RNA–Protein interactions for RNA: ENST00000469129.1

SMC1A-205, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-205ENST00000469129 TRIM64A6NGJ6 449 aa8.72□□□□□ -1.01
SMC1A-205ENST00000469129 PRAMEF25A6NGN4 478 aa8.72□□□□□ -1.01
SMC1A-205ENST00000469129 FAM227AF5H4B4 570 aa8.72□□□□□ -1.01
SMC1A-205ENST00000469129 DSCR3O14972 297 aa8.72□□□□□ -1.01
SMC1A-205ENST00000469129 B4GAT1O43505 415 aa8.72□□□□□ -1.01
SMC1A-205ENST00000469129 KIAA0513O60268 411 aa8.72□□□□□ -1.01
SMC1A-205ENST00000469129 DNAJB6O75190 326 aa8.72□□□□□ -1.01
SMC1A-205ENST00000469129 STX11O75558 287 aa8.72□□□□□ -1.01
SMC1A-205ENST00000469129 CLIC3O95833 236 aa8.72□□□□□ -1.01
SMC1A-205ENST00000469129 RECKO95980 971 aa8.72□□□□□ -1.01
SMC1A-205ENST00000469129 DBIP07108 87 aaKnown RBP8.72□□□□□ -1.01
SMC1A-205ENST00000469129 SYPP08247 313 aa8.72□□□□□ -1.01
SMC1A-205ENST00000469129 NELFEP18615 380 aaKnown RBP8.72□□□□□ -1.01
SMC1A-205ENST00000469129 FBLP22087 321 aaKnown RBP8.72□□□□□ -1.01
SMC1A-205ENST00000469129 ELAVL4P26378 380 aaKnown RBP8.72□□□□□ -1.01
SMC1A-205ENST00000469129 CD1CP29017 333 aa8.72□□□□□ -1.01
SMC1A-205ENST00000469129 PIGAP37287 484 aa8.72□□□□□ -1.01
SMC1A-205ENST00000469129 PLA2G5P39877 138 aa8.72□□□□□ -1.01
SMC1A-205ENST00000469129 SEPHS1P49903 392 aa8.72□□□□□ -1.01
SMC1A-205ENST00000469129 HLCSP50747 726 aa8.72□□□□□ -1.01
SMC1A-205ENST00000469129 DUSP3P51452 185 aaPredicted RBP8.72□□□□□ -1.01
SMC1A-205ENST00000469129 SH3BGRP55822 239 aaPredicted RBP8.72□□□□□ -1.01
SMC1A-205ENST00000469129 ESRRGP62508 458 aa8.72□□□□□ -1.01
SMC1A-205ENST00000469129 IL5RAQ01344 420 aa8.72□□□□□ -1.01
SMC1A-205ENST00000469129 TEKQ02763 1124 aa8.72□□□□□ -1.01
SMC1A-205ENST00000469129 ACY1Q03154 408 aa8.72□□□□□ -1.01
SMC1A-205ENST00000469129 NPRL3Q12980 569 aa8.72□□□□□ -1.01
SMC1A-205ENST00000469129 SRSF5Q13243 272 aaKnown RBP8.72□□□□□ -1.01
SMC1A-205ENST00000469129 PUM1Q14671 1186 aaKnown RBP eCLIP8.72□□□□□ -1.01
SMC1A-205ENST00000469129 GANABQ14697 944 aaKnown RBP8.72□□□□□ -1.01
SMC1A-205ENST00000469129 LAPTM4AQ15012 233 aa8.72□□□□□ -1.01
SMC1A-205ENST00000469129 DUSP5Q16690 384 aa8.72□□□□□ -1.01
SMC1A-205ENST00000469129 ZSWIM7Q19AV6 140 aa8.72□□□□□ -1.01
SMC1A-205ENST00000469129 HLA-BQ31612 363 aa8.72□□□□□ -1.01
SMC1A-205ENST00000469129 ZNF528Q3MIS6 628 aa8.72□□□□□ -1.01
SMC1A-205ENST00000469129 CYP27C1Q4G0S4 372 aa8.72□□□□□ -1.01
SMC1A-205ENST00000469129 DCST1Q5T197 706 aa8.72□□□□□ -1.01
SMC1A-205ENST00000469129 MLIPQ5VWP3 458 aa8.72□□□□□ -1.01
SMC1A-205ENST00000469129 FRRS1Q6ZNA5 592 aa8.72□□□□□ -1.01
SMC1A-205ENST00000469129 RANBP3LQ86VV4 465 aaPredicted RBP8.72□□□□□ -1.01
SMC1A-205ENST00000469129 DEPDC4Q8N2C3 294 aa8.72□□□□□ -1.01
SMC1A-205ENST00000469129 DTWD2Q8NBA8 298 aa8.72□□□□□ -1.01
SMC1A-205ENST00000469129 SLC16A11Q8NCK7 471 aa8.72□□□□□ -1.01
SMC1A-205ENST00000469129 OR52P1PQ8NH57 321 aa8.72□□□□□ -1.01
SMC1A-205ENST00000469129 OR51Q1Q8NH59 317 aa8.72□□□□□ -1.01
SMC1A-205ENST00000469129 HOXB13Q92826 284 aaPredicted RBP8.72□□□□□ -1.01
SMC1A-205ENST00000469129 RIT1Q92963 219 aa8.72□□□□□ -1.01
SMC1A-205ENST00000469129 ZNF566Q969W8 418 aa8.72□□□□□ -1.01
SMC1A-205ENST00000469129 FAM122AQ96E09 287 aa8.72□□□□□ -1.01
SMC1A-205ENST00000469129 OTUB1Q96FW1 271 aaPredicted RBP8.72□□□□□ -1.01
SMC1A-205ENST00000469129 SLC35A4Q96G79 324 aa8.72□□□□□ -1.01
SMC1A-205ENST00000469129 RBM18Q96H35 190 aaKnown RBP8.72□□□□□ -1.01
SMC1A-205ENST00000469129 ART5Q96L15 291 aa8.72□□□□□ -1.01
SMC1A-205ENST00000469129 FEVQ99581 238 aa8.72□□□□□ -1.01
SMC1A-205ENST00000469129 BARD1Q99728 777 aaKnown RBP8.72□□□□□ -1.01
SMC1A-205ENST00000469129 LMF2Q9BU23 707 aaKnown RBP8.72□□□□□ -1.01
SMC1A-205ENST00000469129 FNDC11Q9BVV2 318 aa8.72□□□□□ -1.01
SMC1A-205ENST00000469129 RBCK1Q9BYM8 510 aa8.72□□□□□ -1.01
SMC1A-205ENST00000469129 GRIP2Q9C0E4 1043 aa8.72□□□□□ -1.01
SMC1A-205ENST00000469129 ZNF350Q9GZX5 532 aa8.72□□□□□ -1.01
SMC1A-205ENST00000469129 SPRTNQ9H040 489 aaPredicted RBP8.72□□□□□ -1.01
SMC1A-205ENST00000469129 SOX17Q9H6I2 414 aaPredicted RBP8.72□□□□□ -1.01
SMC1A-205ENST00000469129 GAREM1Q9H706 876 aa8.72□□□□□ -1.01
SMC1A-205ENST00000469129 CXorf21Q9HAI6 301 aa8.72□□□□□ -1.01
SMC1A-205ENST00000469129 ACER3Q9NUN7 267 aa8.72□□□□□ -1.01
SMC1A-205ENST00000469129 TMEM74BQ9NUR3 256 aa8.72□□□□□ -1.01
SMC1A-205ENST00000469129 NDOR1Q9UHB4 597 aa8.72□□□□□ -1.01
SMC1A-205ENST00000469129 SERTAD3Q9UJW9 196 aa8.72□□□□□ -1.01
SMC1A-205ENST00000469129 SLC6A14Q9UN76 642 aa8.72□□□□□ -1.01
SMC1A-205ENST00000469129 ZNF443Q9Y2A4 671 aaPredicted RBP8.72□□□□□ -1.01
SMC1A-205ENST00000469129 PCDHGB5Q9Y5G0 923 aa8.72□□□□□ -1.01
SMC1A-205ENST00000469129 RP1P56715 2156 aa8.72□□□□□ -1.01
SMC1A-205ENST00000469129 ARID1BQ8NFD5 2236 aaPredicted RBP8.72□□□□□ -1.01
SMC1A-205ENST00000469129 FER1L5A0AVI2 2057 aa8.71□□□□□ -1.01
SMC1A-205ENST00000469129 A0A1B0GX78 115 aa8.71□□□□□ -1.02
SMC1A-205ENST00000469129 A0A1W2PRQ8 180 aa8.71□□□□□ -1.02
SMC1A-205ENST00000469129 TRIM64CA6NLI5 447 aa8.71□□□□□ -1.02
SMC1A-205ENST00000469129 J3KTA2 159 aa8.71□□□□□ -1.02
SMC1A-205ENST00000469129 AP3D1O14617 1153 aa8.71□□□□□ -1.02
SMC1A-205ENST00000469129 MITFO75030 526 aaPredicted RBP8.71□□□□□ -1.02
SMC1A-205ENST00000469129 NKX2-2O95096 273 aa8.71□□□□□ -1.02
SMC1A-205ENST00000469129 MED26O95402 600 aa8.71□□□□□ -1.02
SMC1A-205ENST00000469129 CPNE6O95741 557 aa8.71□□□□□ -1.02
SMC1A-205ENST00000469129 CBX7O95931 251 aa8.71□□□□□ -1.02
SMC1A-205ENST00000469129 CTSBP07858 339 aa8.71□□□□□ -1.02
SMC1A-205ENST00000469129 CCDC159P0C7I6 412 aa8.71□□□□□ -1.02
SMC1A-205ENST00000469129 CCNYL3P0C7X3 344 aa8.71□□□□□ -1.02
SMC1A-205ENST00000469129 CYP4B1P13584 511 aa8.71□□□□□ -1.02
SMC1A-205ENST00000469129 IL7RP16871 459 aa8.71□□□□□ -1.02
SMC1A-205ENST00000469129 RPS4Y1P22090 263 aaKnown RBP8.71□□□□□ -1.02
SMC1A-205ENST00000469129 CBLP22681 906 aa8.71□□□□□ -1.02
SMC1A-205ENST00000469129 TTKP33981 857 aa8.71□□□□□ -1.02
SMC1A-205ENST00000469129 IFNGR2P38484 337 aa8.71□□□□□ -1.02
SMC1A-205ENST00000469129 YAP1P46937 504 aaKnown RBP8.71□□□□□ -1.02
SMC1A-205ENST00000469129 GCGRP47871 477 aa8.71□□□□□ -1.02
SMC1A-205ENST00000469129 PDX1P52945 283 aa8.71□□□□□ -1.02
SMC1A-205ENST00000469129 PSMD4P55036 377 aaKnown RBP8.71□□□□□ -1.02
SMC1A-205ENST00000469129 RGS8P57771 180 aaPredicted RBP8.71□□□□□ -1.02
SMC1A-205ENST00000469129 TAS2R41P59536 307 aa8.71□□□□□ -1.02
SMC1A-205ENST00000469129 CXCR4P61073 352 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms