RNA–Protein interactions for RNA: ENST00000468565.1

COL27A1-203, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 1,946 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-203ENST00000468565 SOX3P41225 446 aa13.37□□□□□ -0.27
COL27A1-203ENST00000468565 MEOX1P50221 254 aa13.37□□□□□ -0.27
COL27A1-203ENST00000468565 TRA2BP62995 288 aaKnown RBP13.37□□□□□ -0.27
COL27A1-203ENST00000468565 SRSF11Q05519 484 aaKnown RBP13.37□□□□□ -0.27
COL27A1-203ENST00000468565 OPN5Q6U736 354 aa13.37□□□□□ -0.27
COL27A1-203ENST00000468565 MDGA2Q7Z553 956 aa13.37□□□□□ -0.27
COL27A1-203ENST00000468565 SULF2Q8IWU5 870 aa13.37□□□□□ -0.27
COL27A1-203ENST00000468565 C9orf40Q8IXQ3 194 aa13.37□□□□□ -0.27
COL27A1-203ENST00000468565 PSD4Q8NDX1 1056 aa13.37□□□□□ -0.27
COL27A1-203ENST00000468565 OR4K14Q8NGD5 310 aa13.37□□□□□ -0.27
COL27A1-203ENST00000468565 OR9I1Q8NGQ6 314 aa13.37□□□□□ -0.27
COL27A1-203ENST00000468565 UCN3Q969E3 161 aa13.37□□□□□ -0.27
COL27A1-203ENST00000468565 BTBD9Q96Q07 612 aa13.37□□□□□ -0.27
COL27A1-203ENST00000468565 CNPPD1Q9BV87 410 aa13.37□□□□□ -0.27
COL27A1-203ENST00000468565 TUBB1Q9H4B7 451 aa13.37□□□□□ -0.27
COL27A1-203ENST00000468565 PLEKHB1Q9UF11 243 aaPredicted RBP13.37□□□□□ -0.27
COL27A1-203ENST00000468565 PCDHA9Q9Y5H5 950 aa13.37□□□□□ -0.27
COL27A1-203ENST00000468565 PTGDR2Q9Y5Y4 395 aa13.37□□□□□ -0.27
COL27A1-203ENST00000468565 SERTM1A2A2V5 107 aa13.37□□□□□ -0.27
COL27A1-203ENST00000468565 OR6C76A6NM76 312 aa13.37□□□□□ -0.27
COL27A1-203ENST00000468565 NPIPA5E9PKD4 350 aa13.37□□□□□ -0.27
COL27A1-203ENST00000468565 HRKO00198 91 aa13.37□□□□□ -0.27
COL27A1-203ENST00000468565 ANGPT2O15123 496 aa13.37□□□□□ -0.27
COL27A1-203ENST00000468565 MRPL19P49406 292 aaKnown RBP13.37□□□□□ -0.27
COL27A1-203ENST00000468565 ERVK-8P63133 956 aa13.37□□□□□ -0.27
COL27A1-203ENST00000468565 C8orf82Q6P1X6 216 aaPredicted RBP13.37□□□□□ -0.27
COL27A1-203ENST00000468565 IL20RBQ6UXL0 311 aa13.37□□□□□ -0.27
COL27A1-203ENST00000468565 RTL4Q6ZR62 310 aa13.37□□□□□ -0.27
COL27A1-203ENST00000468565 FUNDC1Q8IVP5 155 aa13.37□□□□□ -0.27
COL27A1-203ENST00000468565 ZFP62Q8NB50 900 aaPredicted RBP13.37□□□□□ -0.27
COL27A1-203ENST00000468565 GOLM1Q8NBJ4 401 aa13.37□□□□□ -0.27
COL27A1-203ENST00000468565 ADCY4Q8NFM4 1077 aa13.37□□□□□ -0.27
COL27A1-203ENST00000468565 C16orf52Q8NHV5 167 aa13.37□□□□□ -0.27
COL27A1-203ENST00000468565 TSPEARQ8WU66 669 aa13.37□□□□□ -0.27
COL27A1-203ENST00000468565 CHTF18Q8WVB6 975 aa13.37□□□□□ -0.27
COL27A1-203ENST00000468565 HBEGFQ99075 208 aa13.37□□□□□ -0.27
COL27A1-203ENST00000468565 HOPXQ9BPY8 73 aaPredicted RBP13.37□□□□□ -0.27
COL27A1-203ENST00000468565 TMUB1Q9BVT8 246 aa13.37□□□□□ -0.27
COL27A1-203ENST00000468565 SDR39U1Q9NRG7 319 aaPredicted RBP13.37□□□□□ -0.27
COL27A1-203ENST00000468565 GID8Q9NWU2 228 aa13.37□□□□□ -0.27
COL27A1-203ENST00000468565 TMEM181Q9P2C4 612 aa13.37□□□□□ -0.27
COL27A1-203ENST00000468565 NPIPA1Q9UND3 350 aa13.37□□□□□ -0.27
COL27A1-203ENST00000468565 ERVK-19Q9WJR5 959 aa13.37□□□□□ -0.27
COL27A1-203ENST00000468565 PRSS51A0A1B0GVH4 220 aa13.36□□□□□ -0.27
COL27A1-203ENST00000468565 DPPA5A6NC42 116 aa13.36□□□□□ -0.27
COL27A1-203ENST00000468565 C8BP07358 591 aa13.36□□□□□ -0.27
COL27A1-203ENST00000468565 AQP4P55087 323 aa13.36□□□□□ -0.27
COL27A1-203ENST00000468565 SLC37A1P57057 533 aa13.36□□□□□ -0.27
COL27A1-203ENST00000468565 MED21Q13503 144 aa13.36□□□□□ -0.27
COL27A1-203ENST00000468565 ZNF267Q14586 743 aaPredicted RBP13.36□□□□□ -0.27
COL27A1-203ENST00000468565 COQ5Q5HYK3 327 aa13.36□□□□□ -0.27
COL27A1-203ENST00000468565 RNFT1Q5M7Z0 435 aa13.36□□□□□ -0.27
COL27A1-203ENST00000468565 C1QL3Q5VWW1 255 aa13.36□□□□□ -0.27
COL27A1-203ENST00000468565 FAM219BQ5XKK7 198 aa13.36□□□□□ -0.27
COL27A1-203ENST00000468565 SLC48A1Q6P1K1 146 aa13.36□□□□□ -0.27
COL27A1-203ENST00000468565 SLC29A4Q7RTT9 530 aa13.36□□□□□ -0.27
COL27A1-203ENST00000468565 GHDCQ8N2G8 530 aa13.36□□□□□ -0.27
COL27A1-203ENST00000468565 SLC15A4Q8N697 577 aa13.36□□□□□ -0.27
COL27A1-203ENST00000468565 C1orf52Q8N6N3 182 aaKnown RBP13.36□□□□□ -0.27
COL27A1-203ENST00000468565 SLC22A8Q8TCC7 542 aa13.36□□□□□ -0.27
COL27A1-203ENST00000468565 TM4SF18Q96CE8 201 aa13.36□□□□□ -0.27
COL27A1-203ENST00000468565 SGCZQ96LD1 299 aa13.36□□□□□ -0.27
COL27A1-203ENST00000468565 ACPTQ9BZG2 426 aa13.36□□□□□ -0.27
COL27A1-203ENST00000468565 Q9H521 79 aa13.36□□□□□ -0.27
COL27A1-203ENST00000468565 CXorf21Q9HAI6 301 aa13.36□□□□□ -0.27
COL27A1-203ENST00000468565 CD300AQ9UGN4 299 aa13.36□□□□□ -0.27
COL27A1-203ENST00000468565 CES1P1Q9UKY3 287 aa13.36□□□□□ -0.27
COL27A1-203ENST00000468565 ZNF835Q9Y2P0 537 aa13.36□□□□□ -0.27
COL27A1-203ENST00000468565 TIMM22Q9Y584 194 aa13.36□□□□□ -0.27
COL27A1-203ENST00000468565 NCOA6Q14686 2063 aaPredicted RBP13.36□□□□□ -0.27
COL27A1-203ENST00000468565 ASNA1O43681 348 aa13.35□□□□□ -0.27
COL27A1-203ENST00000468565 ZNF354AO60765 605 aaPredicted RBP13.35□□□□□ -0.27
COL27A1-203ENST00000468565 WISP2O76076 250 aa13.35□□□□□ -0.27
COL27A1-203ENST00000468565 CLPSP04118 112 aa13.35□□□□□ -0.27
COL27A1-203ENST00000468565 CPMP14384 443 aa13.35□□□□□ -0.27
COL27A1-203ENST00000468565 CA7P43166 264 aa13.35□□□□□ -0.27
COL27A1-203ENST00000468565 HTR6P50406 440 aa13.35□□□□□ -0.27
COL27A1-203ENST00000468565 XKP51811 444 aa13.35□□□□□ -0.27
COL27A1-203ENST00000468565 NME5P56597 212 aa13.35□□□□□ -0.27
COL27A1-203ENST00000468565 SPIN4Q56A73 249 aa13.35□□□□□ -0.27
COL27A1-203ENST00000468565 FJX1Q86VR8 437 aa13.35□□□□□ -0.27
COL27A1-203ENST00000468565 GALNT12Q8IXK2 581 aa13.35□□□□□ -0.27
COL27A1-203ENST00000468565 DND1Q8IYX4 353 aaKnown RBP13.35□□□□□ -0.27
COL27A1-203ENST00000468565 FAM156AQ8NDB6 213 aa13.35□□□□□ -0.27
COL27A1-203ENST00000468565 FAIM2Q9BWQ8 316 aa13.35□□□□□ -0.27
COL27A1-203ENST00000468565 TSPAN10Q9H1Z9 355 aaPredicted RBP13.35□□□□□ -0.27
COL27A1-203ENST00000468565 GIMAP2Q9UG22 337 aa13.35□□□□□ -0.27
COL27A1-203ENST00000468565 RIMS3Q9UJD0 308 aa13.35□□□□□ -0.27
COL27A1-203ENST00000468565 DNAJC13O75165 2243 aa13.35□□□□□ -0.27
COL27A1-203ENST00000468565 UTP20O75691 2785 aaKnown RBP13.35□□□□□ -0.27
COL27A1-203ENST00000468565 ZNF407Q9C0G0 2248 aa13.35□□□□□ -0.27
COL27A1-203ENST00000468565 PCNX1Q96RV3 2341 aa13.35□□□□□ -0.27
COL27A1-203ENST00000468565 TRGV8A0A0C4DH27 118 aa13.35□□□□□ -0.27
COL27A1-203ENST00000468565 A0A1W2PS29 197 aa13.35□□□□□ -0.27
COL27A1-203ENST00000468565 SLC19A2O60779 497 aa13.35□□□□□ -0.27
COL27A1-203ENST00000468565 NADKO95544 446 aaPredicted RBP13.35□□□□□ -0.27
COL27A1-203ENST00000468565 LYNP07948 512 aa13.35□□□□□ -0.27
COL27A1-203ENST00000468565 UBTFL6P0CB48 400 aaPredicted RBP13.35□□□□□ -0.27
COL27A1-203ENST00000468565 SLC7A2P52569 658 aa13.35□□□□□ -0.27
COL27A1-203ENST00000468565 CASP6P55212 293 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms