RNA–Protein interactions for RNA: ENST00000467852.1

VPS26A-204, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3

Gene VPS26A, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-204ENST00000467852 ADAMTS6Q9UKP5 1117 aa10.28□□□□□ -0.76
VPS26A-204ENST00000467852 ZNF337Q9Y3M9 751 aa10.28□□□□□ -0.76
VPS26A-204ENST00000467852 H3BML4 177 aa10.27□□□□□ -0.77
VPS26A-204ENST00000467852 H2AFYO75367 372 aaKnown RBP10.27□□□□□ -0.77
VPS26A-204ENST00000467852 AIFM1O95831 613 aa10.27□□□□□ -0.77
VPS26A-204ENST00000467852 COMTP21964 271 aa10.27□□□□□ -0.77
VPS26A-204ENST00000467852 PTAFRP25105 342 aa10.27□□□□□ -0.77
VPS26A-204ENST00000467852 CNTFP26441 200 aa10.27□□□□□ -0.77
VPS26A-204ENST00000467852 GIFP27352 417 aa10.27□□□□□ -0.77
VPS26A-204ENST00000467852 APOBEC3AP31941 199 aaPredicted RBP10.27□□□□□ -0.77
VPS26A-204ENST00000467852 DSCR4P56555 118 aaPredicted RBP10.27□□□□□ -0.77
VPS26A-204ENST00000467852 CLDN20P56880 219 aa10.27□□□□□ -0.77
VPS26A-204ENST00000467852 ITGADQ13349 1161 aa10.27□□□□□ -0.77
VPS26A-204ENST00000467852 TSNAXIP1Q2TAA8 658 aa10.27□□□□□ -0.77
VPS26A-204ENST00000467852 PCID2Q5JVF3 399 aa10.27□□□□□ -0.77
VPS26A-204ENST00000467852 ZNF549Q6P9A3 640 aa10.27□□□□□ -0.77
VPS26A-204ENST00000467852 C17orf107Q6ZR85 190 aa10.27□□□□□ -0.77
VPS26A-204ENST00000467852 TMPRSS11BQ86T26 416 aa10.27□□□□□ -0.77
VPS26A-204ENST00000467852 GBP7Q8N8V2 638 aaPredicted RBP10.27□□□□□ -0.77
VPS26A-204ENST00000467852 SYT14Q8NB59 555 aa10.27□□□□□ -0.77
VPS26A-204ENST00000467852 ADCY4Q8NFM4 1077 aa10.27□□□□□ -0.77
VPS26A-204ENST00000467852 ADIPOR1Q96A54 375 aa10.27□□□□□ -0.77
VPS26A-204ENST00000467852 LRRC37BQ96QE4 947 aa10.27□□□□□ -0.77
VPS26A-204ENST00000467852 INPP5KQ9BT40 448 aa10.27□□□□□ -0.77
VPS26A-204ENST00000467852 ROGDIQ9GZN7 287 aa10.27□□□□□ -0.77
VPS26A-204ENST00000467852 CCDC68Q9H2F9 335 aa10.27□□□□□ -0.77
VPS26A-204ENST00000467852 ZMAT3Q9HA38 289 aaKnown RBP10.27□□□□□ -0.77
VPS26A-204ENST00000467852 FN3KRPQ9HA64 309 aa10.27□□□□□ -0.77
VPS26A-204ENST00000467852 ETNK1Q9HBU6 452 aa10.27□□□□□ -0.77
VPS26A-204ENST00000467852 SMYD2Q9NRG4 433 aa10.27□□□□□ -0.77
VPS26A-204ENST00000467852 MCTS1Q9ULC4 181 aaKnown RBP10.27□□□□□ -0.77
VPS26A-204ENST00000467852 NENFQ9UMX5 172 aa10.27□□□□□ -0.77
VPS26A-204ENST00000467852 DHRS7Q9Y394 339 aa10.27□□□□□ -0.77
VPS26A-204ENST00000467852 WNK2Q9Y3S1 2297 aa10.27□□□□□ -0.77
VPS26A-204ENST00000467852 ANKDD1BA6NHY2 528 aa10.26□□□□□ -0.77
VPS26A-204ENST00000467852 CLPSP04118 112 aa10.26□□□□□ -0.77
VPS26A-204ENST00000467852 TMEM253P0C7T8 217 aa10.26□□□□□ -0.77
VPS26A-204ENST00000467852 PRTN3P24158 256 aa10.26□□□□□ -0.77
VPS26A-204ENST00000467852 FPR2P25090 351 aa10.26□□□□□ -0.77
VPS26A-204ENST00000467852 GSTM2P28161 218 aa10.26□□□□□ -0.77
VPS26A-204ENST00000467852 EIF1AXP47813 144 aaKnown RBP10.26□□□□□ -0.77
VPS26A-204ENST00000467852 SLC6A8P48029 635 aa10.26□□□□□ -0.77
VPS26A-204ENST00000467852 LOXL3P58215 753 aa10.26□□□□□ -0.77
VPS26A-204ENST00000467852 HMGCS1Q01581 520 aa10.26□□□□□ -0.77
VPS26A-204ENST00000467852 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.26□□□□□ -0.77
VPS26A-204ENST00000467852 GTF2IRD2BQ6EKJ0 949 aa10.26□□□□□ -0.77
VPS26A-204ENST00000467852 OR5M10Q6IEU7 315 aa10.26□□□□□ -0.77
VPS26A-204ENST00000467852 LRRC8EQ6NSJ5 796 aa10.26□□□□□ -0.77
VPS26A-204ENST00000467852 KLHL17Q6TDP4 642 aa10.26□□□□□ -0.77
VPS26A-204ENST00000467852 B3GLCTQ6Y288 498 aa10.26□□□□□ -0.77
VPS26A-204ENST00000467852 GTF2IRD2Q86UP8 949 aa10.26□□□□□ -0.77
VPS26A-204ENST00000467852 CPNE9Q8IYJ1 553 aa10.26□□□□□ -0.77
VPS26A-204ENST00000467852 KATNAL2Q8IYT4 538 aa10.26□□□□□ -0.77
VPS26A-204ENST00000467852 FAM71DQ8N9W8 422 aa10.26□□□□□ -0.77
VPS26A-204ENST00000467852 C17orf47Q8NEP4 570 aa10.26□□□□□ -0.77
VPS26A-204ENST00000467852 TANKQ92844 425 aa10.26□□□□□ -0.77
VPS26A-204ENST00000467852 TMCO6Q96DC7 493 aa10.26□□□□□ -0.77
VPS26A-204ENST00000467852 FBXO17Q96EF6 278 aa10.26□□□□□ -0.77
VPS26A-204ENST00000467852 ACSS1Q9NUB1 689 aaPredicted RBP10.26□□□□□ -0.77
VPS26A-204ENST00000467852 NPAP1Q9NZP6 1156 aa10.26□□□□□ -0.77
VPS26A-204ENST00000467852 CORO1CQ9ULV4 474 aaPredicted RBP10.26□□□□□ -0.77
VPS26A-204ENST00000467852 PCDHB14Q9Y5E9 798 aa10.26□□□□□ -0.77
VPS26A-204ENST00000467852 ATP23Q9Y6H3 246 aa10.26□□□□□ -0.77
VPS26A-204ENST00000467852 LOC105371242A0A075B767 164 aa10.25□□□□□ -0.77
VPS26A-204ENST00000467852 TMEM229AB2RXF0 380 aa10.25□□□□□ -0.77
VPS26A-204ENST00000467852 GOLGA8KD6RF30 607 aa10.25□□□□□ -0.77
VPS26A-204ENST00000467852 GOLGA8TH3BQL2 631 aa10.25□□□□□ -0.77
VPS26A-204ENST00000467852 CLEC3AO75596 197 aa10.25□□□□□ -0.77
VPS26A-204ENST00000467852 VAPBO95292 243 aa10.25□□□□□ -0.77
VPS26A-204ENST00000467852 SYNGR4O95473 234 aa10.25□□□□□ -0.77
VPS26A-204ENST00000467852 PNPP00491 289 aa10.25□□□□□ -0.77
VPS26A-204ENST00000467852 HK1P19367 917 aa10.25□□□□□ -0.77
VPS26A-204ENST00000467852 MDKP21741 143 aaPredicted RBP10.25□□□□□ -0.77
VPS26A-204ENST00000467852 AGTR1P30556 359 aa10.25□□□□□ -0.77
VPS26A-204ENST00000467852 SSTR4P31391 388 aa10.25□□□□□ -0.77
VPS26A-204ENST00000467852 GRIA1P42261 906 aa10.25□□□□□ -0.77
VPS26A-204ENST00000467852 NPY2RP49146 381 aa10.25□□□□□ -0.77
VPS26A-204ENST00000467852 GDF10P55107 478 aa10.25□□□□□ -0.77
VPS26A-204ENST00000467852 SNRPD2P62316 118 aaKnown RBP10.25□□□□□ -0.77
VPS26A-204ENST00000467852 MAP4K2Q12851 820 aa10.25□□□□□ -0.77
VPS26A-204ENST00000467852 ADPRMQ3LIE5 342 aa10.25□□□□□ -0.77
VPS26A-204ENST00000467852 TIMM23BQ5SRD1 257 aa10.25□□□□□ -0.77
VPS26A-204ENST00000467852 ZNF470Q6ECI4 717 aa10.25□□□□□ -0.77
VPS26A-204ENST00000467852 MFSD12Q6NUT3 480 aa10.25□□□□□ -0.77
VPS26A-204ENST00000467852 TMIGD1Q6UXZ0 262 aa10.25□□□□□ -0.77
VPS26A-204ENST00000467852 ANKS4BQ8N8V4 417 aa10.25□□□□□ -0.77
VPS26A-204ENST00000467852 TRIM58Q8NG06 486 aa10.25□□□□□ -0.77
VPS26A-204ENST00000467852 OR4K17Q8NGC6 315 aa10.25□□□□□ -0.77
VPS26A-204ENST00000467852 KCNJ9Q92806 393 aa10.25□□□□□ -0.77
VPS26A-204ENST00000467852 GPR21Q99679 349 aa10.25□□□□□ -0.77
VPS26A-204ENST00000467852 C1QTNF5Q9BXJ0 243 aa10.25□□□□□ -0.77
VPS26A-204ENST00000467852 RPF2Q9H7B2 306 aaKnown RBP10.25□□□□□ -0.77
VPS26A-204ENST00000467852 MYNNQ9NPC7 610 aa10.25□□□□□ -0.77
VPS26A-204ENST00000467852 PRDM7Q9NQW5 492 aa10.25□□□□□ -0.77
VPS26A-204ENST00000467852 TREX1Q9NSU2 369 aa10.25□□□□□ -0.77
VPS26A-204ENST00000467852 PAQR5Q9NXK6 330 aaPredicted RBP10.25□□□□□ -0.77
VPS26A-204ENST00000467852 STOML1Q9UBI4 398 aa10.25□□□□□ -0.77
VPS26A-204ENST00000467852 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.25□□□□□ -0.77
VPS26A-204ENST00000467852 KCNE2Q9Y6J6 123 aa10.25□□□□□ -0.77
VPS26A-204ENST00000467852 PCNX3Q9H6A9 2034 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms