RNA–Protein interactions for RNA: ENST00000467553.2

CCHCR1-211, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 589 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-211ENST00000467553 MAPK1P28482 360 aa12.9□□□□□ -0.34
CCHCR1-211ENST00000467553 PPICP45877 212 aa12.9□□□□□ -0.34
CCHCR1-211ENST00000467553 RIPPLY3P57055 190 aa12.9□□□□□ -0.34
CCHCR1-211ENST00000467553 KCNJ2P63252 427 aa12.9□□□□□ -0.34
CCHCR1-211ENST00000467553 SLC10A1Q14973 349 aa12.9□□□□□ -0.34
CCHCR1-211ENST00000467553 PDCD2Q16342 344 aaPredicted RBP12.9□□□□□ -0.34
CCHCR1-211ENST00000467553 GXYLT1Q4G148 440 aa12.9□□□□□ -0.34
CCHCR1-211ENST00000467553 C6orf136Q5SQH8 315 aa12.9□□□□□ -0.34
CCHCR1-211ENST00000467553 NCCRP1Q6ZVX7 275 aaPredicted RBP12.9□□□□□ -0.34
CCHCR1-211ENST00000467553 MARVELD2Q8N4S9 558 aa12.9□□□□□ -0.34
CCHCR1-211ENST00000467553 FNDC5Q8NAU1 212 aa12.9□□□□□ -0.34
CCHCR1-211ENST00000467553 C17orf47Q8NEP4 570 aa12.9□□□□□ -0.34
CCHCR1-211ENST00000467553 OR7G2Q8NG99 324 aa12.9□□□□□ -0.34
CCHCR1-211ENST00000467553 SARAFQ96BY9 339 aa12.9□□□□□ -0.34
CCHCR1-211ENST00000467553 PPCDCQ96CD2 204 aa12.9□□□□□ -0.34
CCHCR1-211ENST00000467553 HSPBAP1Q96EW2 488 aa12.9□□□□□ -0.34
CCHCR1-211ENST00000467553 JSRP1Q96MG2 331 aaPredicted RBP12.9□□□□□ -0.34
CCHCR1-211ENST00000467553 KCNN3Q9UGI6 736 aa12.9□□□□□ -0.34
CCHCR1-211ENST00000467553 RNF6Q9Y252 685 aa12.9□□□□□ -0.34
CCHCR1-211ENST00000467553 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.9□□□□□ -0.34
CCHCR1-211ENST00000467553 RAP2CQ9Y3L5 183 aa12.9□□□□□ -0.34
CCHCR1-211ENST00000467553 INTS1Q8N201 2190 aaKnown RBP12.89□□□□□ -0.35
CCHCR1-211ENST00000467553 PLOD3O60568 738 aa12.89□□□□□ -0.35
CCHCR1-211ENST00000467553 GABRA1P14867 456 aa12.89□□□□□ -0.35
CCHCR1-211ENST00000467553 DRD5P21918 477 aa12.89□□□□□ -0.35
CCHCR1-211ENST00000467553 ACVR2AP27037 513 aa12.89□□□□□ -0.35
CCHCR1-211ENST00000467553 MSX1P28360 303 aa12.89□□□□□ -0.35
CCHCR1-211ENST00000467553 PEX19P40855 299 aa12.89□□□□□ -0.35
CCHCR1-211ENST00000467553 ASMTP46597 345 aa12.89□□□□□ -0.35
CCHCR1-211ENST00000467553 TMED10P49755 219 aaKnown RBP12.89□□□□□ -0.35
CCHCR1-211ENST00000467553 RPL14P50914 215 aaKnown RBP12.89□□□□□ -0.35
CCHCR1-211ENST00000467553 WDR4P57081 412 aaKnown RBP12.89□□□□□ -0.35
CCHCR1-211ENST00000467553 DCAF7P61962 342 aa12.89□□□□□ -0.35
CCHCR1-211ENST00000467553 TFF3Q07654 80 aa12.89□□□□□ -0.35
CCHCR1-211ENST00000467553 PMPCAQ10713 525 aa12.89□□□□□ -0.35
CCHCR1-211ENST00000467553 XKR7Q5GH72 579 aa12.89□□□□□ -0.35
CCHCR1-211ENST00000467553 EMC4Q5J8M3 183 aa12.89□□□□□ -0.35
CCHCR1-211ENST00000467553 IL23RQ5VWK5 629 aa12.89□□□□□ -0.35
CCHCR1-211ENST00000467553 TMEM107Q6UX40 140 aa12.89□□□□□ -0.35
CCHCR1-211ENST00000467553 SPNS3Q6ZMD2 512 aa12.89□□□□□ -0.35
CCHCR1-211ENST00000467553 TRILQ7L0X0 811 aa12.89□□□□□ -0.35
CCHCR1-211ENST00000467553 ZNF551Q7Z340 670 aaPredicted RBP12.89□□□□□ -0.35
CCHCR1-211ENST00000467553 DMRTC2Q8IXT2 367 aaPredicted RBP12.89□□□□□ -0.35
CCHCR1-211ENST00000467553 LIX1Q8N485 282 aa12.89□□□□□ -0.35
CCHCR1-211ENST00000467553 CIDECQ96AQ7 238 aaPredicted RBP12.89□□□□□ -0.35
CCHCR1-211ENST00000467553 TLCD1Q96CP7 247 aa12.89□□□□□ -0.35
CCHCR1-211ENST00000467553 ERP27Q96DN0 273 aa12.89□□□□□ -0.35
CCHCR1-211ENST00000467553 OMA1Q96E52 524 aa12.89□□□□□ -0.35
CCHCR1-211ENST00000467553 AMDHD1Q96NU7 426 aa12.89□□□□□ -0.35
CCHCR1-211ENST00000467553 SORT1Q99523 831 aa12.89□□□□□ -0.35
CCHCR1-211ENST00000467553 C1orf50Q9BV19 199 aa12.89□□□□□ -0.35
CCHCR1-211ENST00000467553 FOLH1BQ9HBA9 442 aa12.89□□□□□ -0.35
CCHCR1-211ENST00000467553 PROK2Q9HC23 129 aa12.89□□□□□ -0.35
CCHCR1-211ENST00000467553 SH2D2AQ9NP31 389 aa12.89□□□□□ -0.35
CCHCR1-211ENST00000467553 QPCTLQ9NXS2 382 aa12.89□□□□□ -0.35
CCHCR1-211ENST00000467553 NKIRAS1Q9NYS0 192 aa12.89□□□□□ -0.35
CCHCR1-211ENST00000467553 TAS2R9Q9NYW1 312 aa12.89□□□□□ -0.35
CCHCR1-211ENST00000467553 CNOT11Q9UKZ1 510 aaKnown RBP12.89□□□□□ -0.35
CCHCR1-211ENST00000467553 HRH3Q9Y5N1 445 aa12.89□□□□□ -0.35
CCHCR1-211ENST00000467553 CHCHD2Q9Y6H1 151 aaPredicted RBP12.89□□□□□ -0.35
CCHCR1-211ENST00000467553 F8P00451 2351 aa12.89□□□□□ -0.35
CCHCR1-211ENST00000467553 HIVEP1P15822 2718 aa12.88□□□□□ -0.35
CCHCR1-211ENST00000467553 NPIPA2E9PIF3 369 aa12.88□□□□□ -0.35
CCHCR1-211ENST00000467553 NPIPA3F8WFD2 350 aa12.88□□□□□ -0.35
CCHCR1-211ENST00000467553 PDPK1O15530 556 aa12.88□□□□□ -0.35
CCHCR1-211ENST00000467553 ERN1O75460 977 aaKnown RBP12.88□□□□□ -0.35
CCHCR1-211ENST00000467553 REM1O75628 298 aa12.88□□□□□ -0.35
CCHCR1-211ENST00000467553 PPM1BO75688 479 aa12.88□□□□□ -0.35
CCHCR1-211ENST00000467553 TOXO94900 526 aa12.88□□□□□ -0.35
CCHCR1-211ENST00000467553 ABCB1P08183 1280 aaPredicted RBP12.88□□□□□ -0.35
CCHCR1-211ENST00000467553 GPC1P35052 558 aa12.88□□□□□ -0.35
CCHCR1-211ENST00000467553 MC3RP41968 323 aa12.88□□□□□ -0.35
CCHCR1-211ENST00000467553 MAGEA5P43359 124 aa12.88□□□□□ -0.35
CCHCR1-211ENST00000467553 MAN2A2P49641 1150 aa12.88□□□□□ -0.35
CCHCR1-211ENST00000467553 MANFP55145 182 aaKnown RBP12.88□□□□□ -0.35
CCHCR1-211ENST00000467553 RPP38P78345 283 aaKnown RBP12.88□□□□□ -0.35
CCHCR1-211ENST00000467553 PLCXD2Q0VAA5 305 aa12.88□□□□□ -0.35
CCHCR1-211ENST00000467553 BST1Q10588 318 aa12.88□□□□□ -0.35
CCHCR1-211ENST00000467553 FOXO1Q12778 655 aa12.88□□□□□ -0.35
CCHCR1-211ENST00000467553 RPS6KA2Q15349 733 aa12.88□□□□□ -0.35
CCHCR1-211ENST00000467553 ZNF385BQ569K4 471 aa12.88□□□□□ -0.35
CCHCR1-211ENST00000467553 WLSQ5T9L3 541 aa12.88□□□□□ -0.35
CCHCR1-211ENST00000467553 TMEM198Q66K66 360 aa12.88□□□□□ -0.35
CCHCR1-211ENST00000467553 BICRALQ6AI39 1079 aa12.88□□□□□ -0.35
CCHCR1-211ENST00000467553 DESI1Q6ICB0 168 aa12.88□□□□□ -0.35
CCHCR1-211ENST00000467553 B3GNT6Q6ZMB0 384 aa12.88□□□□□ -0.35
CCHCR1-211ENST00000467553 NUP54Q7Z3B4 507 aa12.88□□□□□ -0.35
CCHCR1-211ENST00000467553 CDH24Q86UP0 819 aa12.88□□□□□ -0.35
CCHCR1-211ENST00000467553 SLC44A2Q8IWA5 706 aaPredicted RBP12.88□□□□□ -0.35
CCHCR1-211ENST00000467553 FBXW8Q8N3Y1 598 aa12.88□□□□□ -0.35
CCHCR1-211ENST00000467553 TMEM251Q8N6I4 163 aa12.88□□□□□ -0.35
CCHCR1-211ENST00000467553 SPPL2AQ8TCT8 520 aa12.88□□□□□ -0.35
CCHCR1-211ENST00000467553 TMBIM1Q969X1 311 aa12.88□□□□□ -0.35
CCHCR1-211ENST00000467553 ARL8AQ96BM9 186 aa12.88□□□□□ -0.35
CCHCR1-211ENST00000467553 ELP4Q96EB1 424 aa12.88□□□□□ -0.35
CCHCR1-211ENST00000467553 DOHHQ9BU89 302 aa12.88□□□□□ -0.35
CCHCR1-211ENST00000467553 PNPOQ9NVS9 261 aa12.88□□□□□ -0.35
CCHCR1-211ENST00000467553 BOKQ9UMX3 212 aaPredicted RBP12.88□□□□□ -0.35
CCHCR1-211ENST00000467553 EIF3LQ9Y262 564 aaKnown RBP12.88□□□□□ -0.35
CCHCR1-211ENST00000467553 GPR55Q9Y2T6 319 aaPredicted RBP12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms