RNA–Protein interactions for RNA: ENST00000467533.5

HDAC3-203, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-203ENST00000467533 TRRAPQ9Y4A5 3859 aa9.12□□□□□ -0.95
HDAC3-203ENST00000467533 ALPK2Q86TB3 2170 aa9.12□□□□□ -0.95
HDAC3-203ENST00000467533 IGHV4-61A0A0C4DH41 118 aa9.11□□□□□ -0.95
HDAC3-203ENST00000467533 A0A1W2PS29 197 aa9.11□□□□□ -0.95
HDAC3-203ENST00000467533 H7C417 338 aa9.11□□□□□ -0.95
HDAC3-203ENST00000467533 ABCD4O14678 606 aa9.11□□□□□ -0.95
HDAC3-203ENST00000467533 RGS9O75916 674 aaPredicted RBP9.11□□□□□ -0.95
HDAC3-203ENST00000467533 MBD3O95983 291 aa9.11□□□□□ -0.95
HDAC3-203ENST00000467533 TGFB1P01137 390 aa9.11□□□□□ -0.95
HDAC3-203ENST00000467533 SLC35E2BP0CK96 405 aa9.11□□□□□ -0.95
HDAC3-203ENST00000467533 SLC35E2P0CK97 266 aa9.11□□□□□ -0.95
HDAC3-203ENST00000467533 PCNAP12004 261 aa9.11□□□□□ -0.95
HDAC3-203ENST00000467533 NT5EP21589 574 aa9.11□□□□□ -0.95
HDAC3-203ENST00000467533 GRK2P25098 689 aa9.11□□□□□ -0.95
HDAC3-203ENST00000467533 TTKP33981 857 aa9.11□□□□□ -0.95
HDAC3-203ENST00000467533 NR4A2P43354 598 aa9.11□□□□□ -0.95
HDAC3-203ENST00000467533 EIF1AXP47813 144 aaKnown RBP9.11□□□□□ -0.95
HDAC3-203ENST00000467533 SLC6A8P48029 635 aa9.11□□□□□ -0.95
HDAC3-203ENST00000467533 PDLIM4P50479 330 aa9.11□□□□□ -0.95
HDAC3-203ENST00000467533 EFNA4P52798 201 aa9.11□□□□□ -0.95
HDAC3-203ENST00000467533 CDKL1Q00532 357 aa9.11□□□□□ -0.95
HDAC3-203ENST00000467533 CARTPTQ16568 116 aa9.11□□□□□ -0.95
HDAC3-203ENST00000467533 HIST2H2ACQ16777 129 aaPredicted RBP9.11□□□□□ -0.95
HDAC3-203ENST00000467533 IQCCQ4KMZ1 466 aa9.11□□□□□ -0.95
HDAC3-203ENST00000467533 PAGE2BQ5JRK9 111 aa9.11□□□□□ -0.95
HDAC3-203ENST00000467533 HIST2H2AA3Q6FI13 130 aa9.11□□□□□ -0.95
HDAC3-203ENST00000467533 OR4C11Q6IEV9 310 aa9.11□□□□□ -0.95
HDAC3-203ENST00000467533 TREML4Q6UXN2 200 aa9.11□□□□□ -0.95
HDAC3-203ENST00000467533 RINLQ6ZS11 566 aa9.11□□□□□ -0.95
HDAC3-203ENST00000467533 FBXL14Q8N1E6 418 aa9.11□□□□□ -0.95
HDAC3-203ENST00000467533 MUC15Q8N387 334 aa9.11□□□□□ -0.95
HDAC3-203ENST00000467533 METTL25Q8N6Q8 603 aa9.11□□□□□ -0.95
HDAC3-203ENST00000467533 C2CD4AQ8NCU7 369 aaPredicted RBP9.11□□□□□ -0.95
HDAC3-203ENST00000467533 OR5M1Q8NGP8 315 aa9.11□□□□□ -0.95
HDAC3-203ENST00000467533 PIWIL2Q8TC59 973 aaKnown RBP9.11□□□□□ -0.95
HDAC3-203ENST00000467533 KCTD4Q8WVF5 259 aa9.11□□□□□ -0.95
HDAC3-203ENST00000467533 NXNL1Q96CM4 212 aa9.11□□□□□ -0.95
HDAC3-203ENST00000467533 BTBD9Q96Q07 612 aa9.11□□□□□ -0.95
HDAC3-203ENST00000467533 EFCAB11Q9BUY7 163 aa9.11□□□□□ -0.95
HDAC3-203ENST00000467533 HDHD5Q9BXW7 423 aa9.11□□□□□ -0.95
HDAC3-203ENST00000467533 EHD1Q9H4M9 534 aa9.11□□□□□ -0.95
HDAC3-203ENST00000467533 WDR41Q9HAD4 459 aa9.11□□□□□ -0.95
HDAC3-203ENST00000467533 FBXO34Q9NWN3 711 aa9.11□□□□□ -0.95
HDAC3-203ENST00000467533 TMEFF2Q9UIK5 374 aaPredicted RBP9.11□□□□□ -0.95
HDAC3-203ENST00000467533 POU2F3Q9UKI9 436 aa9.11□□□□□ -0.95
HDAC3-203ENST00000467533 ZNF337Q9Y3M9 751 aa9.11□□□□□ -0.95
HDAC3-203ENST00000467533 OARD1Q9Y530 152 aa9.11□□□□□ -0.95
HDAC3-203ENST00000467533 NBEAL2Q6ZNJ1 2754 aa9.1□□□□□ -0.95
HDAC3-203ENST00000467533 MAGEB16A2A368 324 aa9.1□□□□□ -0.95
HDAC3-203ENST00000467533 OR2M5A3KFT3 312 aa9.1□□□□□ -0.95
HDAC3-203ENST00000467533 NCF1BA6NI72 391 aaPredicted RBP9.1□□□□□ -0.95
HDAC3-203ENST00000467533 SDR42E2A6NKP2 422 aa9.1□□□□□ -0.95
HDAC3-203ENST00000467533 NCF1CA8MVU1 366 aaPredicted RBP9.1□□□□□ -0.95
HDAC3-203ENST00000467533 VWC2LB2RUY7 222 aa9.1□□□□□ -0.95
HDAC3-203ENST00000467533 AKR1B15C9JRZ8 316 aaPredicted RBP9.1□□□□□ -0.95
HDAC3-203ENST00000467533 ACOX3O15254 700 aa9.1□□□□□ -0.95
HDAC3-203ENST00000467533 CBFA2T2O43439 604 aa9.1□□□□□ -0.95
HDAC3-203ENST00000467533 TUBBP07437 444 aa9.1□□□□□ -0.95
HDAC3-203ENST00000467533 CCDC175P0C221 793 aa9.1□□□□□ -0.95
HDAC3-203ENST00000467533 NCF1P14598 390 aaPredicted RBP9.1□□□□□ -0.95
HDAC3-203ENST00000467533 CD22P20273 847 aa9.1□□□□□ -0.95
HDAC3-203ENST00000467533 IL11P20809 199 aa9.1□□□□□ -0.95
HDAC3-203ENST00000467533 PIK3R1P27986 724 aa9.1□□□□□ -0.95
HDAC3-203ENST00000467533 KIF5AQ12840 1032 aa9.1□□□□□ -0.95
HDAC3-203ENST00000467533 LAPTM5Q13571 262 aa9.1□□□□□ -0.95
HDAC3-203ENST00000467533 STK11Q15831 433 aa9.1□□□□□ -0.95
HDAC3-203ENST00000467533 KCTD19Q17RG1 926 aaPredicted RBP9.1□□□□□ -0.95
HDAC3-203ENST00000467533 AWAT1Q58HT5 328 aa9.1□□□□□ -0.95
HDAC3-203ENST00000467533 SFRP5Q5T4F7 317 aa9.1□□□□□ -0.95
HDAC3-203ENST00000467533 KHDRBS2Q5VWX1 349 aaKnown RBP9.1□□□□□ -0.95
HDAC3-203ENST00000467533 PIAS4Q8N2W9 510 aaPredicted RBP9.1□□□□□ -0.95
HDAC3-203ENST00000467533 OR7G1Q8NGA0 311 aa9.1□□□□□ -0.95
HDAC3-203ENST00000467533 ZNF473Q8WTR7 871 aaKnown RBP9.1□□□□□ -0.95
HDAC3-203ENST00000467533 FAM216AQ8WUB2 273 aa9.1□□□□□ -0.95
HDAC3-203ENST00000467533 KISS1RQ969F8 398 aaPredicted RBP9.1□□□□□ -0.95
HDAC3-203ENST00000467533 COL21A1Q96P44 957 aa9.1□□□□□ -0.95
HDAC3-203ENST00000467533 SOX7Q9BT81 388 aa9.1□□□□□ -0.95
HDAC3-203ENST00000467533 OR51B5Q9H339 312 aa9.1□□□□□ -0.95
HDAC3-203ENST00000467533 METTL17Q9H7H0 456 aaPredicted RBP9.1□□□□□ -0.95
HDAC3-203ENST00000467533 PPP4R1LQ9P1A2 415 aa9.1□□□□□ -0.95
HDAC3-203ENST00000467533 BCAP29Q9UHQ4 241 aa9.1□□□□□ -0.95
HDAC3-203ENST00000467533 CFL2Q9Y281 166 aa9.1□□□□□ -0.95
HDAC3-203ENST00000467533 PCDHGB1Q9Y5G3 927 aa9.1□□□□□ -0.95
HDAC3-203ENST00000467533 OR6C70A6NIJ9 312 aa9.09□□□□□ -0.95
HDAC3-203ENST00000467533 C17orf51A8MQB3 221 aa9.09□□□□□ -0.95
HDAC3-203ENST00000467533 B4DXG7 233 aa9.09□□□□□ -0.95
HDAC3-203ENST00000467533 TRIM77I1YAP6 450 aa9.09□□□□□ -0.95
HDAC3-203ENST00000467533 NDUFS8O00217 210 aa9.09□□□□□ -0.95
HDAC3-203ENST00000467533 EIF1AYO14602 144 aaKnown RBP9.09□□□□□ -0.95
HDAC3-203ENST00000467533 PRAMEF4O60810 478 aa9.09□□□□□ -0.95
HDAC3-203ENST00000467533 GCM2O75603 506 aaPredicted RBP9.09□□□□□ -0.95
HDAC3-203ENST00000467533 REM1O75628 298 aa9.09□□□□□ -0.95
HDAC3-203ENST00000467533 AGTR1P30556 359 aa9.09□□□□□ -0.95
HDAC3-203ENST00000467533 VPS41P49754 854 aa9.09□□□□□ -0.95
HDAC3-203ENST00000467533 FABP6P51161 128 aa9.09□□□□□ -0.95
HDAC3-203ENST00000467533 DDX39BQ13838 428 aaKnown RBP9.09□□□□□ -0.95
HDAC3-203ENST00000467533 P2RY6Q15077 328 aa9.09□□□□□ -0.95
HDAC3-203ENST00000467533 PRAMEF9Q5VWM5 478 aa9.09□□□□□ -0.95
HDAC3-203ENST00000467533 OR52E8Q6IFG1 317 aa9.09□□□□□ -0.95
HDAC3-203ENST00000467533 SHISA2Q6UWI4 295 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms