RNA–Protein interactions for RNA: ENST00000466054.1

LRCH3-211, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 2

Gene LRCH3, Length 683 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-211ENST00000466054 E9PMD0 336 aa3.21□□□□□ -1.9
LRCH3-211ENST00000466054 C11orf98E9PRG8 122 aa3.21□□□□□ -1.9
LRCH3-211ENST00000466054 SGK494L7N484 410 aa3.21□□□□□ -1.9
LRCH3-211ENST00000466054 NDUFA7O95182 113 aa3.21□□□□□ -1.9
LRCH3-211ENST00000466054 GJB5O95377 273 aa3.21□□□□□ -1.9
LRCH3-211ENST00000466054 MT-ATP6P00846 226 aa3.21□□□□□ -1.9
LRCH3-211ENST00000466054 WNT2P09544 360 aa3.21□□□□□ -1.9
LRCH3-211ENST00000466054 SLC35G4P0C7Q5 338 aa3.21□□□□□ -1.9
LRCH3-211ENST00000466054 UMPSP11172 480 aa3.21□□□□□ -1.9
LRCH3-211ENST00000466054 ETS1P14921 441 aa3.21□□□□□ -1.9
LRCH3-211ENST00000466054 PTPN4P29074 926 aa3.21□□□□□ -1.9
LRCH3-211ENST00000466054 PTPN6P29350 595 aa3.21□□□□□ -1.9
LRCH3-211ENST00000466054 AKT2P31751 481 aa3.21□□□□□ -1.9
LRCH3-211ENST00000466054 HMGCLP35914 325 aa3.21□□□□□ -1.9
LRCH3-211ENST00000466054 ASMTP46597 345 aa3.21□□□□□ -1.9
LRCH3-211ENST00000466054 IST1P53990 364 aa3.21□□□□□ -1.9
LRCH3-211ENST00000466054 EIF2B1Q14232 305 aaKnown RBP3.21□□□□□ -1.9
LRCH3-211ENST00000466054 PDIA5Q14554 519 aa3.21□□□□□ -1.9
LRCH3-211ENST00000466054 ZKSCAN8Q15776 578 aaPredicted RBP3.21□□□□□ -1.9
LRCH3-211ENST00000466054 ZIC1Q15915 447 aa3.21□□□□□ -1.9
LRCH3-211ENST00000466054 PKN2Q16513 984 aaKnown RBP3.21□□□□□ -1.9
LRCH3-211ENST00000466054 TOR1AIP1Q5JTV8 583 aa3.21□□□□□ -1.9
LRCH3-211ENST00000466054 GCNT7Q6ZNI0 430 aa3.21□□□□□ -1.9
LRCH3-211ENST00000466054 P4HA3Q7Z4N8 544 aa3.21□□□□□ -1.9
LRCH3-211ENST00000466054 ZNF619Q8N2I2 560 aa3.21□□□□□ -1.9
LRCH3-211ENST00000466054 CENPSQ8N2Z9 138 aa3.21□□□□□ -1.9
LRCH3-211ENST00000466054 KLHL30-AS1Q8NEE0 82 aa3.21□□□□□ -1.9
LRCH3-211ENST00000466054 FAM71CQ8NEG0 241 aa3.21□□□□□ -1.9
LRCH3-211ENST00000466054 NCLNQ969V3 563 aa3.21□□□□□ -1.9
LRCH3-211ENST00000466054 TMEM237Q96Q45 408 aa3.21□□□□□ -1.9
LRCH3-211ENST00000466054 RANBP9Q96S59 729 aa3.21□□□□□ -1.9
LRCH3-211ENST00000466054 TMEM231Q9H6L2 316 aa3.21□□□□□ -1.9
LRCH3-211ENST00000466054 IL20RAQ9UHF4 553 aa3.21□□□□□ -1.9
LRCH3-211ENST00000466054 PLA2G4CQ9UP65 541 aa3.21□□□□□ -1.9
LRCH3-211ENST00000466054 GRIN2DO15399 1336 aa3.2□□□□□ -1.9
LRCH3-211ENST00000466054 A0A1W2PQ72 361 aa3.2□□□□□ -1.9
LRCH3-211ENST00000466054 FBLL1A6NHQ2 334 aaKnown RBP3.2□□□□□ -1.9
LRCH3-211ENST00000466054 H3BTX0 84 aa3.2□□□□□ -1.9
LRCH3-211ENST00000466054 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP3.2□□□□□ -1.9
LRCH3-211ENST00000466054 SAP18O00422 153 aaKnown RBP3.2□□□□□ -1.9
LRCH3-211ENST00000466054 PGAM2P15259 253 aa3.2□□□□□ -1.9
LRCH3-211ENST00000466054 PRDX6P30041 224 aa3.2□□□□□ -1.9
LRCH3-211ENST00000466054 PRDX2P32119 198 aa3.2□□□□□ -1.9
LRCH3-211ENST00000466054 MAGEA9P43362 315 aa3.2□□□□□ -1.9
LRCH3-211ENST00000466054 STK19P49842 368 aaPredicted RBP3.2□□□□□ -1.9
LRCH3-211ENST00000466054 ARHGDIBP52566 201 aa3.2□□□□□ -1.9
LRCH3-211ENST00000466054 ATXN3P54252 364 aaPredicted RBP3.2□□□□□ -1.9
LRCH3-211ENST00000466054 RAG2P55895 527 aa3.2□□□□□ -1.9
LRCH3-211ENST00000466054 PAX2Q02962 417 aa3.2□□□□□ -1.9
LRCH3-211ENST00000466054 MARC1Q5VT66 337 aa3.2□□□□□ -1.9
LRCH3-211ENST00000466054 PAMR1Q6UXH9 720 aa3.2□□□□□ -1.9
LRCH3-211ENST00000466054 RBM43Q6ZSC3 357 aaKnown RBP3.2□□□□□ -1.9
LRCH3-211ENST00000466054 NET1Q7Z628 596 aaPredicted RBP3.2□□□□□ -1.9
LRCH3-211ENST00000466054 ARFGAP2Q8N6H7 521 aa3.2□□□□□ -1.9
LRCH3-211ENST00000466054 OR4F17Q8NGA8 305 aa3.2□□□□□ -1.9
LRCH3-211ENST00000466054 OR56B1Q8NGI3 324 aa3.2□□□□□ -1.9
LRCH3-211ENST00000466054 RFESDQ8TAC1 157 aa3.2□□□□□ -1.9
LRCH3-211ENST00000466054 ZNF671Q8TAW3 534 aa3.2□□□□□ -1.9
LRCH3-211ENST00000466054 MRAPQ8TCY5 172 aa3.2□□□□□ -1.9
LRCH3-211ENST00000466054 SLC25A36Q96CQ1 311 aa3.2□□□□□ -1.9
LRCH3-211ENST00000466054 C11orf24Q96F05 449 aaPredicted RBP3.2□□□□□ -1.9
LRCH3-211ENST00000466054 PPP1R16AQ96I34 528 aa3.2□□□□□ -1.9
LRCH3-211ENST00000466054 SIGLEC12Q96PQ1 595 aa3.2□□□□□ -1.9
LRCH3-211ENST00000466054 OR4F4Q96R69 305 aa3.2□□□□□ -1.9
LRCH3-211ENST00000466054 CARD6Q9BX69 1037 aa3.2□□□□□ -1.9
LRCH3-211ENST00000466054 FAM114A2Q9NRY5 505 aa3.2□□□□□ -1.9
LRCH3-211ENST00000466054 DCAF13Q9NV06 445 aaKnown RBP3.2□□□□□ -1.9
LRCH3-211ENST00000466054 KLRF1Q9NZS2 232 aa3.2□□□□□ -1.9
LRCH3-211ENST00000466054 ABCD2Q9UBJ2 740 aa3.2□□□□□ -1.9
LRCH3-211ENST00000466054 CLIP2Q9UDT6 1046 aa3.2□□□□□ -1.9
LRCH3-211ENST00000466054 RSPH14Q9UHP6 348 aa3.2□□□□□ -1.9
LRCH3-211ENST00000466054 CCT8L1PA6NM43 557 aa3.19□□□□□ -1.9
LRCH3-211ENST00000466054 EFCAB7A8K855 629 aa3.19□□□□□ -1.9
LRCH3-211ENST00000466054 RASGRF2O14827 1237 aa3.19□□□□□ -1.9
LRCH3-211ENST00000466054 ADAM12O43184 909 aa3.19□□□□□ -1.9
LRCH3-211ENST00000466054 LCMT2O60294 686 aaKnown RBP3.19□□□□□ -1.9
LRCH3-211ENST00000466054 RAMP1O60894 148 aa3.19□□□□□ -1.9
LRCH3-211ENST00000466054 IGKV3-15P01624 115 aa3.19□□□□□ -1.9
LRCH3-211ENST00000466054 CT45A10P0DMU9 189 aa3.19□□□□□ -1.9
LRCH3-211ENST00000466054 LAMP1P11279 417 aa3.19□□□□□ -1.9
LRCH3-211ENST00000466054 RFC2P35250 354 aa3.19□□□□□ -1.9
LRCH3-211ENST00000466054 MRPS6P82932 125 aaKnown RBP3.19□□□□□ -1.9
LRCH3-211ENST00000466054 SRYQ05066 204 aa3.19□□□□□ -1.9
LRCH3-211ENST00000466054 GABPB1Q06547 395 aaPredicted RBP3.19□□□□□ -1.9
LRCH3-211ENST00000466054 ZP4Q12836 540 aa3.19□□□□□ -1.9
LRCH3-211ENST00000466054 SLC10A1Q14973 349 aa3.19□□□□□ -1.9
LRCH3-211ENST00000466054 PARP10Q53GL7 1025 aa3.19□□□□□ -1.9
LRCH3-211ENST00000466054 CYBRD1Q53TN4 286 aa3.19□□□□□ -1.9
LRCH3-211ENST00000466054 RSBN1Q5VWQ0 802 aaPredicted RBP3.19□□□□□ -1.9
LRCH3-211ENST00000466054 CGB2Q6NT52 195 aa3.19□□□□□ -1.9
LRCH3-211ENST00000466054 CNSTQ6PJW8 725 aa3.19□□□□□ -1.9
LRCH3-211ENST00000466054 C2orf66Q6UXQ4 117 aa3.19□□□□□ -1.9
LRCH3-211ENST00000466054 TMEM26Q6ZUK4 368 aa3.19□□□□□ -1.9
LRCH3-211ENST00000466054 NAXDQ8IW45 347 aa3.19□□□□□ -1.9
LRCH3-211ENST00000466054 MINDY2Q8NBR6 621 aa3.19□□□□□ -1.9
LRCH3-211ENST00000466054 CCT8L2Q96SF2 557 aa3.19□□□□□ -1.9
LRCH3-211ENST00000466054 C1orf21Q9H246 121 aa3.19□□□□□ -1.9
LRCH3-211ENST00000466054 RPAP3Q9H6T3 665 aaPredicted RBP3.19□□□□□ -1.9
LRCH3-211ENST00000466054 TNFRSF19Q9NS68 423 aa3.19□□□□□ -1.9
LRCH3-211ENST00000466054 NINJ2Q9NZG7 142 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms