RNA–Protein interactions for RNA: ENST00000465471.5

SKA3-205, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 5

Gene SKA3, Length 930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-205ENST00000465471 SIAH3Q8IW03 269 aa18.68■□□□□ 0.58
SKA3-205ENST00000465471 SLC44A2Q8IWA5 706 aaPredicted RBP18.68■□□□□ 0.58
SKA3-205ENST00000465471 FAM13CQ8NE31 585 aa18.68■□□□□ 0.58
SKA3-205ENST00000465471 OR2M7Q8NG81 312 aa18.68■□□□□ 0.58
SKA3-205ENST00000465471 SPPL2AQ8TCT8 520 aa18.68■□□□□ 0.58
SKA3-205ENST00000465471 TMBIM1Q969X1 311 aa18.68■□□□□ 0.58
SKA3-205ENST00000465471 ZCCHC3Q9NUD5 404 aaKnown RBP18.68■□□□□ 0.58
SKA3-205ENST00000465471 GCN1Q92616 2671 aaKnown RBP18.67■□□□□ 0.58
SKA3-205ENST00000465471 OR6C70A6NIJ9 312 aa18.67■□□□□ 0.58
SKA3-205ENST00000465471 C9JVG2 144 aa18.67■□□□□ 0.58
SKA3-205ENST00000465471 TP53I11O14683 189 aa18.67■□□□□ 0.58
SKA3-205ENST00000465471 SLC22A3O75751 556 aa18.67■□□□□ 0.58
SKA3-205ENST00000465471 NKX2-2O95096 273 aa18.67■□□□□ 0.58
SKA3-205ENST00000465471 P04436 131 aa18.67■□□□□ 0.58
SKA3-205ENST00000465471 PGRP06401 933 aa18.67■□□□□ 0.58
SKA3-205ENST00000465471 EDN3P14138 238 aa18.67■□□□□ 0.58
SKA3-205ENST00000465471 MST1P26927 711 aa18.67■□□□□ 0.58
SKA3-205ENST00000465471 S100A3P33764 101 aa18.67■□□□□ 0.58
SKA3-205ENST00000465471 FOXO1Q12778 655 aa18.67■□□□□ 0.58
SKA3-205ENST00000465471 ZNHIT3Q15649 155 aaPredicted RBP18.67■□□□□ 0.58
SKA3-205ENST00000465471 CYP27C1Q4G0S4 372 aa18.67■□□□□ 0.58
SKA3-205ENST00000465471 ZCCHC12Q6PEW1 402 aa18.67■□□□□ 0.58
SKA3-205ENST00000465471 WDR53Q7Z5U6 358 aaPredicted RBP18.67■□□□□ 0.58
SKA3-205ENST00000465471 CDRT4Q8N9R6 151 aa18.67■□□□□ 0.58
SKA3-205ENST00000465471 OR4N2Q8NGD1 307 aa18.67■□□□□ 0.58
SKA3-205ENST00000465471 OR56A1Q8NGH5 318 aa18.67■□□□□ 0.58
SKA3-205ENST00000465471 GOT1L1Q8NHS2 421 aaPredicted RBP18.67■□□□□ 0.58
SKA3-205ENST00000465471 RFWD2Q8NHY2 731 aa18.67■□□□□ 0.58
SKA3-205ENST00000465471 RNF138Q8WVD3 245 aa18.67■□□□□ 0.58
SKA3-205ENST00000465471 MOAP1Q96BY2 351 aa18.67■□□□□ 0.58
SKA3-205ENST00000465471 CCDC115Q96NT0 180 aa18.67■□□□□ 0.58
SKA3-205ENST00000465471 FAM173AQ9BQD7 235 aa18.67■□□□□ 0.58
SKA3-205ENST00000465471 NPHS2Q9NP85 383 aa18.67■□□□□ 0.58
SKA3-205ENST00000465471 EQTNQ9NQ60 294 aa18.67■□□□□ 0.58
SKA3-205ENST00000465471 GPATCH2Q9NW75 528 aa18.67■□□□□ 0.58
SKA3-205ENST00000465471 BTNL2Q9UIR0 455 aa18.67■□□□□ 0.58
SKA3-205ENST00000465471 RP1L1Q8IWN7 2480 aaPredicted RBP18.66■□□□□ 0.58
SKA3-205ENST00000465471 MYO18BQ8IUG5 2567 aa18.66■□□□□ 0.58
SKA3-205ENST00000465471 ABCB7O75027 752 aa18.66■□□□□ 0.58
SKA3-205ENST00000465471 UGT2B11O75310 529 aa18.66■□□□□ 0.58
SKA3-205ENST00000465471 GLSO94925 669 aaPredicted RBP18.66■□□□□ 0.58
SKA3-205ENST00000465471 CBX6O95503 412 aa18.66■□□□□ 0.58
SKA3-205ENST00000465471 ACP2P11117 423 aa18.66■□□□□ 0.58
SKA3-205ENST00000465471 PIGAP37287 484 aa18.66■□□□□ 0.58
SKA3-205ENST00000465471 CCT3P49368 545 aaKnown RBP18.66■□□□□ 0.58
SKA3-205ENST00000465471 DGKQP52824 942 aa18.66■□□□□ 0.58
SKA3-205ENST00000465471 PRKAG1P54619 331 aa18.66■□□□□ 0.58
SKA3-205ENST00000465471 IRX1P78414 480 aaPredicted RBP18.66■□□□□ 0.58
SKA3-205ENST00000465471 GAB1Q13480 694 aa18.66■□□□□ 0.58
SKA3-205ENST00000465471 TBCELQ5QJ74 424 aa18.66■□□□□ 0.58
SKA3-205ENST00000465471 DESI1Q6ICB0 168 aa18.66■□□□□ 0.58
SKA3-205ENST00000465471 CGB2Q6NT52 195 aa18.66■□□□□ 0.58
SKA3-205ENST00000465471 NUP54Q7Z3B4 507 aa18.66■□□□□ 0.58
SKA3-205ENST00000465471 MIER2Q8N344 545 aa18.66■□□□□ 0.58
SKA3-205ENST00000465471 ST6GALNAC3Q8NDV1 305 aa18.66■□□□□ 0.58
SKA3-205ENST00000465471 OR5M3Q8NGP4 307 aa18.66■□□□□ 0.58
SKA3-205ENST00000465471 OR9I1Q8NGQ6 314 aa18.66■□□□□ 0.58
SKA3-205ENST00000465471 THOC1Q96FV9 657 aaKnown RBP18.66■□□□□ 0.58
SKA3-205ENST00000465471 ZBTB18Q99592 522 aa18.66■□□□□ 0.58
SKA3-205ENST00000465471 Q9N2J8 555 aa18.66■□□□□ 0.58
SKA3-205ENST00000465471 FGFR1OP2Q9NVK5 253 aa18.66■□□□□ 0.58
SKA3-205ENST00000465471 GIN1Q9NXP7 522 aa18.66■□□□□ 0.58
SKA3-205ENST00000465471 SNX8Q9Y5X2 465 aa18.66■□□□□ 0.58
SKA3-205ENST00000465471 SVILO95425 2214 aa18.65■□□□□ 0.58
SKA3-205ENST00000465471 G3V3Y1 287 aa18.65■□□□□ 0.58
SKA3-205ENST00000465471 PYCARD-AS1I3L0S3 204 aa18.65■□□□□ 0.58
SKA3-205ENST00000465471 CFLARO15519 480 aa18.65■□□□□ 0.58
SKA3-205ENST00000465471 HMGN2P05204 90 aaKnown RBP18.65■□□□□ 0.58
SKA3-205ENST00000465471 IL6P05231 212 aa18.65■□□□□ 0.58
SKA3-205ENST00000465471 ZNF24P17028 368 aa18.65■□□□□ 0.58
SKA3-205ENST00000465471 CASP3P42574 277 aa18.65■□□□□ 0.58
SKA3-205ENST00000465471 DNASE1L1P49184 302 aa18.65■□□□□ 0.58
SKA3-205ENST00000465471 ATP4BP51164 291 aa18.65■□□□□ 0.58
SKA3-205ENST00000465471 PNLIPRP2P54317 469 aa18.65■□□□□ 0.58
SKA3-205ENST00000465471 HYAL4Q2M3T9 481 aa18.65■□□□□ 0.58
SKA3-205ENST00000465471 VPS26BQ4G0F5 336 aa18.65■□□□□ 0.58
SKA3-205ENST00000465471 PRAMEF20Q5VT98 475 aa18.65■□□□□ 0.58
SKA3-205ENST00000465471 PAOXQ6QHF9 649 aa18.65■□□□□ 0.58
SKA3-205ENST00000465471 GK5Q6ZS86 529 aa18.65■□□□□ 0.58
SKA3-205ENST00000465471 SZRD1Q7Z422 152 aa18.65■□□□□ 0.58
SKA3-205ENST00000465471 ANKRD46Q86W74 232 aa18.65■□□□□ 0.58
SKA3-205ENST00000465471 ATCAYQ86WG3 371 aa18.65■□□□□ 0.58
SKA3-205ENST00000465471 SLC16A11Q8NCK7 471 aa18.65■□□□□ 0.58
SKA3-205ENST00000465471 VPS37AQ8NEZ2 397 aa18.65■□□□□ 0.58
SKA3-205ENST00000465471 DIO2Q92813 273 aa18.65■□□□□ 0.58
SKA3-205ENST00000465471 C16orf58Q96GQ5 468 aa18.65■□□□□ 0.58
SKA3-205ENST00000465471 COL21A1Q96P44 957 aa18.65■□□□□ 0.58
SKA3-205ENST00000465471 NODALQ96S42 347 aa18.65■□□□□ 0.58
SKA3-205ENST00000465471 ANGPTL4Q9BY76 406 aa18.65■□□□□ 0.58
SKA3-205ENST00000465471 DCTN4Q9UJW0 460 aa18.65■□□□□ 0.58
SKA3-205ENST00000465471 CBLCQ9ULV8 474 aa18.65■□□□□ 0.58
SKA3-205ENST00000465471 OR10H1Q9Y4A9 318 aa18.65■□□□□ 0.58
SKA3-205ENST00000465471 TENM4Q6N022 2769 aa18.64■□□□□ 0.58
SKA3-205ENST00000465471 TRIM3O75382 744 aaPredicted RBP18.64■□□□□ 0.57
SKA3-205ENST00000465471 WISP2O76076 250 aa18.64■□□□□ 0.57
SKA3-205ENST00000465471 PTGDSP41222 190 aa18.64■□□□□ 0.57
SKA3-205ENST00000465471 MAN2A2P49641 1150 aa18.64■□□□□ 0.57
SKA3-205ENST00000465471 PRIM2P49643 509 aa18.64■□□□□ 0.57
SKA3-205ENST00000465471 RPP38P78345 283 aaKnown RBP18.64■□□□□ 0.57
SKA3-205ENST00000465471 ALDH6A1Q02252 535 aaKnown RBP18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms