RNA–Protein interactions for RNA: ENST00000470076.1

COL7A1-208, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 651 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-208ENST00000470076 TMEM216Q9P0N5 145 aa15.91■□□□□ 0.14
COL7A1-208ENST00000470076 NFU1Q9UMS0 254 aa15.91■□□□□ 0.14
COL7A1-208ENST00000470076 DLX3O60479 287 aa15.9■□□□□ 0.14
COL7A1-208ENST00000470076 CTAGE8P0CG41 777 aa15.9■□□□□ 0.14
COL7A1-208ENST00000470076 TMIGD3P0DMS9 266 aaPredicted RBP15.9■□□□□ 0.14
COL7A1-208ENST00000470076 CHN1P15882 459 aa15.9■□□□□ 0.14
COL7A1-208ENST00000470076 IMPDH1P20839 514 aa15.9■□□□□ 0.14
COL7A1-208ENST00000470076 ATP5F1P24539 256 aaPredicted RBP15.9■□□□□ 0.14
COL7A1-208ENST00000470076 KRT20P35900 424 aa15.9■□□□□ 0.14
COL7A1-208ENST00000470076 AGFG1P52594 562 aaKnown RBP15.9■□□□□ 0.14
COL7A1-208ENST00000470076 DGKQP52824 942 aa15.9■□□□□ 0.14
COL7A1-208ENST00000470076 HMGCS1Q01581 520 aa15.9■□□□□ 0.14
COL7A1-208ENST00000470076 ACSM2AQ08AH3 577 aa15.9■□□□□ 0.14
COL7A1-208ENST00000470076 EFR3AQ14156 821 aa15.9■□□□□ 0.14
COL7A1-208ENST00000470076 ERCC6LQ2NKX8 1250 aa15.9■□□□□ 0.14
COL7A1-208ENST00000470076 FAM219BQ5XKK7 198 aa15.9■□□□□ 0.14
COL7A1-208ENST00000470076 ACSM2BQ68CK6 577 aa15.9■□□□□ 0.14
COL7A1-208ENST00000470076 SCIMPQ6UWF3 145 aa15.9■□□□□ 0.14
COL7A1-208ENST00000470076 IFNEQ86WN2 208 aa15.9■□□□□ 0.14
COL7A1-208ENST00000470076 PLCZ1Q86YW0 608 aa15.9■□□□□ 0.14
COL7A1-208ENST00000470076 TGIF2LYQ8IUE0 185 aa15.9■□□□□ 0.14
COL7A1-208ENST00000470076 SLC22A9Q8IVM8 553 aa15.9■□□□□ 0.14
COL7A1-208ENST00000470076 TRIM42Q8IWZ5 723 aa15.9■□□□□ 0.14
COL7A1-208ENST00000470076 CTAGE4Q8IX94 777 aa15.9■□□□□ 0.14
COL7A1-208ENST00000470076 UCN2Q96RP3 112 aa15.9■□□□□ 0.14
COL7A1-208ENST00000470076 TM9SF2Q99805 663 aa15.9■□□□□ 0.14
COL7A1-208ENST00000470076 TUBA1CQ9BQE3 449 aa15.9■□□□□ 0.14
COL7A1-208ENST00000470076 ACPTQ9BZG2 426 aa15.9■□□□□ 0.14
COL7A1-208ENST00000470076 SHCBP1LQ9BZQ2 653 aa15.9■□□□□ 0.14
COL7A1-208ENST00000470076 WIF1Q9Y5W5 379 aa15.9■□□□□ 0.14
COL7A1-208ENST00000470076 FLNAP21333 2647 aaKnown RBP15.9■□□□□ 0.14
COL7A1-208ENST00000470076 ZNF469Q96JG9 3925 aaPredicted RBP15.89■□□□□ 0.14
COL7A1-208ENST00000470076 MED12LQ86YW9 2145 aa15.89■□□□□ 0.13
COL7A1-208ENST00000470076 CCDC151A5D8V7 595 aa15.89■□□□□ 0.13
COL7A1-208ENST00000470076 H0Y3Z8 333 aa15.89■□□□□ 0.13
COL7A1-208ENST00000470076 ERN1O75460 977 aaKnown RBP15.89■□□□□ 0.13
COL7A1-208ENST00000470076 GOSR1O95249 250 aa15.89■□□□□ 0.13
COL7A1-208ENST00000470076 ENO1P06733 434 aaKnown RBP15.89■□□□□ 0.13
COL7A1-208ENST00000470076 CT45A8P0DMV1 189 aa15.89■□□□□ 0.13
COL7A1-208ENST00000470076 CT45A9P0DMV2 189 aa15.89■□□□□ 0.13
COL7A1-208ENST00000470076 GCAP28676 217 aa15.89■□□□□ 0.13
COL7A1-208ENST00000470076 SRD5A2P31213 254 aa15.89■□□□□ 0.13
COL7A1-208ENST00000470076 GSTM5P46439 218 aa15.89■□□□□ 0.13
COL7A1-208ENST00000470076 SLCO1A2P46721 670 aa15.89■□□□□ 0.13
COL7A1-208ENST00000470076 PKNOX1P55347 436 aa15.89■□□□□ 0.13
COL7A1-208ENST00000470076 GFRA1P56159 465 aa15.89■□□□□ 0.13
COL7A1-208ENST00000470076 RAE1P78406 368 aaKnown RBP15.89■□□□□ 0.13
COL7A1-208ENST00000470076 LCP2Q13094 533 aa15.89■□□□□ 0.13
COL7A1-208ENST00000470076 CEBPEQ15744 281 aa15.89■□□□□ 0.13
COL7A1-208ENST00000470076 CT45A2Q5DJT8 189 aa15.89■□□□□ 0.13
COL7A1-208ENST00000470076 FBXW10Q5XX13 1052 aa15.89■□□□□ 0.13
COL7A1-208ENST00000470076 GALNT18Q6P9A2 607 aa15.89■□□□□ 0.13
COL7A1-208ENST00000470076 AAGABQ6PD74 315 aa15.89■□□□□ 0.13
COL7A1-208ENST00000470076 ADGRE4PQ86SQ3 457 aa15.89■□□□□ 0.13
COL7A1-208ENST00000470076 OR9A2Q8NGT5 310 aa15.89■□□□□ 0.13
COL7A1-208ENST00000470076 RDH11Q8TC12 318 aa15.89■□□□□ 0.13
COL7A1-208ENST00000470076 C16orf78Q8WTQ4 265 aa15.89■□□□□ 0.13
COL7A1-208ENST00000470076 ZNF592Q92610 1267 aa15.89■□□□□ 0.13
COL7A1-208ENST00000470076 KAT2AQ92830 837 aa15.89■□□□□ 0.13
COL7A1-208ENST00000470076 WNT2BQ93097 391 aa15.89■□□□□ 0.13
COL7A1-208ENST00000470076 EXOSC8Q96B26 276 aaKnown RBP15.89■□□□□ 0.13
COL7A1-208ENST00000470076 VSTM2LQ96N03 204 aa15.89■□□□□ 0.13
COL7A1-208ENST00000470076 ALPK1Q96QP1 1244 aa15.89■□□□□ 0.13
COL7A1-208ENST00000470076 ADOQ96SZ5 270 aa15.89■□□□□ 0.13
COL7A1-208ENST00000470076 SFXN3Q9BWM7 321 aa15.89■□□□□ 0.13
COL7A1-208ENST00000470076 ACBD3Q9H3P7 528 aa15.89■□□□□ 0.13
COL7A1-208ENST00000470076 ANKRA2Q9H9E1 313 aa15.89■□□□□ 0.13
COL7A1-208ENST00000470076 SLC35C2Q9NQQ7 365 aa15.89■□□□□ 0.13
COL7A1-208ENST00000470076 TAS2R10Q9NYW0 307 aa15.89■□□□□ 0.13
COL7A1-208ENST00000470076 PLEKHA6Q9Y2H5 1048 aa15.89■□□□□ 0.13
COL7A1-208ENST00000470076 MRPS18CQ9Y3D5 142 aaKnown RBP15.89■□□□□ 0.13
COL7A1-208ENST00000470076 PLOD3O60568 738 aa15.88■□□□□ 0.13
COL7A1-208ENST00000470076 TSPAN2O60636 221 aa15.88■□□□□ 0.13
COL7A1-208ENST00000470076 RCBTB2O95199 551 aa15.88■□□□□ 0.13
COL7A1-208ENST00000470076 CHMP24386 653 aa15.88■□□□□ 0.13
COL7A1-208ENST00000470076 IL12BP29460 328 aa15.88■□□□□ 0.13
COL7A1-208ENST00000470076 TIA1P31483 386 aaKnown RBP eCLIP15.88■□□□□ 0.13
COL7A1-208ENST00000470076 MPIP34949 423 aa15.88■□□□□ 0.13
COL7A1-208ENST00000470076 HTR6P50406 440 aa15.88■□□□□ 0.13
COL7A1-208ENST00000470076 PNLIPRP2P54317 469 aa15.88■□□□□ 0.13
COL7A1-208ENST00000470076 PRKAA2P54646 552 aa15.88■□□□□ 0.13
COL7A1-208ENST00000470076 CORO7P57737 925 aa15.88■□□□□ 0.13
COL7A1-208ENST00000470076 PPP2R2AP63151 447 aa15.88■□□□□ 0.13
COL7A1-208ENST00000470076 MRPS22P82650 360 aaKnown RBP15.88■□□□□ 0.13
COL7A1-208ENST00000470076 SRYQ05066 204 aa15.88■□□□□ 0.13
COL7A1-208ENST00000470076 TRMT10CQ7L0Y3 403 aaKnown RBP15.88■□□□□ 0.13
COL7A1-208ENST00000470076 CAMKMTQ7Z624 323 aa15.88■□□□□ 0.13
COL7A1-208ENST00000470076 CNPY4Q8N129 248 aa15.88■□□□□ 0.13
COL7A1-208ENST00000470076 MBD6Q96DN6 1003 aa15.88■□□□□ 0.13
COL7A1-208ENST00000470076 L3HYPDHQ96EM0 354 aa15.88■□□□□ 0.13
COL7A1-208ENST00000470076 C11orf24Q96F05 449 aaPredicted RBP15.88■□□□□ 0.13
COL7A1-208ENST00000470076 APIPQ96GX9 242 aa15.88■□□□□ 0.13
COL7A1-208ENST00000470076 STMN4Q9H169 189 aaPredicted RBP15.88■□□□□ 0.13
COL7A1-208ENST00000470076 SIRT5Q9NXA8 310 aa15.88■□□□□ 0.13
COL7A1-208ENST00000470076 TAS2R9Q9NYW1 312 aa15.88■□□□□ 0.13
COL7A1-208ENST00000470076 SENP1Q9P0U3 644 aa15.88■□□□□ 0.13
COL7A1-208ENST00000470076 SERTM1A2A2V5 107 aa15.87■□□□□ 0.13
COL7A1-208ENST00000470076 CLCA1A8K7I4 914 aa15.87■□□□□ 0.13
COL7A1-208ENST00000470076 KLK2P20151 261 aa15.87■□□□□ 0.13
COL7A1-208ENST00000470076 LHX2P50458 406 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms