O14520 342 aa8.35□□□□□ -1.07
SF3A1-206ENST00000471037 TMPRSS11DO60235 418 aa8.35□□□□□ -1.07
SF3A1-206ENST00000471037 SUSD5O60279 629 aa8.35□□□□□ -1.07
SF3A1-206ENST00000471037 WDR1O75083 606 aa8.35□□□□□ -1.07
SF3A1-206ENST00000471037 CTAG2O75638 210 aa8.35□□□□□ -1.07
SF3A1-206ENST00000471037 GBAP04062 536 aa8.35□□□□□ -1.07
SF3A1-206ENST00000471037 GLI4P10075 376 aa8.35□□□□□ -1.07
SF3A1-206ENST00000471037 DRD2P14416 443 aa8.35□□□□□ -1.07
SF3A1-206ENST00000471037 HOXB4P17483 251 aaPredicted RBP8.35□□□□□ -1.07
SF3A1-206ENST00000471037 CNR1P21554 472 aa8.35□□□□□ -1.07
SF3A1-206ENST00000471037 PEX19P40855 299 aa8.35□□□□□ -1.07
SF3A1-206ENST00000471037 MAGEA5P43359 124 aa8.35□□□□□ -1.07
SF3A1-206ENST00000471037 POLR2JP52435 117 aaKnown RBP8.35□□□□□ -1.07
SF3A1-206ENST00000471037 DLX5P56178 289 aa8.35□□□□□ -1.07
SF3A1-206ENST00000471037 UFM1P61960 85 aa8.35□□□□□ -1.07
SF3A1-206ENST00000471037 FOXO1Q12778 655 aa8.35□□□□□ -1.07
SF3A1-206ENST00000471037 SLC13A2Q13183 592 aa8.35□□□□□ -1.07
SF3A1-206ENST00000471037 SLAMF1Q13291 335 aa8.35□□□□□ -1.07
SF3A1-206ENST00000471037 RCAN2Q14206 197 aa8.35□□□□□ -1.07
SF3A1-206ENST00000471037 HEPACAMQ14CZ8 416 aa8.35□□□□□ -1.07
SF3A1-206ENST00000471037 SLC25A35Q3KQZ1 300 aa8.35□□□□□ -1.07
SF3A1-206ENST00000471037 AGKQ53H12 422 aa8.35□□□□□ -1.07
SF3A1-206ENST00000471037 FAM71E1Q6IPT2 247 aa8.35□□□□□ -1.07
SF3A1-206ENST00000471037 HSDL2Q6YN16 418 aa8.35□□□□□ -1.07
SF3A1-206ENST00000471037 C16orf47Q6ZP98 133 aaPredicted RBP8.35□□□□□ -1.07
SF3A1-206ENST00000471037 RTL4Q6ZR62 310 aa8.35□□□□□ -1.07
SF3A1-206ENST00000471037 TRILQ7L0X0 811 aa8.35□□□□□ -1.07
SF3A1-206ENST00000471037 R3HCC1LQ7Z5L2 792 aaKnown RBP8.35□□□□□ -1.07
SF3A1-206ENST00000471037 GPR180Q86V85 440 aa8.35□□□□□ -1.07
SF3A1-206ENST00000471037 RIMKLAQ8IXN7 391 aa8.35□□□□□ -1.07
SF3A1-206ENST00000471037 TMEM251Q8N6I4 163 aa8.35□□□□□ -1.07
SF3A1-206ENST00000471037 MORN4Q8NDC4 146 aa8.35□□□□□ -1.07
SF3A1-206ENST00000471037 OR5M9Q8NGP3 310 aa8.35□□□□□ -1.07
SF3A1-206ENST00000471037 OR14A16Q8NHC5 309 aa8.35□□□□□ -1.07
SF3A1-206ENST00000471037 CLHC1Q8NHS4 586 aa8.35□□□□□ -1.07
SF3A1-206ENST00000471037 CDC26Q8NHZ8 85 aa8.35□□□□□ -1.07
SF3A1-206ENST00000471037 DAZLQ92904 295 aaKnown RBP8.35□□□□□ -1.07
SF3A1-206ENST00000471037 TESCQ96BS2 214 aa8.35□□□□□ -1.07
SF3A1-206ENST00000471037 TM4SF18Q96CE8 201 aa8.35□□□□□ -1.07
SF3A1-206ENST00000471037 MTERF3Q96E29 417 aa8.35□□□□□ -1.07
SF3A1-206ENST00000471037 ZNF764Q96H86 408 aaPredicted RBP8.35□□□□□ -1.07
SF3A1-206ENST00000471037 SGCZQ96LD1 299 aa8.35□□□□□ -1.07
SF3A1-206ENST00000471037 PRPF18Q99633 342 aaKnown RBP8.35□□□□□ -1.07
SF3A1-206ENST00000471037 IL1RL2Q9HB29 575 aa8.35□□□□□ -1.07
SF3A1-206ENST00000471037 DNAJB12Q9NXW2 375 aaKnown RBP8.35□□□□□ -1.07
SF3A1-206ENST00000471037 CCDC167Q9P0B6 97 aa8.35□□□□□ -1.07
SF3A1-206ENST00000471037 Q9UFV3 132 aa8.35□□□□□ -1.07
SF3A1-206ENST00000471037 BAIAP2L1Q9UHR4 511 aa8.35□□□□□ -1.07
SF3A1-206ENST00000471037 DAPP1Q9UN19 280 aa8.35□□□□□ -1.07
SF3A1-206ENST00000471037 CLCA3PQ9Y6N3 262 aa8.35□□□□□ -1.07
SF3A1-206ENST00000471037 SPACA6W5XKT8 324 aa8.35□□□□□ -1.07
SF3A1-206ENST00000471037 NUP214P35658 2090 aaPredicted RBP8.34□□□□□ -1.07
SF3A1-206ENST00000471037 ZNF407Q9C0G0 2248 aa8.34□□□□□ -1.07
SF3A1-206ENST00000471037 BBIP1A8MTZ0 92 aa8.34□□□□□ -1.07
SF3A1-206ENST00000471037 FAM47E-STBD1D6RA91 191 aa8.34□□□□□ -1.07
SF3A1-206ENST00000471037 WWP2O00308 870 aa8.34□□□□□ -1.07
SF3A1-206ENST00000471037 NR5A2O00482 541 aa8.34□□□□□ -1.07
SF3A1-206ENST00000471037 SCAMP2O15127 329 aaKnown RBP8.34□□□□□ -1.07
SF3A1-206ENST00000471037 HCN1O60741 890 aa8.34□□□□□ -1.07
SF3A1-206ENST00000471037 TBX19O60806 448 aa8.34□□□□□ -1.07
SF3A1-206ENST00000471037 CTNSO60931 367 aa8.34□□□□□ -1.07
SF3A1-206ENST00000471037 UBOX5O94941 541 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms