RNA–Protein interactions for RNA: ENST00000466781.5

HPS4-209, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 6,136 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-209ENST00000466781 TMEM185BQ9H7F4 350 aa8.28□□□□□ -1.08
HPS4-209ENST00000466781 MBLAC1A4D2B0 266 aaPredicted RBP8.28□□□□□ -1.08
HPS4-209ENST00000466781 TVP23AA6NH52 213 aa8.28□□□□□ -1.08
HPS4-209ENST00000466781 SCAMP2O15127 329 aaKnown RBP8.28□□□□□ -1.08
HPS4-209ENST00000466781 GDF1P27539 372 aa8.28□□□□□ -1.08
HPS4-209ENST00000466781 HOXA11P31270 313 aaPredicted RBP8.28□□□□□ -1.08
HPS4-209ENST00000466781 FGL1Q08830 312 aa8.28□□□□□ -1.08
HPS4-209ENST00000466781 GPR139Q6DWJ6 353 aa8.28□□□□□ -1.08
HPS4-209ENST00000466781 GSG1LQ6UXU4 331 aa8.28□□□□□ -1.08
HPS4-209ENST00000466781 KRTCAP2Q8N6L1 136 aa8.28□□□□□ -1.08
HPS4-209ENST00000466781 OR6C4Q8NGE1 309 aa8.28□□□□□ -1.08
HPS4-209ENST00000466781 FAM210AQ96ND0 272 aa8.28□□□□□ -1.08
HPS4-209ENST00000466781 HAPLN2Q9GZV7 340 aa8.28□□□□□ -1.08
HPS4-209ENST00000466781 MAB21L2Q9Y586 359 aa8.28□□□□□ -1.08
HPS4-209ENST00000466781 TIAM2Q8IVF5 1701 aa8.28□□□□□ -1.08
HPS4-209ENST00000466781 PAPPAQ13219 1627 aa8.28□□□□□ -1.08
HPS4-209ENST00000466781 PLSCR5A0PG75 271 aa8.27□□□□□ -1.08
HPS4-209ENST00000466781 SLITRK5O94991 958 aa8.27□□□□□ -1.08
HPS4-209ENST00000466781 EPOP01588 193 aa8.27□□□□□ -1.08
HPS4-209ENST00000466781 IFNA4P05014 189 aa8.27□□□□□ -1.08
HPS4-209ENST00000466781 UCHL1P09936 223 aa8.27□□□□□ -1.08
HPS4-209ENST00000466781 AKR1C4P17516 323 aa8.27□□□□□ -1.08
HPS4-209ENST00000466781 ADH6P28332 368 aa8.27□□□□□ -1.08
HPS4-209ENST00000466781 CD97P48960 835 aa8.27□□□□□ -1.08
HPS4-209ENST00000466781 RRAS2P62070 204 aaPredicted RBP8.27□□□□□ -1.08
HPS4-209ENST00000466781 RING1Q06587 406 aa8.27□□□□□ -1.08
HPS4-209ENST00000466781 CCDC58Q4VC31 144 aa8.27□□□□□ -1.08
HPS4-209ENST00000466781 ZNF761Q86XN6 746 aaPredicted RBP8.27□□□□□ -1.08
HPS4-209ENST00000466781 OR56B2PQ8NGI1 322 aa8.27□□□□□ -1.08
HPS4-209ENST00000466781 ATOH1Q92858 354 aaPredicted RBP8.27□□□□□ -1.08
HPS4-209ENST00000466781 HHIPQ96QV1 700 aa8.27□□□□□ -1.08
HPS4-209ENST00000466781 SYT3Q9BQG1 590 aa8.27□□□□□ -1.08
HPS4-209ENST00000466781 DUSP23Q9BVJ7 150 aa8.27□□□□□ -1.08
HPS4-209ENST00000466781 GDE1Q9NZC3 331 aa8.27□□□□□ -1.08
HPS4-209ENST00000466781 TNRC6CQ9HCJ0 1690 aaKnown RBP8.27□□□□□ -1.08
HPS4-209ENST00000466781 A0A1W2PPW3 197 aa8.27□□□□□ -1.09
HPS4-209ENST00000466781 CD8B2A6NJW9 211 aa8.27□□□□□ -1.09
HPS4-209ENST00000466781 MEIS3P2A8K0S8 358 aa8.27□□□□□ -1.09
HPS4-209ENST00000466781 SYT7O43581 403 aa8.27□□□□□ -1.09
HPS4-209ENST00000466781 LCATP04180 440 aa8.27□□□□□ -1.09
HPS4-209ENST00000466781 CD8BP10966 210 aa8.27□□□□□ -1.09
HPS4-209ENST00000466781 BMP4P12644 408 aa8.27□□□□□ -1.09
HPS4-209ENST00000466781 EPHA1P21709 976 aa8.27□□□□□ -1.09
HPS4-209ENST00000466781 SFTPDP35247 375 aa8.27□□□□□ -1.09
HPS4-209ENST00000466781 ACVR1BP36896 505 aa8.27□□□□□ -1.09
HPS4-209ENST00000466781 GPR4P46093 362 aa8.27□□□□□ -1.09
HPS4-209ENST00000466781 SERTAD2Q14140 314 aa8.27□□□□□ -1.09
HPS4-209ENST00000466781 GRIN2CQ14957 1233 aa8.27□□□□□ -1.09
HPS4-209ENST00000466781 COL28A1Q2UY09 1125 aa8.27□□□□□ -1.09
HPS4-209ENST00000466781 DEFB133Q30KQ1 61 aa8.27□□□□□ -1.09
HPS4-209ENST00000466781 DEFB110Q30KQ9 67 aa8.27□□□□□ -1.09
HPS4-209ENST00000466781 ZNF404Q494X3 552 aa8.27□□□□□ -1.09
HPS4-209ENST00000466781 PDSS2Q86YH6 399 aa8.27□□□□□ -1.09
HPS4-209ENST00000466781 OR4N5Q8IXE1 308 aa8.27□□□□□ -1.09
HPS4-209ENST00000466781 DEFB123Q8N688 67 aa8.27□□□□□ -1.09
HPS4-209ENST00000466781 KLHDC9Q8NEP7 349 aa8.27□□□□□ -1.09
HPS4-209ENST00000466781 OR2T4Q8NH00 348 aa8.27□□□□□ -1.09
HPS4-209ENST00000466781 POTEKPQ9BYX7 375 aa8.27□□□□□ -1.09
HPS4-209ENST00000466781 PELI2Q9HAT8 420 aa8.27□□□□□ -1.09
HPS4-209ENST00000466781 HIF1ANQ9NWT6 349 aa8.27□□□□□ -1.09
HPS4-209ENST00000466781 CARD8Q9Y2G2 431 aa8.27□□□□□ -1.09
HPS4-209ENST00000466781 ST14Q9Y5Y6 855 aa8.27□□□□□ -1.09
HPS4-209ENST00000466781 M0QZQ0 153 aa8.27□□□□□ -1.09
HPS4-209ENST00000466781 M0R233 179 aa8.27□□□□□ -1.09
HPS4-209ENST00000466781 S100A7P31151 101 aa8.27□□□□□ -1.09
HPS4-209ENST00000466781 TAP2Q03519 686 aa8.27□□□□□ -1.09
HPS4-209ENST00000466781 EIF2B1Q14232 305 aaKnown RBP8.27□□□□□ -1.09
HPS4-209ENST00000466781 RABL3Q5HYI8 236 aa8.27□□□□□ -1.09
HPS4-209ENST00000466781 PTCRAQ6ISU1 281 aaPredicted RBP8.27□□□□□ -1.09
HPS4-209ENST00000466781 TMEM205Q6UW68 189 aa8.27□□□□□ -1.09
HPS4-209ENST00000466781 TIFABQ6ZNK6 161 aa8.27□□□□□ -1.09
HPS4-209ENST00000466781 SHFQ7M4L6 423 aa8.27□□□□□ -1.09
HPS4-209ENST00000466781 SSX3Q99909 188 aa8.27□□□□□ -1.09
HPS4-209ENST00000466781 OR51B6Q9H340 312 aa8.27□□□□□ -1.09
HPS4-209ENST00000466781 TMEM100Q9NV29 134 aa8.27□□□□□ -1.09
HPS4-209ENST00000466781 CKMT1AP12532 417 aa8.27□□□□□ -1.09
HPS4-209ENST00000466781 CD1DP15813 335 aa8.27□□□□□ -1.09
HPS4-209ENST00000466781 FOXN2P32314 431 aa8.27□□□□□ -1.09
HPS4-209ENST00000466781 SLC6A8P48029 635 aa8.27□□□□□ -1.09
HPS4-209ENST00000466781 NTHL1P78549 312 aa8.27□□□□□ -1.09
HPS4-209ENST00000466781 APOFQ13790 326 aa8.27□□□□□ -1.09
HPS4-209ENST00000466781 PCLAFQ15004 111 aa8.27□□□□□ -1.09
HPS4-209ENST00000466781 PTPRRQ15256 657 aa8.27□□□□□ -1.09
HPS4-209ENST00000466781 PRAMEF8Q5VWM4 474 aa8.27□□□□□ -1.09
HPS4-209ENST00000466781 PRAMEF7Q5VXH5 474 aa8.27□□□□□ -1.09
HPS4-209ENST00000466781 LIPKQ5VXJ0 399 aa8.27□□□□□ -1.09
HPS4-209ENST00000466781 KIAA0907Q7Z7F0 614 aaPredicted RBP8.27□□□□□ -1.09
HPS4-209ENST00000466781 TMEM173Q86WV6 379 aaPredicted RBP8.27□□□□□ -1.09
HPS4-209ENST00000466781 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.27□□□□□ -1.09
HPS4-209ENST00000466781 PIAS4Q8N2W9 510 aaPredicted RBP8.27□□□□□ -1.09
HPS4-209ENST00000466781 PAPD5Q8NDF8 572 aaKnown RBP8.27□□□□□ -1.09
HPS4-209ENST00000466781 OR9I1Q8NGQ6 314 aa8.27□□□□□ -1.09
HPS4-209ENST00000466781 SORCS1Q8WY21 1168 aa8.27□□□□□ -1.09
HPS4-209ENST00000466781 RANBP9Q96S59 729 aa8.27□□□□□ -1.09
HPS4-209ENST00000466781 ZFYVE21Q9BQ24 234 aa8.27□□□□□ -1.09
HPS4-209ENST00000466781 ZNF160Q9HCG1 818 aa8.27□□□□□ -1.09
HPS4-209ENST00000466781 FAM72CH0Y354 149 aa8.27□□□□□ -1.09
HPS4-209ENST00000466781 POLR1CO15160 346 aaPredicted RBP8.27□□□□□ -1.09
HPS4-209ENST00000466781 PITPNBP48739 271 aa8.27□□□□□ -1.09
HPS4-209ENST00000466781 NKX3-2P78367 333 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms