RNA–Protein interactions for RNA: ENST00000464493.5

SQSTM1-205, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-205ENST00000464493 GABRA3P34903 492 aa13.34□□□□□ -0.27
SQSTM1-205ENST00000464493 KRT20P35900 424 aa13.34□□□□□ -0.27
SQSTM1-205ENST00000464493 PIGAP37287 484 aa13.34□□□□□ -0.27
SQSTM1-205ENST00000464493 MDH1P40925 334 aaKnown RBP13.34□□□□□ -0.27
SQSTM1-205ENST00000464493 DGKQP52824 942 aa13.34□□□□□ -0.27
SQSTM1-205ENST00000464493 ALDH6A1Q02252 535 aaKnown RBP13.34□□□□□ -0.27
SQSTM1-205ENST00000464493 GAB1Q13480 694 aa13.34□□□□□ -0.27
SQSTM1-205ENST00000464493 SPDYE7PQ495Y7 208 aa13.34□□□□□ -0.27
SQSTM1-205ENST00000464493 VPS26BQ4G0F5 336 aa13.34□□□□□ -0.27
SQSTM1-205ENST00000464493 CYP27C1Q4G0S4 372 aa13.34□□□□□ -0.27
SQSTM1-205ENST00000464493 PRAMEF20Q5VT98 475 aa13.34□□□□□ -0.27
SQSTM1-205ENST00000464493 ZCCHC12Q6PEW1 402 aa13.34□□□□□ -0.27
SQSTM1-205ENST00000464493 ANKRD46Q86W74 232 aa13.34□□□□□ -0.27
SQSTM1-205ENST00000464493 CLECL1Q8IZS7 167 aa13.34□□□□□ -0.27
SQSTM1-205ENST00000464493 MIER2Q8N344 545 aa13.34□□□□□ -0.27
SQSTM1-205ENST00000464493 FBXW8Q8N3Y1 598 aa13.34□□□□□ -0.27
SQSTM1-205ENST00000464493 ZFP62Q8NB50 900 aaPredicted RBP13.34□□□□□ -0.27
SQSTM1-205ENST00000464493 OR4N2Q8NGD1 307 aa13.34□□□□□ -0.27
SQSTM1-205ENST00000464493 OR56A1Q8NGH5 318 aa13.34□□□□□ -0.27
SQSTM1-205ENST00000464493 OR4A15Q8NGL6 344 aa13.34□□□□□ -0.27
SQSTM1-205ENST00000464493 SPPL2AQ8TCT8 520 aa13.34□□□□□ -0.27
SQSTM1-205ENST00000464493 DIO2Q92813 273 aa13.34□□□□□ -0.27
SQSTM1-205ENST00000464493 MOAP1Q96BY2 351 aa13.34□□□□□ -0.27
SQSTM1-205ENST00000464493 SLX1AQ9BQ83 275 aa13.34□□□□□ -0.27
SQSTM1-205ENST00000464493 FAM173AQ9BQD7 235 aa13.34□□□□□ -0.27
SQSTM1-205ENST00000464493 SIKE1Q9BRV8 207 aa13.34□□□□□ -0.27
SQSTM1-205ENST00000464493 CCDC134Q9H6E4 229 aa13.34□□□□□ -0.27
SQSTM1-205ENST00000464493 Q9N2J8 555 aa13.34□□□□□ -0.27
SQSTM1-205ENST00000464493 NPHS2Q9NP85 383 aa13.34□□□□□ -0.27
SQSTM1-205ENST00000464493 FAM120CQ9NX05 1096 aaKnown RBP13.34□□□□□ -0.27
SQSTM1-205ENST00000464493 DCTN4Q9UJW0 460 aa13.34□□□□□ -0.27
SQSTM1-205ENST00000464493 CNOT11Q9UKZ1 510 aaKnown RBP13.34□□□□□ -0.27
SQSTM1-205ENST00000464493 EXPH5Q8NEV8 1989 aa13.34□□□□□ -0.27
SQSTM1-205ENST00000464493 NINQ8N4C6 2090 aa13.33□□□□□ -0.27
SQSTM1-205ENST00000464493 GCN1Q92616 2671 aaKnown RBP13.33□□□□□ -0.28
SQSTM1-205ENST00000464493 A0A0G2JMM0 328 aa13.33□□□□□ -0.28
SQSTM1-205ENST00000464493 A0A1W2PPB8 328 aa13.33□□□□□ -0.28
SQSTM1-205ENST00000464493 A0A1W2PRS3 328 aa13.33□□□□□ -0.28
SQSTM1-205ENST00000464493 PINLYPA6NC86 204 aa13.33□□□□□ -0.28
SQSTM1-205ENST00000464493 ANKRD33BA6NCL7 494 aa13.33□□□□□ -0.28
SQSTM1-205ENST00000464493 OR6C70A6NIJ9 312 aa13.33□□□□□ -0.28
SQSTM1-205ENST00000464493 KIR3DP1A8MWS1 328 aa13.33□□□□□ -0.28
SQSTM1-205ENST00000464493 C9JVG2 144 aa13.33□□□□□ -0.28
SQSTM1-205ENST00000464493 TSPAN2O60636 221 aa13.33□□□□□ -0.28
SQSTM1-205ENST00000464493 ABCB7O75027 752 aa13.33□□□□□ -0.28
SQSTM1-205ENST00000464493 UGT2B11O75310 529 aa13.33□□□□□ -0.28
SQSTM1-205ENST00000464493 WISP1O95388 367 aa13.33□□□□□ -0.28
SQSTM1-205ENST00000464493 CBX6O95503 412 aa13.33□□□□□ -0.28
SQSTM1-205ENST00000464493 CPSF4O95639 269 aaKnown RBP13.33□□□□□ -0.28
SQSTM1-205ENST00000464493 HMGN2P05204 90 aaKnown RBP13.33□□□□□ -0.28
SQSTM1-205ENST00000464493 IL6P05231 212 aa13.33□□□□□ -0.28
SQSTM1-205ENST00000464493 PGRP06401 933 aa13.33□□□□□ -0.28
SQSTM1-205ENST00000464493 VIMP08670 466 aaKnown RBP13.33□□□□□ -0.28
SQSTM1-205ENST00000464493 IL12BP29460 328 aa13.33□□□□□ -0.28
SQSTM1-205ENST00000464493 RFC3P40938 356 aa13.33□□□□□ -0.28
SQSTM1-205ENST00000464493 MAP3K8P41279 467 aa13.33□□□□□ -0.28
SQSTM1-205ENST00000464493 DNASE1L1P49184 302 aa13.33□□□□□ -0.28
SQSTM1-205ENST00000464493 PRIM2P49643 509 aa13.33□□□□□ -0.28
SQSTM1-205ENST00000464493 STX1BP61266 288 aa13.33□□□□□ -0.28
SQSTM1-205ENST00000464493 RNFT1Q5M7Z0 435 aa13.33□□□□□ -0.28
SQSTM1-205ENST00000464493 TBCELQ5QJ74 424 aa13.33□□□□□ -0.28
SQSTM1-205ENST00000464493 DESI1Q6ICB0 168 aa13.33□□□□□ -0.28
SQSTM1-205ENST00000464493 BHLHB9Q6PI77 547 aa13.33□□□□□ -0.28
SQSTM1-205ENST00000464493 GK5Q6ZS86 529 aa13.33□□□□□ -0.28
SQSTM1-205ENST00000464493 ST6GALNAC3Q8NDV1 305 aa13.33□□□□□ -0.28
SQSTM1-205ENST00000464493 RFWD2Q8NHY2 731 aa13.33□□□□□ -0.28
SQSTM1-205ENST00000464493 SFXN5Q8TD22 340 aa13.33□□□□□ -0.28
SQSTM1-205ENST00000464493 GPR151Q8TDV0 419 aa13.33□□□□□ -0.28
SQSTM1-205ENST00000464493 STON2Q8WXE9 905 aa13.33□□□□□ -0.28
SQSTM1-205ENST00000464493 SLC9A6Q92581 669 aa13.33□□□□□ -0.28
SQSTM1-205ENST00000464493 HOXB13Q92826 284 aaPredicted RBP13.33□□□□□ -0.28
SQSTM1-205ENST00000464493 HGDQ93099 445 aa13.33□□□□□ -0.28
SQSTM1-205ENST00000464493 C16orf58Q96GQ5 468 aa13.33□□□□□ -0.28
SQSTM1-205ENST00000464493 COL21A1Q96P44 957 aa13.33□□□□□ -0.28
SQSTM1-205ENST00000464493 OR52E6Q96RD3 313 aa13.33□□□□□ -0.28
SQSTM1-205ENST00000464493 ADOQ96SZ5 270 aa13.33□□□□□ -0.28
SQSTM1-205ENST00000464493 PROK2Q9HC23 129 aa13.33□□□□□ -0.28
SQSTM1-205ENST00000464493 FGFR1OP2Q9NVK5 253 aa13.33□□□□□ -0.28
SQSTM1-205ENST00000464493 BTNL2Q9UIR0 455 aa13.33□□□□□ -0.28
SQSTM1-205ENST00000464493 CBLCQ9ULV8 474 aa13.33□□□□□ -0.28
SQSTM1-205ENST00000464493 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.33□□□□□ -0.28
SQSTM1-205ENST00000464493 RELNP78509 3460 aa13.33□□□□□ -0.28
SQSTM1-205ENST00000464493 MYO18BQ8IUG5 2567 aa13.32□□□□□ -0.28
SQSTM1-205ENST00000464493 A0A0G2JND7 137 aa13.32□□□□□ -0.28
SQSTM1-205ENST00000464493 ANKUB1A6NFN9 424 aa13.32□□□□□ -0.28
SQSTM1-205ENST00000464493 NPIPA5E9PKD4 350 aa13.32□□□□□ -0.28
SQSTM1-205ENST00000464493 NKX2-2O95096 273 aa13.32□□□□□ -0.28
SQSTM1-205ENST00000464493 ZNF24P17028 368 aa13.32□□□□□ -0.28
SQSTM1-205ENST00000464493 SOAT1P35610 550 aa13.32□□□□□ -0.28
SQSTM1-205ENST00000464493 CASP3P42574 277 aa13.32□□□□□ -0.28
SQSTM1-205ENST00000464493 MRPL19P49406 292 aaKnown RBP13.32□□□□□ -0.28
SQSTM1-205ENST00000464493 TDGF1P3P51864 188 aa13.32□□□□□ -0.28
SQSTM1-205ENST00000464493 POLR2JP52435 117 aaKnown RBP13.32□□□□□ -0.28
SQSTM1-205ENST00000464493 PNLIPRP2P54317 469 aa13.32□□□□□ -0.28
SQSTM1-205ENST00000464493 KCNJ2P63252 427 aa13.32□□□□□ -0.28
SQSTM1-205ENST00000464493 MRPS22P82650 360 aaKnown RBP13.32□□□□□ -0.28
SQSTM1-205ENST00000464493 PLGLB1Q02325 96 aa13.32□□□□□ -0.28
SQSTM1-205ENST00000464493 TP53BP2Q13625 1128 aa13.32□□□□□ -0.28
SQSTM1-205ENST00000464493 EFR3AQ14156 821 aa13.32□□□□□ -0.28
SQSTM1-205ENST00000464493 LASP1Q14847 261 aaKnown RBP13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms