RNA–Protein interactions for RNA: ENST00000467263.1

SMC4-207, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 401 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-207ENST00000467263 PDLIM1O00151 329 aa2.87□□□□□ -1.95
SMC4-207ENST00000467263 HSF2BPO75031 334 aa2.87□□□□□ -1.95
SMC4-207ENST00000467263 APBB3O95704 486 aa2.87□□□□□ -1.95
SMC4-207ENST00000467263 CCDC166P0CW27 439 aa2.87□□□□□ -1.95
SMC4-207ENST00000467263 CYP11B1P15538 503 aa2.87□□□□□ -1.95
SMC4-207ENST00000467263 GNSP15586 552 aa2.87□□□□□ -1.95
SMC4-207ENST00000467263 IGHV1-2P23083 117 aa2.87□□□□□ -1.95
SMC4-207ENST00000467263 TMOD1P28289 359 aa2.87□□□□□ -1.95
SMC4-207ENST00000467263 RFC2P35250 354 aa2.87□□□□□ -1.95
SMC4-207ENST00000467263 HNRNPFP52597 415 aaKnown RBP2.87□□□□□ -1.95
SMC4-207ENST00000467263 CASP9P55211 416 aa2.87□□□□□ -1.95
SMC4-207ENST00000467263 RPS8P62241 208 aaKnown RBP2.87□□□□□ -1.95
SMC4-207ENST00000467263 NOP14P78316 857 aaKnown RBP2.87□□□□□ -1.95
SMC4-207ENST00000467263 IL18R1Q13478 541 aa2.87□□□□□ -1.95
SMC4-207ENST00000467263 CAPRIN1Q14444 709 aaKnown RBP2.87□□□□□ -1.95
SMC4-207ENST00000467263 CARTPTQ16568 116 aa2.87□□□□□ -1.95
SMC4-207ENST00000467263 ZNF699Q32M78 642 aa2.87□□□□□ -1.95
SMC4-207ENST00000467263 ZNF528Q3MIS6 628 aa2.87□□□□□ -1.95
SMC4-207ENST00000467263 GLYR1Q49A26 553 aaPredicted RBP2.87□□□□□ -1.95
SMC4-207ENST00000467263 PAGE2BQ5JRK9 111 aa2.87□□□□□ -1.95
SMC4-207ENST00000467263 LGSNQ5TDP6 509 aa2.87□□□□□ -1.95
SMC4-207ENST00000467263 LIPKQ5VXJ0 399 aa2.87□□□□□ -1.95
SMC4-207ENST00000467263 YRDCQ86U90 279 aaKnown RBP2.87□□□□□ -1.95
SMC4-207ENST00000467263 AMZ2Q86W34 360 aa2.87□□□□□ -1.95
SMC4-207ENST00000467263 CNTN4Q8IWV2 1026 aa2.87□□□□□ -1.95
SMC4-207ENST00000467263 COLGALT1Q8NBJ5 622 aa2.87□□□□□ -1.95
SMC4-207ENST00000467263 OR2L5Q8NG80 312 aa2.87□□□□□ -1.95
SMC4-207ENST00000467263 DLX4Q92988 240 aaPredicted RBP2.87□□□□□ -1.95
SMC4-207ENST00000467263 C11orf24Q96F05 449 aaPredicted RBP2.87□□□□□ -1.95
SMC4-207ENST00000467263 TM2D1Q9BX74 207 aa2.87□□□□□ -1.95
SMC4-207ENST00000467263 OPN3Q9H1Y3 402 aaPredicted RBP2.87□□□□□ -1.95
SMC4-207ENST00000467263 STARD5Q9NSY2 213 aa2.87□□□□□ -1.95
SMC4-207ENST00000467263 COMMD8Q9NX08 183 aa2.87□□□□□ -1.95
SMC4-207ENST00000467263 TMEM9Q9P0T7 183 aa2.87□□□□□ -1.95
SMC4-207ENST00000467263 APOBEC3BQ9UH17 382 aaKnown RBP2.87□□□□□ -1.95
SMC4-207ENST00000467263 CA5BQ9Y2D0 317 aa2.87□□□□□ -1.95
SMC4-207ENST00000467263 MTF2Q9Y483 593 aaPredicted RBP2.87□□□□□ -1.95
SMC4-207ENST00000467263 FKBP7Q9Y680 259 aa2.87□□□□□ -1.95
SMC4-207ENST00000467263 RAI1Q7Z5J4 1906 aaPredicted RBP2.87□□□□□ -1.95
SMC4-207ENST00000467263 RAD54L2Q9Y4B4 1467 aa2.86□□□□□ -1.95
SMC4-207ENST00000467263 ABHD2P08910 425 aa2.86□□□□□ -1.95
SMC4-207ENST00000467263 CPN1P15169 458 aa2.86□□□□□ -1.95
SMC4-207ENST00000467263 MGMTP16455 207 aa2.86□□□□□ -1.95
SMC4-207ENST00000467263 PTBP1P26599 531 aaKnown RBP eCLIP2.86□□□□□ -1.95
SMC4-207ENST00000467263 SRP54P61011 504 aaKnown RBP2.86□□□□□ -1.95
SMC4-207ENST00000467263 PUDPQ08623 228 aa2.86□□□□□ -1.95
SMC4-207ENST00000467263 RPA4Q13156 261 aa2.86□□□□□ -1.95
SMC4-207ENST00000467263 TSTA3Q13630 321 aaPredicted RBP2.86□□□□□ -1.95
SMC4-207ENST00000467263 LASP1Q14847 261 aaKnown RBP2.86□□□□□ -1.95
SMC4-207ENST00000467263 DCAF4L1Q3SXM0 396 aa2.86□□□□□ -1.95
SMC4-207ENST00000467263 CCDC184Q52MB2 194 aa2.86□□□□□ -1.95
SMC4-207ENST00000467263 HERC4Q5GLZ8 1057 aaPredicted RBP2.86□□□□□ -1.95
SMC4-207ENST00000467263 C1QTNF12Q5T7M4 302 aa2.86□□□□□ -1.95
SMC4-207ENST00000467263 PNCKQ6P2M8 343 aa2.86□□□□□ -1.95
SMC4-207ENST00000467263 DLEU7Q6UYE1 221 aa2.86□□□□□ -1.95
SMC4-207ENST00000467263 GPBP1Q86WP2 473 aa2.86□□□□□ -1.95
SMC4-207ENST00000467263 UNC45BQ8IWX7 931 aa2.86□□□□□ -1.95
SMC4-207ENST00000467263 CENPSQ8N2Z9 138 aa2.86□□□□□ -1.95
SMC4-207ENST00000467263 LEMD2Q8NC56 503 aa2.86□□□□□ -1.95
SMC4-207ENST00000467263 TMEM185AQ8NFB2 350 aa2.86□□□□□ -1.95
SMC4-207ENST00000467263 PHYHIPQ92561 330 aa2.86□□□□□ -1.95
SMC4-207ENST00000467263 FAM122AQ96E09 287 aa2.86□□□□□ -1.95
SMC4-207ENST00000467263 TSPAN18Q96SJ8 248 aa2.86□□□□□ -1.95
SMC4-207ENST00000467263 TSSK1BQ9BXA7 367 aa2.86□□□□□ -1.95
SMC4-207ENST00000467263 TEX13AQ9BXU3 409 aaPredicted RBP2.86□□□□□ -1.95
SMC4-207ENST00000467263 FAM124BQ9H5Z6 455 aaPredicted RBP2.86□□□□□ -1.95
SMC4-207ENST00000467263 ISG20L2Q9H9L3 353 aaKnown RBP2.86□□□□□ -1.95
SMC4-207ENST00000467263 MID1IP1Q9NPA3 183 aa2.86□□□□□ -1.95
SMC4-207ENST00000467263 PRMT8Q9NR22 394 aaPredicted RBP2.86□□□□□ -1.95
SMC4-207ENST00000467263 FAM114A2Q9NRY5 505 aa2.86□□□□□ -1.95
SMC4-207ENST00000467263 BARX2Q9UMQ3 279 aaPredicted RBP2.86□□□□□ -1.95
SMC4-207ENST00000467263 TEX264Q9Y6I9 313 aa2.86□□□□□ -1.95
SMC4-207ENST00000467263 TNRQ92752 1358 aa2.86□□□□□ -1.95
SMC4-207ENST00000467263 A0A0U1RRA0 63 aa2.85□□□□□ -1.95
SMC4-207ENST00000467263 TMEM89A2RUT3 159 aa2.85□□□□□ -1.95
SMC4-207ENST00000467263 VEGFDO43915 354 aa2.85□□□□□ -1.95
SMC4-207ENST00000467263 STK17BO94768 372 aa2.85□□□□□ -1.95
SMC4-207ENST00000467263 ACTL6AO96019 429 aa2.85□□□□□ -1.95
SMC4-207ENST00000467263 HSPB1P04792 205 aaKnown RBP2.85□□□□□ -1.95
SMC4-207ENST00000467263 PROS1P07225 676 aa2.85□□□□□ -1.95
SMC4-207ENST00000467263 SDC1P18827 310 aa2.85□□□□□ -1.95
SMC4-207ENST00000467263 OR3A4PP47883 348 aa2.85□□□□□ -1.95
SMC4-207ENST00000467263 NT5C2P49902 561 aa2.85□□□□□ -1.95
SMC4-207ENST00000467263 RIPK4P57078 832 aa2.85□□□□□ -1.95
SMC4-207ENST00000467263 ACTN3Q08043 901 aaPredicted RBP2.85□□□□□ -1.95
SMC4-207ENST00000467263 NME3Q13232 169 aa2.85□□□□□ -1.95
SMC4-207ENST00000467263 PEX5LQ8IYB4 626 aa2.85□□□□□ -1.95
SMC4-207ENST00000467263 CADM2Q8N3J6 435 aa2.85□□□□□ -1.95
SMC4-207ENST00000467263 LRRC17Q8N6Y2 441 aa2.85□□□□□ -1.95
SMC4-207ENST00000467263 ZNF397Q8NF99 534 aaPredicted RBP2.85□□□□□ -1.95
SMC4-207ENST00000467263 FRAT1Q92837 279 aaPredicted RBP2.85□□□□□ -1.95
SMC4-207ENST00000467263 SLC25A38Q96DW6 304 aa2.85□□□□□ -1.95
SMC4-207ENST00000467263 C16orf74Q96GX8 76 aa2.85□□□□□ -1.95
SMC4-207ENST00000467263 CABS1Q96KC9 395 aa2.85□□□□□ -1.95
SMC4-207ENST00000467263 TECTBQ96PL2 329 aa2.85□□□□□ -1.95
SMC4-207ENST00000467263 NAP1L3Q99457 506 aaPredicted RBP2.85□□□□□ -1.95
SMC4-207ENST00000467263 CBWD1Q9BRT8 395 aa2.85□□□□□ -1.95
SMC4-207ENST00000467263 DPH7Q9BTV6 452 aa2.85□□□□□ -1.95
SMC4-207ENST00000467263 NMUR2Q9GZQ4 415 aa2.85□□□□□ -1.95
SMC4-207ENST00000467263 DDX47Q9H0S4 455 aaKnown RBP2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms