RNA–Protein interactions for RNA: ENST00000470091.1

LINC00173-201, long intergenic non-protein coding RNA 173, humanhuman

TSL 1 (best) BASIC

Gene LINC00173, Length 435 nt, Biotype lincRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173-201ENST00000470091 OTOGQ6ZRI0 2925 aa12.65□□□□□ -0.39
LINC00173-201ENST00000470091 A0A1W2PS29 197 aa12.64□□□□□ -0.39
LINC00173-201ENST00000470091 OR5H15A6NDH6 313 aa12.64□□□□□ -0.39
LINC00173-201ENST00000470091 DNAJA2O60884 412 aa12.64□□□□□ -0.39
LINC00173-201ENST00000470091 ERAL1O75616 437 aaKnown RBP12.64□□□□□ -0.39
LINC00173-201ENST00000470091 CRYABP02511 175 aaKnown RBP12.64□□□□□ -0.39
LINC00173-201ENST00000470091 HSD17B1P14061 328 aa12.64□□□□□ -0.39
LINC00173-201ENST00000470091 GRNP28799 593 aaKnown RBP12.64□□□□□ -0.39
LINC00173-201ENST00000470091 NTSP30990 170 aa12.64□□□□□ -0.39
LINC00173-201ENST00000470091 XCR1P46094 333 aa12.64□□□□□ -0.39
LINC00173-201ENST00000470091 AP2B1P63010 937 aa12.64□□□□□ -0.39
LINC00173-201ENST00000470091 MS4A2Q01362 244 aa12.64□□□□□ -0.39
LINC00173-201ENST00000470091 DUSP2Q05923 314 aa12.64□□□□□ -0.39
LINC00173-201ENST00000470091 HSPB3Q12988 150 aa12.64□□□□□ -0.39
LINC00173-201ENST00000470091 FLOT2Q14254 428 aa12.64□□□□□ -0.39
LINC00173-201ENST00000470091 ZNF750Q32MQ0 723 aa12.64□□□□□ -0.39
LINC00173-201ENST00000470091 GLIPR1L2Q4G1C9 344 aa12.64□□□□□ -0.39
LINC00173-201ENST00000470091 OR52E8Q6IFG1 317 aa12.64□□□□□ -0.39
LINC00173-201ENST00000470091 ZNF551Q7Z340 670 aaPredicted RBP12.64□□□□□ -0.39
LINC00173-201ENST00000470091 MCEMP1Q8IX19 187 aa12.64□□□□□ -0.39
LINC00173-201ENST00000470091 HIPK4Q8NE63 616 aa12.64□□□□□ -0.39
LINC00173-201ENST00000470091 GOT1L1Q8NHS2 421 aaPredicted RBP12.64□□□□□ -0.39
LINC00173-201ENST00000470091 PNPT1Q8TCS8 783 aaKnown RBP12.64□□□□□ -0.39
LINC00173-201ENST00000470091 OR5P2Q8WZ92 322 aa12.64□□□□□ -0.39
LINC00173-201ENST00000470091 BBS4Q96RK4 519 aa12.64□□□□□ -0.39
LINC00173-201ENST00000470091 THUMPD3Q9BV44 507 aaKnown RBP12.64□□□□□ -0.39
LINC00173-201ENST00000470091 PCDHAC1Q9H158 963 aa12.64□□□□□ -0.39
LINC00173-201ENST00000470091 ALG2Q9H553 416 aa12.64□□□□□ -0.39
LINC00173-201ENST00000470091 SLC35C2Q9NQQ7 365 aa12.64□□□□□ -0.39
LINC00173-201ENST00000470091 KLHL1Q9NR64 748 aa12.64□□□□□ -0.39
LINC00173-201ENST00000470091 ANKRD10Q9NXR5 420 aa12.64□□□□□ -0.39
LINC00173-201ENST00000470091 TAS2R7Q9NYW3 318 aa12.64□□□□□ -0.39
LINC00173-201ENST00000470091 ABI3Q9P2A4 366 aa12.64□□□□□ -0.39
LINC00173-201ENST00000470091 PCDHGB4Q9UN71 923 aa12.64□□□□□ -0.39
LINC00173-201ENST00000470091 FBN2P35556 2912 aa12.64□□□□□ -0.39
LINC00173-201ENST00000470091 SCN2AQ99250 2005 aa12.63□□□□□ -0.39
LINC00173-201ENST00000470091 FAM227AF5H4B4 570 aa12.63□□□□□ -0.39
LINC00173-201ENST00000470091 H0YIG0 161 aa12.63□□□□□ -0.39
LINC00173-201ENST00000470091 ACOT8O14734 319 aa12.63□□□□□ -0.39
LINC00173-201ENST00000470091 MGRN1O60291 552 aa12.63□□□□□ -0.39
LINC00173-201ENST00000470091 NSA2O95478 260 aaKnown RBP12.63□□□□□ -0.39
LINC00173-201ENST00000470091 ZCCHC18P0CG32 403 aa12.63□□□□□ -0.39
LINC00173-201ENST00000470091 ATP6V1B2P21281 511 aa12.63□□□□□ -0.39
LINC00173-201ENST00000470091 PTGER1P34995 402 aa12.63□□□□□ -0.39
LINC00173-201ENST00000470091 FRKP42685 505 aaPredicted RBP12.63□□□□□ -0.39
LINC00173-201ENST00000470091 CDK9P50750 372 aaKnown RBP12.63□□□□□ -0.39
LINC00173-201ENST00000470091 MANFP55145 182 aaKnown RBP12.63□□□□□ -0.39
LINC00173-201ENST00000470091 RAB38P57729 211 aa12.63□□□□□ -0.39
LINC00173-201ENST00000470091 OR4D2P58180 307 aa12.63□□□□□ -0.39
LINC00173-201ENST00000470091 ACTR3P61158 418 aa12.63□□□□□ -0.39
LINC00173-201ENST00000470091 BNIP2Q12982 314 aa12.63□□□□□ -0.39
LINC00173-201ENST00000470091 INAQ16352 499 aa12.63□□□□□ -0.39
LINC00173-201ENST00000470091 SPATS1Q496A3 300 aa12.63□□□□□ -0.39
LINC00173-201ENST00000470091 ZNF766Q5HY98 468 aa12.63□□□□□ -0.39
LINC00173-201ENST00000470091 ACER2Q5QJU3 275 aa12.63□□□□□ -0.39
LINC00173-201ENST00000470091 ANKRD37Q7Z713 158 aa12.63□□□□□ -0.39
LINC00173-201ENST00000470091 MRGPRGQ86SM5 289 aa12.63□□□□□ -0.39
LINC00173-201ENST00000470091 BEST3Q8N1M1 668 aa12.63□□□□□ -0.39
LINC00173-201ENST00000470091 C10orf111Q8N326 155 aa12.63□□□□□ -0.39
LINC00173-201ENST00000470091 NATD1Q8N6N6 113 aa12.63□□□□□ -0.39
LINC00173-201ENST00000470091 TMEM52Q8NDY8 209 aa12.63□□□□□ -0.39
LINC00173-201ENST00000470091 BHLHE22Q8NFJ8 381 aaPredicted RBP12.63□□□□□ -0.39
LINC00173-201ENST00000470091 OR5AK3PQ8NH89 298 aa12.63□□□□□ -0.39
LINC00173-201ENST00000470091 ITLN2Q8WWU7 325 aaPredicted RBP12.63□□□□□ -0.39
LINC00173-201ENST00000470091 ASB9Q96DX5 294 aa12.63□□□□□ -0.39
LINC00173-201ENST00000470091 ZBED6CLQ96FA7 236 aaPredicted RBP12.63□□□□□ -0.39
LINC00173-201ENST00000470091 PHF12Q96QT6 1004 aa12.63□□□□□ -0.39
LINC00173-201ENST00000470091 SH3GL1Q99961 368 aa12.63□□□□□ -0.39
LINC00173-201ENST00000470091 ECSITQ9BQ95 431 aa12.63□□□□□ -0.39
LINC00173-201ENST00000470091 SLC35A5Q9BS91 424 aa12.63□□□□□ -0.39
LINC00173-201ENST00000470091 NPLQ9BXD5 320 aaPredicted RBP12.63□□□□□ -0.39
LINC00173-201ENST00000470091 RBCK1Q9BYM8 510 aa12.63□□□□□ -0.39
LINC00173-201ENST00000470091 GLIPR2Q9H4G4 154 aa12.63□□□□□ -0.39
LINC00173-201ENST00000470091 CXorf36Q9H7Y0 433 aa12.63□□□□□ -0.39
LINC00173-201ENST00000470091 ACSS1Q9NUB1 689 aaPredicted RBP12.63□□□□□ -0.39
LINC00173-201ENST00000470091 GIMAP4Q9NUV9 329 aa12.63□□□□□ -0.39
LINC00173-201ENST00000470091 TAS2R9Q9NYW1 312 aa12.63□□□□□ -0.39
LINC00173-201ENST00000470091 C19orf25Q9UFG5 118 aaPredicted RBP12.63□□□□□ -0.39
LINC00173-201ENST00000470091 EGFL7Q9UHF1 273 aa12.63□□□□□ -0.39
LINC00173-201ENST00000470091 SPACA6W5XKT8 324 aa12.63□□□□□ -0.39
LINC00173-201ENST00000470091 PKDREJQ9NTG1 2253 aa12.63□□□□□ -0.39
LINC00173-201ENST00000470091 RNF103-CHMP3A0A140T963 221 aa12.62□□□□□ -0.39
LINC00173-201ENST00000470091 MYO1GB0I1T2 1018 aa12.62□□□□□ -0.39
LINC00173-201ENST00000470091 FAM220BPB1ANY3 271 aa12.62□□□□□ -0.39
LINC00173-201ENST00000470091 CLIC1O00299 241 aa12.62□□□□□ -0.39
LINC00173-201ENST00000470091 CHST10O43529 356 aa12.62□□□□□ -0.39
LINC00173-201ENST00000470091 CDC123O75794 336 aaPredicted RBP12.62□□□□□ -0.39
LINC00173-201ENST00000470091 BCAS2O75934 225 aaPredicted RBP12.62□□□□□ -0.39
LINC00173-201ENST00000470091 KRT36O76013 467 aa12.62□□□□□ -0.39
LINC00173-201ENST00000470091 ATP6V1G2O95670 118 aa12.62□□□□□ -0.39
LINC00173-201ENST00000470091 TLX1P31314 330 aaPredicted RBP12.62□□□□□ -0.39
LINC00173-201ENST00000470091 FEN1P39748 380 aaKnown RBP12.62□□□□□ -0.39
LINC00173-201ENST00000470091 NCBP2P52298 156 aaKnown RBP eCLIP12.62□□□□□ -0.39
LINC00173-201ENST00000470091 SKP1P63208 163 aa12.62□□□□□ -0.39
LINC00173-201ENST00000470091 ID2Q02363 134 aa12.62□□□□□ -0.39
LINC00173-201ENST00000470091 TRIM25Q14258 630 aaKnown RBP12.62□□□□□ -0.39
LINC00173-201ENST00000470091 PLAG1Q6DJT9 500 aa12.62□□□□□ -0.39
LINC00173-201ENST00000470091 CALHM3Q86XJ0 350 aa12.62□□□□□ -0.39
LINC00173-201ENST00000470091 OR10A6Q8NH74 314 aa12.62□□□□□ -0.39
LINC00173-201ENST00000470091 ZFP28Q8NHY6 868 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms