RNA–Protein interactions for RNA: ENST00000466415.1

VPS16-206, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS16, Length 708 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-206ENST00000466415 ZNF721Q8TF20 911 aa11.28□□□□□ -0.6
VPS16-206ENST00000466415 CANT1Q8WVQ1 401 aa11.28□□□□□ -0.6
VPS16-206ENST00000466415 PIK3R3Q92569 461 aa11.28□□□□□ -0.6
VPS16-206ENST00000466415 SLC35A4Q96G79 324 aa11.28□□□□□ -0.6
VPS16-206ENST00000466415 TPD52L3Q96J77 140 aa11.28□□□□□ -0.6
VPS16-206ENST00000466415 VPS50Q96JG6 964 aa11.28□□□□□ -0.6
VPS16-206ENST00000466415 VSTM2LQ96N03 204 aa11.28□□□□□ -0.6
VPS16-206ENST00000466415 TRNT1Q96Q11 434 aaKnown RBP11.28□□□□□ -0.6
VPS16-206ENST00000466415 GAL3ST4Q96RP7 486 aa11.28□□□□□ -0.6
VPS16-206ENST00000466415 SEPHS2Q99611 448 aa11.28□□□□□ -0.6
VPS16-206ENST00000466415 SPATA5L1Q9BVQ7 753 aa11.28□□□□□ -0.6
VPS16-206ENST00000466415 BTBD2Q9BX70 525 aa11.28□□□□□ -0.6
VPS16-206ENST00000466415 ITPAQ9BY32 194 aa11.28□□□□□ -0.6
VPS16-206ENST00000466415 YY1AP1Q9H869 796 aa11.28□□□□□ -0.6
VPS16-206ENST00000466415 AP4S1Q9Y587 144 aa11.28□□□□□ -0.6
VPS16-206ENST00000466415 KCNE3Q9Y6H6 103 aa11.28□□□□□ -0.6
VPS16-206ENST00000466415 FRYLO94915 3013 aa11.27□□□□□ -0.6
VPS16-206ENST00000466415 MUC6Q6W4X9 2439 aa11.27□□□□□ -0.6
VPS16-206ENST00000466415 A0A0G2JPF8 293 aa11.27□□□□□ -0.61
VPS16-206ENST00000466415 HNRNPCL2B2RXH8 293 aa11.27□□□□□ -0.61
VPS16-206ENST00000466415 HNRNPCL3B7ZW38 293 aa11.27□□□□□ -0.61
VPS16-206ENST00000466415 C21orf140B9A014 251 aa11.27□□□□□ -0.61
VPS16-206ENST00000466415 PRKD3O94806 890 aa11.27□□□□□ -0.61
VPS16-206ENST00000466415 H6PDO95479 791 aa11.27□□□□□ -0.61
VPS16-206ENST00000466415 CLPSP04118 112 aa11.27□□□□□ -0.61
VPS16-206ENST00000466415 ALPPP05187 535 aa11.27□□□□□ -0.61
VPS16-206ENST00000466415 UMODP07911 640 aa11.27□□□□□ -0.61
VPS16-206ENST00000466415 CHRM4P08173 479 aa11.27□□□□□ -0.61
VPS16-206ENST00000466415 HNRNPCL4P0DMR1 293 aa11.27□□□□□ -0.61
VPS16-206ENST00000466415 FCGR1AP12314 374 aa11.27□□□□□ -0.61
VPS16-206ENST00000466415 HOXB6P17509 224 aaKnown RBP11.27□□□□□ -0.61
VPS16-206ENST00000466415 ATP6V1C1P21283 382 aa11.27□□□□□ -0.61
VPS16-206ENST00000466415 TRHRP34981 398 aaPredicted RBP11.27□□□□□ -0.61
VPS16-206ENST00000466415 DLSTP36957 453 aa11.27□□□□□ -0.61
VPS16-206ENST00000466415 STAT5AP42229 794 aa11.27□□□□□ -0.61
VPS16-206ENST00000466415 RFX3P48380 749 aa11.27□□□□□ -0.61
VPS16-206ENST00000466415 SLC37A1P57057 533 aa11.27□□□□□ -0.61
VPS16-206ENST00000466415 PCBP3P57721 371 aaKnown RBP11.27□□□□□ -0.61
VPS16-206ENST00000466415 SESN3P58005 492 aa11.27□□□□□ -0.61
VPS16-206ENST00000466415 DCAF7P61962 342 aa11.27□□□□□ -0.61
VPS16-206ENST00000466415 FUT5Q11128 374 aa11.27□□□□□ -0.61
VPS16-206ENST00000466415 NNATQ16517 81 aa11.27□□□□□ -0.61
VPS16-206ENST00000466415 ARHGAP11BQ3KRB8 267 aa11.27□□□□□ -0.61
VPS16-206ENST00000466415 CRB2Q5IJ48 1285 aa11.27□□□□□ -0.61
VPS16-206ENST00000466415 HEPHL1Q6MZM0 1159 aa11.27□□□□□ -0.61
VPS16-206ENST00000466415 LRRC74BQ6ZQY2 392 aa11.27□□□□□ -0.61
VPS16-206ENST00000466415 FKBP9P1Q75LS8 142 aa11.27□□□□□ -0.61
VPS16-206ENST00000466415 ARMC8Q8IUR7 673 aa11.27□□□□□ -0.61
VPS16-206ENST00000466415 ZNF321PQ8N8H1 164 aa11.27□□□□□ -0.61
VPS16-206ENST00000466415 ZNF615Q8N8J6 731 aa11.27□□□□□ -0.61
VPS16-206ENST00000466415 CHDHQ8NE62 594 aaPredicted RBP11.27□□□□□ -0.61
VPS16-206ENST00000466415 B3GNT7Q8NFL0 401 aa11.27□□□□□ -0.61
VPS16-206ENST00000466415 RASSF5Q8WWW0 418 aa11.27□□□□□ -0.61
VPS16-206ENST00000466415 C8orf44Q96CB5 159 aa11.27□□□□□ -0.61
VPS16-206ENST00000466415 DUS3LQ96G46 650 aaKnown RBP11.27□□□□□ -0.61
VPS16-206ENST00000466415 RMND5BQ96G75 393 aaPredicted RBP11.27□□□□□ -0.61
VPS16-206ENST00000466415 VMP1Q96GC9 406 aa11.27□□□□□ -0.61
VPS16-206ENST00000466415 PYURFQ96I23 114 aa11.27□□□□□ -0.61
VPS16-206ENST00000466415 HSH2DQ96JZ2 352 aa11.27□□□□□ -0.61
VPS16-206ENST00000466415 COL21A1Q96P44 957 aa11.27□□□□□ -0.61
VPS16-206ENST00000466415 TREX2Q9BQ50 279 aaPredicted RBP11.27□□□□□ -0.61
VPS16-206ENST00000466415 NUDT9Q9BW91 350 aa11.27□□□□□ -0.61
VPS16-206ENST00000466415 RASSF4Q9H2L5 321 aa11.27□□□□□ -0.61
VPS16-206ENST00000466415 MAGIXQ9H6Y5 334 aa11.27□□□□□ -0.61
VPS16-206ENST00000466415 BCL2L10Q9HD36 194 aa11.27□□□□□ -0.61
VPS16-206ENST00000466415 CCM2LQ9NUG4 571 aaPredicted RBP11.27□□□□□ -0.61
VPS16-206ENST00000466415 WDR70Q9NW82 654 aa11.27□□□□□ -0.61
VPS16-206ENST00000466415 DLL3Q9NYJ7 618 aa11.27□□□□□ -0.61
VPS16-206ENST00000466415 SEC14L3Q9UDX4 400 aa11.27□□□□□ -0.61
VPS16-206ENST00000466415 SLC13A4Q9UKG4 626 aa11.27□□□□□ -0.61
VPS16-206ENST00000466415 FARSAQ9Y285 508 aaKnown RBP11.27□□□□□ -0.61
VPS16-206ENST00000466415 DTX4Q9Y2E6 619 aa11.27□□□□□ -0.61
VPS16-206ENST00000466415 WDR45Q9Y484 360 aa11.27□□□□□ -0.61
VPS16-206ENST00000466415 SCN2AQ99250 2005 aa11.26□□□□□ -0.61
VPS16-206ENST00000466415 FER1L5A0AVI2 2057 aa11.26□□□□□ -0.61
VPS16-206ENST00000466415 C2orf92A0A1B0GVN3 265 aa11.26□□□□□ -0.61
VPS16-206ENST00000466415 GXYLT2A0PJZ3 443 aa11.26□□□□□ -0.61
VPS16-206ENST00000466415 PRAMEF27A3QJZ7 478 aa11.26□□□□□ -0.61
VPS16-206ENST00000466415 FRG2CA6NGY1 282 aa11.26□□□□□ -0.61
VPS16-206ENST00000466415 M0QX08 132 aa11.26□□□□□ -0.61
VPS16-206ENST00000466415 HNRNPRO43390 633 aaKnown RBP11.26□□□□□ -0.61
VPS16-206ENST00000466415 TPST1O60507 370 aa11.26□□□□□ -0.61
VPS16-206ENST00000466415 STX11O75558 287 aa11.26□□□□□ -0.61
VPS16-206ENST00000466415 KLF7O75840 302 aaPredicted RBP11.26□□□□□ -0.61
VPS16-206ENST00000466415 IGKV3-11P04433 115 aa11.26□□□□□ -0.61
VPS16-206ENST00000466415 RAP2AP10114 183 aa11.26□□□□□ -0.61
VPS16-206ENST00000466415 ETS2P15036 469 aa11.26□□□□□ -0.61
VPS16-206ENST00000466415 ANPEPP15144 967 aa11.26□□□□□ -0.61
VPS16-206ENST00000466415 OTX2P32243 289 aa11.26□□□□□ -0.61
VPS16-206ENST00000466415 SLC26A5P58743 744 aa11.26□□□□□ -0.61
VPS16-206ENST00000466415 EXOSC6Q5RKV6 272 aaKnown RBP11.26□□□□□ -0.61
VPS16-206ENST00000466415 FAM69BQ5VUD6 431 aa11.26□□□□□ -0.61
VPS16-206ENST00000466415 IRAK1BP1Q5VVH5 260 aa11.26□□□□□ -0.61
VPS16-206ENST00000466415 FIGNL1Q6PIW4 674 aa11.26□□□□□ -0.61
VPS16-206ENST00000466415 ENPP6Q6UWR7 440 aa11.26□□□□□ -0.61
VPS16-206ENST00000466415 NPSR1Q6W5P4 371 aa11.26□□□□□ -0.61
VPS16-206ENST00000466415 IL22RA1Q8N6P7 574 aa11.26□□□□□ -0.61
VPS16-206ENST00000466415 SPPL2AQ8TCT8 520 aa11.26□□□□□ -0.61
VPS16-206ENST00000466415 KIAA1143Q96AT1 154 aaPredicted RBP11.26□□□□□ -0.61
VPS16-206ENST00000466415 TAMM41Q96BW9 452 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms