RNA–Protein interactions for RNA: ENST00000470621.1

SSB-209, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 440 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-209ENST00000470621 PDFQ9HBH1 243 aa3.81□□□□□ -1.8
SSB-209ENST00000470621 MEPEQ9NQ76 525 aaPredicted RBP3.81□□□□□ -1.8
SSB-209ENST00000470621 KLRF1Q9NZS2 232 aa3.81□□□□□ -1.8
SSB-209ENST00000470621 MBD2Q9UBB5 411 aa3.81□□□□□ -1.8
SSB-209ENST00000470621 PLEKHA6Q9Y2H5 1048 aa3.81□□□□□ -1.8
SSB-209ENST00000470621 LRRK1Q38SD2 2015 aa3.8□□□□□ -1.8
SSB-209ENST00000470621 ATRXP46100 2492 aa3.8□□□□□ -1.8
SSB-209ENST00000470621 RAI1Q7Z5J4 1906 aaPredicted RBP3.8□□□□□ -1.8
SSB-209ENST00000470621 ZFP92A6NM28 416 aa3.8□□□□□ -1.8
SSB-209ENST00000470621 NUDT21O43809 227 aaKnown RBP3.8□□□□□ -1.8
SSB-209ENST00000470621 KERAO60938 352 aa3.8□□□□□ -1.8
SSB-209ENST00000470621 PNPP00491 289 aa3.8□□□□□ -1.8
SSB-209ENST00000470621 GSTA1P08263 222 aa3.8□□□□□ -1.8
SSB-209ENST00000470621 PTBP1P26599 531 aaKnown RBP eCLIP3.8□□□□□ -1.8
SSB-209ENST00000470621 PRKAR2BP31323 418 aa3.8□□□□□ -1.8
SSB-209ENST00000470621 RGRP47804 291 aa3.8□□□□□ -1.8
SSB-209ENST00000470621 CD47Q08722 323 aa3.8□□□□□ -1.8
SSB-209ENST00000470621 BNIP1Q12981 228 aa3.8□□□□□ -1.8
SSB-209ENST00000470621 AGKQ53H12 422 aa3.8□□□□□ -1.8
SSB-209ENST00000470621 HERC4Q5GLZ8 1057 aaPredicted RBP3.8□□□□□ -1.8
SSB-209ENST00000470621 RANBP3LQ86VV4 465 aaPredicted RBP3.8□□□□□ -1.8
SSB-209ENST00000470621 CEND1Q8N111 149 aa3.8□□□□□ -1.8
SSB-209ENST00000470621 LRRC17Q8N6Y2 441 aa3.8□□□□□ -1.8
SSB-209ENST00000470621 OR52E1Q8NGJ3 308 aa3.8□□□□□ -1.8
SSB-209ENST00000470621 CCDC26Q8TAB7 109 aa3.8□□□□□ -1.8
SSB-209ENST00000470621 EXOC6Q8TAG9 804 aa3.8□□□□□ -1.8
SSB-209ENST00000470621 CCDC51Q96ER9 411 aa3.8□□□□□ -1.8
SSB-209ENST00000470621 COQ7Q99807 217 aa3.8□□□□□ -1.8
SSB-209ENST00000470621 ACAT2Q9BWD1 397 aa3.8□□□□□ -1.8
SSB-209ENST00000470621 FAM124BQ9H5Z6 455 aaPredicted RBP3.8□□□□□ -1.8
SSB-209ENST00000470621 FAM114A2Q9NRY5 505 aa3.8□□□□□ -1.8
SSB-209ENST00000470621 EPOPA6NHQ4 379 aa3.79□□□□□ -1.8
SSB-209ENST00000470621 CDX4O14627 284 aaPredicted RBP3.79□□□□□ -1.8
SSB-209ENST00000470621 TOXO94900 526 aa3.79□□□□□ -1.8
SSB-209ENST00000470621 IGHV1-2P23083 117 aa3.79□□□□□ -1.8
SSB-209ENST00000470621 ACVR1BP36896 505 aa3.79□□□□□ -1.8
SSB-209ENST00000470621 EIF2B1Q14232 305 aaKnown RBP3.79□□□□□ -1.8
SSB-209ENST00000470621 CARTPTQ16568 116 aa3.79□□□□□ -1.8
SSB-209ENST00000470621 GPBP1Q86WP2 473 aa3.79□□□□□ -1.8
SSB-209ENST00000470621 APOBEC3FQ8IUX4 373 aaKnown RBP3.79□□□□□ -1.8
SSB-209ENST00000470621 PRR22Q8IZ63 422 aa3.79□□□□□ -1.8
SSB-209ENST00000470621 ZNF713Q8N859 430 aaPredicted RBP3.79□□□□□ -1.8
SSB-209ENST00000470621 URGCPQ8TCY9 931 aa3.79□□□□□ -1.8
SSB-209ENST00000470621 EEF2KMTQ96G04 330 aa3.79□□□□□ -1.8
SSB-209ENST00000470621 ELOVL4Q9GZR5 314 aa3.79□□□□□ -1.8
SSB-209ENST00000470621 KLHL21Q9UJP4 597 aa3.79□□□□□ -1.8
SSB-209ENST00000470621 ABCG2Q9UNQ0 655 aa3.79□□□□□ -1.8
SSB-209ENST00000470621 COL16A1Q07092 1604 aaPredicted RBP3.79□□□□□ -1.8
SSB-209ENST00000470621 TRBV2A0A0J9YWF9 115 aa3.78□□□□□ -1.8
SSB-209ENST00000470621 FAM220BPB1ANY3 271 aa3.78□□□□□ -1.8
SSB-209ENST00000470621 DDX39AO00148 427 aaKnown RBP3.78□□□□□ -1.8
SSB-209ENST00000470621 BUB1O43683 1085 aa3.78□□□□□ -1.8
SSB-209ENST00000470621 KRT6AP02538 564 aa3.78□□□□□ -1.8
SSB-209ENST00000470621 KRT6BP04259 564 aa3.78□□□□□ -1.8
SSB-209ENST00000470621 DRD3P35462 400 aa3.78□□□□□ -1.8
SSB-209ENST00000470621 KRT6CP48668 564 aa3.78□□□□□ -1.8
SSB-209ENST00000470621 YBEYP58557 167 aaPredicted RBP3.78□□□□□ -1.8
SSB-209ENST00000470621 SSTP61278 116 aa3.78□□□□□ -1.8
SSB-209ENST00000470621 NOP14P78316 857 aaKnown RBP3.78□□□□□ -1.8
SSB-209ENST00000470621 PRKCEQ02156 737 aa3.78□□□□□ -1.8
SSB-209ENST00000470621 IL18R1Q13478 541 aa3.78□□□□□ -1.8
SSB-209ENST00000470621 GLYR1Q49A26 553 aaPredicted RBP3.78□□□□□ -1.8
SSB-209ENST00000470621 SLC10A5Q5PT55 438 aa3.78□□□□□ -1.8
SSB-209ENST00000470621 LGSNQ5TDP6 509 aa3.78□□□□□ -1.8
SSB-209ENST00000470621 ERICH1Q86X53 443 aa3.78□□□□□ -1.8
SSB-209ENST00000470621 LEMD2Q8NC56 503 aa3.78□□□□□ -1.8
SSB-209ENST00000470621 CCNYQ8ND76 341 aa3.78□□□□□ -1.8
SSB-209ENST00000470621 NEK11Q8NG66 645 aa3.78□□□□□ -1.8
SSB-209ENST00000470621 TFB1MQ8WVM0 346 aaKnown RBP3.78□□□□□ -1.8
SSB-209ENST00000470621 ATP6V0BQ99437 205 aa3.78□□□□□ -1.8
SSB-209ENST00000470621 KIR2DL4Q99706 377 aa3.78□□□□□ -1.8
SSB-209ENST00000470621 OPN3Q9H1Y3 402 aaPredicted RBP3.78□□□□□ -1.8
SSB-209ENST00000470621 DCAF13Q9NV06 445 aaKnown RBP3.78□□□□□ -1.8
SSB-209ENST00000470621 TMEM9Q9P0T7 183 aa3.78□□□□□ -1.8
SSB-209ENST00000470621 TRIM10Q9UDY6 481 aa3.78□□□□□ -1.8
SSB-209ENST00000470621 FETUBQ9UGM5 382 aa3.78□□□□□ -1.8
SSB-209ENST00000470621 FZR1Q9UM11 496 aa3.78□□□□□ -1.8
SSB-209ENST00000470621 FKBP7Q9Y680 259 aa3.78□□□□□ -1.8
SSB-209ENST00000470621 LATO43561 262 aa3.77□□□□□ -1.81
SSB-209ENST00000470621 NOL4O94818 638 aa3.77□□□□□ -1.81
SSB-209ENST00000470621 LYPD3O95274 346 aa3.77□□□□□ -1.81
SSB-209ENST00000470621 ATP6V1B1P15313 513 aa3.77□□□□□ -1.81
SSB-209ENST00000470621 OAS2P29728 719 aaKnown RBP3.77□□□□□ -1.81
SSB-209ENST00000470621 MAGEA4P43358 317 aa3.77□□□□□ -1.81
SSB-209ENST00000470621 METAP1P53582 386 aa3.77□□□□□ -1.81
SSB-209ENST00000470621 STX17P56962 302 aa3.77□□□□□ -1.81
SSB-209ENST00000470621 NME3Q13232 169 aa3.77□□□□□ -1.81
SSB-209ENST00000470621 RFTN1Q14699 578 aaPredicted RBP3.77□□□□□ -1.81
SSB-209ENST00000470621 DCAF4L1Q3SXM0 396 aa3.77□□□□□ -1.81
SSB-209ENST00000470621 KRTAP13-3Q3SY46 172 aa3.77□□□□□ -1.81
SSB-209ENST00000470621 ACSF3Q4G176 576 aaPredicted RBP3.77□□□□□ -1.81
SSB-209ENST00000470621 UFSP1Q6NVU6 142 aa3.77□□□□□ -1.81
SSB-209ENST00000470621 CENPSQ8N2Z9 138 aa3.77□□□□□ -1.81
SSB-209ENST00000470621 CCDC43Q96MW1 224 aaKnown RBP3.77□□□□□ -1.81
SSB-209ENST00000470621 TSPAN18Q96SJ8 248 aa3.77□□□□□ -1.81
SSB-209ENST00000470621 NDUFAF3Q9BU61 184 aa3.77□□□□□ -1.81
SSB-209ENST00000470621 BARX2Q9UMQ3 279 aaPredicted RBP3.77□□□□□ -1.81
SSB-209ENST00000470621 CA5BQ9Y2D0 317 aa3.77□□□□□ -1.81
SSB-209ENST00000470621 IGLV8-61A0A075B6I0 122 aa3.76□□□□□ -1.81
SSB-209ENST00000470621 IMPA2O14732 288 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 138.3 ms