RNA–Protein interactions for RNA: ENST00000465727.5

SDF4-205, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,095 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-205ENST00000465727 VASNQ6EMK4 673 aa18.58■□□□□ 0.56
SDF4-205ENST00000465727 TMEM91Q6ZNR0 172 aa18.58■□□□□ 0.56
SDF4-205ENST00000465727 SHFQ7M4L6 423 aa18.58■□□□□ 0.56
SDF4-205ENST00000465727 TAS1R1Q7RTX1 841 aa18.58■□□□□ 0.56
SDF4-205ENST00000465727 C16orf62Q7Z3J2 963 aa18.58■□□□□ 0.56
SDF4-205ENST00000465727 FGD2Q7Z6J4 655 aa18.58■□□□□ 0.56
SDF4-205ENST00000465727 TRAM1L1Q8N609 369 aa18.58■□□□□ 0.56
SDF4-205ENST00000465727 FIBINQ8TAL6 211 aa18.58■□□□□ 0.56
SDF4-205ENST00000465727 SMPDL3AQ92484 453 aa18.58■□□□□ 0.56
SDF4-205ENST00000465727 NR4A3Q92570 626 aa18.58■□□□□ 0.56
SDF4-205ENST00000465727 FOXJ1Q92949 421 aa18.58■□□□□ 0.56
SDF4-205ENST00000465727 DPCDQ9BVM2 203 aaPredicted RBP18.58■□□□□ 0.56
SDF4-205ENST00000465727 EGLN3Q9H6Z9 239 aa18.58■□□□□ 0.56
SDF4-205ENST00000465727 ERVMER34-1Q9H9K5 563 aa18.58■□□□□ 0.56
SDF4-205ENST00000465727 SLAMF7Q9NQ25 335 aa18.58■□□□□ 0.56
SDF4-205ENST00000465727 MED17Q9NVC6 651 aa18.58■□□□□ 0.56
SDF4-205ENST00000465727 NFKBIL1Q9UBC1 381 aaPredicted RBP18.58■□□□□ 0.56
SDF4-205ENST00000465727 CKAP5Q14008 2032 aa18.57■□□□□ 0.56
SDF4-205ENST00000465727 TRAV6A0A075B6T7 132 aa18.57■□□□□ 0.56
SDF4-205ENST00000465727 MEIKINA0A087WXM9 373 aa18.57■□□□□ 0.56
SDF4-205ENST00000465727 C2orf92A0A1B0GVN3 265 aa18.57■□□□□ 0.56
SDF4-205ENST00000465727 FAM170BA6NMN3 283 aa18.57■□□□□ 0.56
SDF4-205ENST00000465727 M0R3H8 397 aa18.57■□□□□ 0.56
SDF4-205ENST00000465727 HRO43593 1189 aa18.57■□□□□ 0.56
SDF4-205ENST00000465727 POP4O95707 220 aaKnown RBP18.57■□□□□ 0.56
SDF4-205ENST00000465727 OR1D2P34982 312 aa18.57■□□□□ 0.56
SDF4-205ENST00000465727 MMP12P39900 470 aa18.57■□□□□ 0.56
SDF4-205ENST00000465727 RNF144AP50876 292 aaPredicted RBP18.57■□□□□ 0.56
SDF4-205ENST00000465727 ZNF81P51508 661 aa18.57■□□□□ 0.56
SDF4-205ENST00000465727 KCNA10Q16322 511 aa18.57■□□□□ 0.56
SDF4-205ENST00000465727 LGALSLQ3ZCW2 172 aaPredicted RBP18.57■□□□□ 0.56
SDF4-205ENST00000465727 NXPE4Q6UWF7 544 aa18.57■□□□□ 0.56
SDF4-205ENST00000465727 RTL4Q6ZR62 310 aa18.57■□□□□ 0.56
SDF4-205ENST00000465727 PLEKHM3Q6ZWE6 761 aa18.57■□□□□ 0.56
SDF4-205ENST00000465727 OR8K5Q8NH50 307 aa18.57■□□□□ 0.56
SDF4-205ENST00000465727 SLC5A11Q8WWX8 675 aa18.57■□□□□ 0.56
SDF4-205ENST00000465727 ADAMTS14Q8WXS8 1223 aa18.57■□□□□ 0.56
SDF4-205ENST00000465727 SCAMP4Q969E2 229 aa18.57■□□□□ 0.56
SDF4-205ENST00000465727 CASD1Q96PB1 797 aa18.57■□□□□ 0.56
SDF4-205ENST00000465727 SECISBP2Q96T21 854 aaKnown RBP18.57■□□□□ 0.56
SDF4-205ENST00000465727 ZNF649Q9BS31 505 aa18.57■□□□□ 0.56
SDF4-205ENST00000465727 ZDHHC6Q9H6R6 413 aa18.57■□□□□ 0.56
SDF4-205ENST00000465727 EVA1BQ9NVM1 165 aa18.57■□□□□ 0.56
SDF4-205ENST00000465727 ZNF624Q9P2J8 865 aaPredicted RBP18.57■□□□□ 0.56
SDF4-205ENST00000465727 TNFRSF10DQ9UBN6 386 aa18.57■□□□□ 0.56
SDF4-205ENST00000465727 SCP2D1Q9UJQ7 156 aa18.57■□□□□ 0.56
SDF4-205ENST00000465727 HS3ST2Q9Y278 367 aa18.57■□□□□ 0.56
SDF4-205ENST00000465727 MAB21L2Q9Y586 359 aa18.57■□□□□ 0.56
SDF4-205ENST00000465727 PRRG1O14668 218 aa18.56■□□□□ 0.56
SDF4-205ENST00000465727 C1orf105O95561 183 aa18.56■□□□□ 0.56
SDF4-205ENST00000465727 TFPIP10646 304 aa18.56■□□□□ 0.56
SDF4-205ENST00000465727 WEE1P30291 646 aa18.56■□□□□ 0.56
SDF4-205ENST00000465727 FRKP42685 505 aaPredicted RBP18.56■□□□□ 0.56
SDF4-205ENST00000465727 EPHA4P54764 986 aa18.56■□□□□ 0.56
SDF4-205ENST00000465727 CCL23P55773 120 aa18.56■□□□□ 0.56
SDF4-205ENST00000465727 FKBP1BP68106 108 aa18.56■□□□□ 0.56
SDF4-205ENST00000465727 TSPAN31Q12999 210 aa18.56■□□□□ 0.56
SDF4-205ENST00000465727 CAMK2DQ13557 499 aa18.56■□□□□ 0.56
SDF4-205ENST00000465727 AADACL4Q5VUY2 407 aa18.56■□□□□ 0.56
SDF4-205ENST00000465727 RASSF6Q6ZTQ3 369 aa18.56■□□□□ 0.56
SDF4-205ENST00000465727 SLC9B2Q86UD5 537 aa18.56■□□□□ 0.56
SDF4-205ENST00000465727 MMP21Q8N119 569 aa18.56■□□□□ 0.56
SDF4-205ENST00000465727 SPRYD4Q8WW59 207 aaPredicted RBP18.56■□□□□ 0.56
SDF4-205ENST00000465727 ZNF578Q96N58 590 aaPredicted RBP18.56■□□□□ 0.56
SDF4-205ENST00000465727 TMEM175Q9BSA9 504 aa18.56■□□□□ 0.56
SDF4-205ENST00000465727 SMG9Q9H0W8 520 aaKnown RBP18.56■□□□□ 0.56
SDF4-205ENST00000465727 UCKL1Q9NWZ5 548 aa18.56■□□□□ 0.56
SDF4-205ENST00000465727 MARK1Q9P0L2 795 aa18.56■□□□□ 0.56
SDF4-205ENST00000465727 SH2B3Q9UQQ2 575 aa18.56■□□□□ 0.56
SDF4-205ENST00000465727 NUP210Q8TEM1 1887 aaPredicted RBP18.56■□□□□ 0.56
SDF4-205ENST00000465727 SULT1A3P0DMM9 295 aa18.56■□□□□ 0.56
SDF4-205ENST00000465727 SULT1A4P0DMN0 295 aa18.56■□□□□ 0.56
SDF4-205ENST00000465727 CD70P32970 193 aa18.56■□□□□ 0.56
SDF4-205ENST00000465727 NNMTP40261 264 aa18.56■□□□□ 0.56
SDF4-205ENST00000465727 ZNF322Q6U7Q0 402 aaPredicted RBP18.56■□□□□ 0.56
SDF4-205ENST00000465727 GET4Q7L5D6 327 aaPredicted RBP18.56■□□□□ 0.56
SDF4-205ENST00000465727 KRT74Q7RTS7 529 aa18.56■□□□□ 0.56
SDF4-205ENST00000465727 GJD3Q8N144 294 aa18.56■□□□□ 0.56
SDF4-205ENST00000465727 ZNF764Q96H86 408 aaPredicted RBP18.56■□□□□ 0.56
SDF4-205ENST00000465727 C7orf50Q9BRJ6 194 aaKnown RBP18.56■□□□□ 0.56
SDF4-205ENST00000465727 GSX2Q9BZM3 304 aa18.56■□□□□ 0.56
SDF4-205ENST00000465727 CREBZFQ9NS37 354 aa18.56■□□□□ 0.56
SDF4-205ENST00000465727 ZNF275Q9NSD4 429 aaPredicted RBP18.56■□□□□ 0.56
SDF4-205ENST00000465727 SIRT3Q9NTG7 399 aaPredicted RBP18.56■□□□□ 0.56
SDF4-205ENST00000465727 EMC3Q9P0I2 261 aa18.56■□□□□ 0.56
SDF4-205ENST00000465727 PTGFRNQ9P2B2 879 aa18.56■□□□□ 0.56
SDF4-205ENST00000465727 BACE2Q9Y5Z0 518 aa18.56■□□□□ 0.56
SDF4-205ENST00000465727 EEF1E1O43324 174 aaKnown RBP18.55■□□□□ 0.56
SDF4-205ENST00000465727 BNIP3LO60238 219 aa18.55■□□□□ 0.56
SDF4-205ENST00000465727 SERPINI2O75830 405 aa18.55■□□□□ 0.56
SDF4-205ENST00000465727 ALDH1A1P00352 501 aa18.55■□□□□ 0.56
SDF4-205ENST00000465727 UGT2B7P16662 529 aa18.55■□□□□ 0.56
SDF4-205ENST00000465727 CXCL3P19876 107 aa18.55■□□□□ 0.56
SDF4-205ENST00000465727 IL32P24001 234 aa18.55■□□□□ 0.56
SDF4-205ENST00000465727 DNASE1P24855 282 aa18.55■□□□□ 0.56
SDF4-205ENST00000465727 BMP8BP34820 402 aa18.55■□□□□ 0.56
SDF4-205ENST00000465727 ETV3P41162 512 aa18.55■□□□□ 0.56
SDF4-205ENST00000465727 PCBP4P57723 403 aaKnown RBP18.55■□□□□ 0.56
SDF4-205ENST00000465727 BMP8AQ7Z5Y6 402 aa18.55■□□□□ 0.56
SDF4-205ENST00000465727 CPXM2Q8N436 756 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms