RNA–Protein interactions for RNA: ENST00000468143.1

CDHR3-205, Transcript of cadherin related family member 3, humanhuman

TSL 4

Gene CDHR3, Length 575 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-205ENST00000468143 C1orf50Q9BV19 199 aa10.56□□□□□ -0.72
CDHR3-205ENST00000468143 OSBPL11Q9BXB4 747 aa10.56□□□□□ -0.72
CDHR3-205ENST00000468143 REEP4Q9H6H4 257 aa10.56□□□□□ -0.72
CDHR3-205ENST00000468143 ACKR4Q9NPB9 350 aa10.56□□□□□ -0.72
CDHR3-205ENST00000468143 RYDENQ9NUL5 291 aaKnown RBP10.56□□□□□ -0.72
CDHR3-205ENST00000468143 DDX18Q9NVP1 670 aaKnown RBP10.56□□□□□ -0.72
CDHR3-205ENST00000468143 KLRF1Q9NZS2 232 aa10.56□□□□□ -0.72
CDHR3-205ENST00000468143 C19orf53Q9UNZ5 99 aaPredicted RBP10.56□□□□□ -0.72
CDHR3-205ENST00000468143 MAPRE3Q9UPY8 281 aa10.56□□□□□ -0.72
CDHR3-205ENST00000468143 SLC6A5Q9Y345 797 aa10.56□□□□□ -0.72
CDHR3-205ENST00000468143 OR10H1Q9Y4A9 318 aa10.56□□□□□ -0.72
CDHR3-205ENST00000468143 COL12A1Q99715 3063 aa10.56□□□□□ -0.72
CDHR3-205ENST00000468143 USP9YO00507 2555 aaPredicted RBP10.56□□□□□ -0.72
CDHR3-205ENST00000468143 PTPN13Q12923 2485 aa10.56□□□□□ -0.72
CDHR3-205ENST00000468143 ICE1Q9Y2F5 2266 aa10.55□□□□□ -0.72
CDHR3-205ENST00000468143 C15orf38-AP3S2A0A0A6YYH1 394 aa10.55□□□□□ -0.72
CDHR3-205ENST00000468143 OR14I1A6ND48 311 aa10.55□□□□□ -0.72
CDHR3-205ENST00000468143 C17orf51A8MQB3 221 aa10.55□□□□□ -0.72
CDHR3-205ENST00000468143 PLOD2O00469 737 aa10.55□□□□□ -0.72
CDHR3-205ENST00000468143 PDPK1O15530 556 aa10.55□□□□□ -0.72
CDHR3-205ENST00000468143 TSPAN2O60636 221 aa10.55□□□□□ -0.72
CDHR3-205ENST00000468143 COQ9O75208 318 aa10.55□□□□□ -0.72
CDHR3-205ENST00000468143 TUBBP07437 444 aa10.55□□□□□ -0.72
CDHR3-205ENST00000468143 AGAP20933 346 aa10.55□□□□□ -0.72
CDHR3-205ENST00000468143 BGNP21810 368 aa10.55□□□□□ -0.72
CDHR3-205ENST00000468143 ACVR2AP27037 513 aa10.55□□□□□ -0.72
CDHR3-205ENST00000468143 PTPN6P29350 595 aa10.55□□□□□ -0.72
CDHR3-205ENST00000468143 GPC1P35052 558 aa10.55□□□□□ -0.72
CDHR3-205ENST00000468143 KRT20P35900 424 aa10.55□□□□□ -0.72
CDHR3-205ENST00000468143 SERPINB5P36952 375 aa10.55□□□□□ -0.72
CDHR3-205ENST00000468143 RFX3P48380 749 aa10.55□□□□□ -0.72
CDHR3-205ENST00000468143 PSG6Q00889 435 aa10.55□□□□□ -0.72
CDHR3-205ENST00000468143 GAB1Q13480 694 aa10.55□□□□□ -0.72
CDHR3-205ENST00000468143 ATP6AP1LQ52LC2 224 aa10.55□□□□□ -0.72
CDHR3-205ENST00000468143 EIPR1Q53HC9 387 aa10.55□□□□□ -0.72
CDHR3-205ENST00000468143 XKR7Q5GH72 579 aa10.55□□□□□ -0.72
CDHR3-205ENST00000468143 TNFAIP8L3Q5GJ75 292 aa10.55□□□□□ -0.72
CDHR3-205ENST00000468143 IL23RQ5VWK5 629 aa10.55□□□□□ -0.72
CDHR3-205ENST00000468143 TIGD3Q6B0B8 471 aa10.55□□□□□ -0.72
CDHR3-205ENST00000468143 RTL6Q6ICC9 239 aa10.55□□□□□ -0.72
CDHR3-205ENST00000468143 OR5M10Q6IEU7 315 aa10.55□□□□□ -0.72
CDHR3-205ENST00000468143 SLC30A6Q6NXT4 461 aa10.55□□□□□ -0.72
CDHR3-205ENST00000468143 YRDCQ86U90 279 aaKnown RBP10.55□□□□□ -0.72
CDHR3-205ENST00000468143 CCDC71Q8IV32 467 aaPredicted RBP10.55□□□□□ -0.72
CDHR3-205ENST00000468143 OR2L13Q8N349 312 aa10.55□□□□□ -0.72
CDHR3-205ENST00000468143 ZNF781Q8N8C0 355 aa10.55□□□□□ -0.72
CDHR3-205ENST00000468143 ANKRD42Q8N9B4 389 aa10.55□□□□□ -0.72
CDHR3-205ENST00000468143 OR10Q1Q8NGQ4 319 aa10.55□□□□□ -0.72
CDHR3-205ENST00000468143 NEIL3Q8TAT5 605 aa10.55□□□□□ -0.72
CDHR3-205ENST00000468143 CA5BP1Q8WTZ4 195 aa10.55□□□□□ -0.72
CDHR3-205ENST00000468143 RND1Q92730 232 aa10.55□□□□□ -0.72
CDHR3-205ENST00000468143 MARVELD3Q96A59 401 aa10.55□□□□□ -0.72
CDHR3-205ENST00000468143 TUBGCP3Q96CW5 907 aa10.55□□□□□ -0.72
CDHR3-205ENST00000468143 NTNG2Q96CW9 530 aa10.55□□□□□ -0.72
CDHR3-205ENST00000468143 TMCO6Q96DC7 493 aa10.55□□□□□ -0.72
CDHR3-205ENST00000468143 TMEM41AQ96HV5 264 aa10.55□□□□□ -0.72
CDHR3-205ENST00000468143 PPP3R2Q96LZ3 170 aa10.55□□□□□ -0.72
CDHR3-205ENST00000468143 UCK2Q9BZX2 261 aa10.55□□□□□ -0.72
CDHR3-205ENST00000468143 C20orf27Q9GZN8 174 aa10.55□□□□□ -0.72
CDHR3-205ENST00000468143 STMN4Q9H169 189 aaPredicted RBP10.55□□□□□ -0.72
CDHR3-205ENST00000468143 SSU72Q9NP77 194 aaKnown RBP10.55□□□□□ -0.72
CDHR3-205ENST00000468143 EQTNQ9NQ60 294 aa10.55□□□□□ -0.72
CDHR3-205ENST00000468143 SERHLQ9NQF3 203 aa10.55□□□□□ -0.72
CDHR3-205ENST00000468143 QPCTLQ9NXS2 382 aa10.55□□□□□ -0.72
CDHR3-205ENST00000468143 COQ3Q9NZJ6 369 aa10.55□□□□□ -0.72
CDHR3-205ENST00000468143 RNF6Q9Y252 685 aa10.55□□□□□ -0.72
CDHR3-205ENST00000468143 C15orf41Q9Y2V0 281 aa10.55□□□□□ -0.72
CDHR3-205ENST00000468143 TMED5Q9Y3A6 229 aa10.55□□□□□ -0.72
CDHR3-205ENST00000468143 KLF2Q9Y5W3 355 aaPredicted RBP10.55□□□□□ -0.72
CDHR3-205ENST00000468143 PRRC2CQ9Y520 2896 aaKnown RBP10.54□□□□□ -0.72
CDHR3-205ENST00000468143 A0A087WV62 115 aa10.54□□□□□ -0.72
CDHR3-205ENST00000468143 PRAMEF25A6NGN4 478 aa10.54□□□□□ -0.72
CDHR3-205ENST00000468143 OR6C70A6NIJ9 312 aa10.54□□□□□ -0.72
CDHR3-205ENST00000468143 TM9SF1O15321 606 aa10.54□□□□□ -0.72
CDHR3-205ENST00000468143 SERPINE1P05121 402 aa10.54□□□□□ -0.72
CDHR3-205ENST00000468143 HPNP05981 417 aa10.54□□□□□ -0.72
CDHR3-205ENST00000468143 MYZAPP0CAP1 466 aa10.54□□□□□ -0.72
CDHR3-205ENST00000468143 CYP4B1P13584 511 aa10.54□□□□□ -0.72
CDHR3-205ENST00000468143 PRF1P14222 555 aa10.54□□□□□ -0.72
CDHR3-205ENST00000468143 IL12BP29460 328 aa10.54□□□□□ -0.72
CDHR3-205ENST00000468143 GABRA3P34903 492 aa10.54□□□□□ -0.72
CDHR3-205ENST00000468143 KIR3DL1P43629 444 aa10.54□□□□□ -0.72
CDHR3-205ENST00000468143 CDK9P50750 372 aaKnown RBP10.54□□□□□ -0.72
CDHR3-205ENST00000468143 MANFP55145 182 aaKnown RBP10.54□□□□□ -0.72
CDHR3-205ENST00000468143 ABCE1P61221 599 aaKnown RBP10.54□□□□□ -0.72
CDHR3-205ENST00000468143 PDCD2Q16342 344 aaPredicted RBP10.54□□□□□ -0.72
CDHR3-205ENST00000468143 C6orf136Q5SQH8 315 aa10.54□□□□□ -0.72
CDHR3-205ENST00000468143 LRIG3Q6UXM1 1119 aa10.54□□□□□ -0.72
CDHR3-205ENST00000468143 SZRD1Q7Z422 152 aa10.54□□□□□ -0.72
CDHR3-205ENST00000468143 WDSUB1Q8N9V3 476 aa10.54□□□□□ -0.72
CDHR3-205ENST00000468143 FNDC5Q8NAU1 212 aa10.54□□□□□ -0.72
CDHR3-205ENST00000468143 OR7A2PQ8NGA2 310 aa10.54□□□□□ -0.72
CDHR3-205ENST00000468143 PGM2Q96G03 612 aa10.54□□□□□ -0.72
CDHR3-205ENST00000468143 SLC35A4Q96G79 324 aa10.54□□□□□ -0.72
CDHR3-205ENST00000468143 TTYH2Q9BSA4 534 aa10.54□□□□□ -0.72
CDHR3-205ENST00000468143 UBQLN3Q9H347 655 aa10.54□□□□□ -0.72
CDHR3-205ENST00000468143 FLRT3Q9NZU0 649 aa10.54□□□□□ -0.72
CDHR3-205ENST00000468143 FAM215AQ9Y5M1 114 aa10.54□□□□□ -0.72
CDHR3-205ENST00000468143 EML6Q6ZMW3 1958 aa10.54□□□□□ -0.72
CDHR3-205ENST00000468143 GXYLT2A0PJZ3 443 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms