RNA–Protein interactions for RNA: ENST00000463487.1

COL9A3-204, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 760 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-204ENST00000463487 CORO7P57737 925 aa18.24■□□□□ 0.51
COL9A3-204ENST00000463487 PSG6Q00889 435 aa18.24■□□□□ 0.51
COL9A3-204ENST00000463487 EFR3AQ14156 821 aa18.24■□□□□ 0.51
COL9A3-204ENST00000463487 TIGD2Q4W5G0 525 aa18.24■□□□□ 0.51
COL9A3-204ENST00000463487 COLEC12Q5KU26 742 aa18.24■□□□□ 0.51
COL9A3-204ENST00000463487 LYPD8Q6UX82 237 aa18.24■□□□□ 0.51
COL9A3-204ENST00000463487 GK5Q6ZS86 529 aa18.24■□□□□ 0.51
COL9A3-204ENST00000463487 NUP54Q7Z3B4 507 aa18.24■□□□□ 0.51
COL9A3-204ENST00000463487 ZNF605Q86T29 641 aa18.24■□□□□ 0.51
COL9A3-204ENST00000463487 PRR22Q8IZ63 422 aa18.24■□□□□ 0.51
COL9A3-204ENST00000463487 BCORP1Q8N888 145 aa18.24■□□□□ 0.51
COL9A3-204ENST00000463487 POGLUT1Q8NBL1 392 aa18.24■□□□□ 0.51
COL9A3-204ENST00000463487 OR5M3Q8NGP4 307 aa18.24■□□□□ 0.51
COL9A3-204ENST00000463487 DNAJB8Q8NHS0 232 aa18.24■□□□□ 0.51
COL9A3-204ENST00000463487 CPT1CQ8TCG5 803 aa18.24■□□□□ 0.51
COL9A3-204ENST00000463487 GPR151Q8TDV0 419 aa18.24■□□□□ 0.51
COL9A3-204ENST00000463487 PAQR8Q8TEZ7 354 aa18.24■□□□□ 0.51
COL9A3-204ENST00000463487 TMCO6Q96DC7 493 aa18.24■□□□□ 0.51
COL9A3-204ENST00000463487 ITCHQ96J02 903 aa18.24■□□□□ 0.51
COL9A3-204ENST00000463487 CCDC167Q9P0B6 97 aa18.24■□□□□ 0.51
COL9A3-204ENST00000463487 CBLCQ9ULV8 474 aa18.24■□□□□ 0.51
COL9A3-204ENST00000463487 OR6C70A6NIJ9 312 aa18.23■□□□□ 0.51
COL9A3-204ENST00000463487 DUXAA6NLW8 204 aa18.23■□□□□ 0.51
COL9A3-204ENST00000463487 RFXANKO14593 260 aa18.23■□□□□ 0.51
COL9A3-204ENST00000463487 ZNF354AO60765 605 aaPredicted RBP18.23■□□□□ 0.51
COL9A3-204ENST00000463487 SCN2BO60939 215 aa18.23■□□□□ 0.51
COL9A3-204ENST00000463487 HMGN2P05204 90 aaKnown RBP18.23■□□□□ 0.51
COL9A3-204ENST00000463487 GABRA3P34903 492 aa18.23■□□□□ 0.51
COL9A3-204ENST00000463487 CHI3L1P36222 383 aaPredicted RBP18.23■□□□□ 0.51
COL9A3-204ENST00000463487 ANXA11P50995 505 aaKnown RBP18.23■□□□□ 0.51
COL9A3-204ENST00000463487 GNGT1P63211 74 aa18.23■□□□□ 0.51
COL9A3-204ENST00000463487 RCAN2Q14206 197 aa18.23■□□□□ 0.51
COL9A3-204ENST00000463487 LASP1Q14847 261 aaKnown RBP18.23■□□□□ 0.51
COL9A3-204ENST00000463487 INPP5JQ15735 1006 aaPredicted RBP18.23■□□□□ 0.51
COL9A3-204ENST00000463487 AGKQ53H12 422 aa18.23■□□□□ 0.51
COL9A3-204ENST00000463487 MDGA2Q7Z553 956 aa18.23■□□□□ 0.51
COL9A3-204ENST00000463487 CPLX4Q7Z7G2 160 aa18.23■□□□□ 0.51
COL9A3-204ENST00000463487 ZNF227Q86WZ6 799 aa18.23■□□□□ 0.51
COL9A3-204ENST00000463487 FBXW8Q8N3Y1 598 aa18.23■□□□□ 0.51
COL9A3-204ENST00000463487 CISD2Q8N5K1 135 aaKnown RBP18.23■□□□□ 0.51
COL9A3-204ENST00000463487 OR10G3Q8NGC4 313 aa18.23■□□□□ 0.51
COL9A3-204ENST00000463487 OR9I1Q8NGQ6 314 aa18.23■□□□□ 0.51
COL9A3-204ENST00000463487 OR5AK3PQ8NH89 298 aa18.23■□□□□ 0.51
COL9A3-204ENST00000463487 ADAMTS15Q8TE58 950 aa18.23■□□□□ 0.51
COL9A3-204ENST00000463487 TMBIM1Q969X1 311 aa18.23■□□□□ 0.51
COL9A3-204ENST00000463487 COL21A1Q96P44 957 aa18.23■□□□□ 0.51
COL9A3-204ENST00000463487 FAM173AQ9BQD7 235 aa18.23■□□□□ 0.51
COL9A3-204ENST00000463487 ACTRT3Q9BYD9 372 aa18.23■□□□□ 0.51
COL9A3-204ENST00000463487 EPN3Q9H201 632 aa18.23■□□□□ 0.51
COL9A3-204ENST00000463487 GIN1Q9NXP7 522 aa18.23■□□□□ 0.51
COL9A3-204ENST00000463487 BOD1L1Q8NFC6 3051 aa18.23■□□□□ 0.51
COL9A3-204ENST00000463487 GMNCA6NCL1 334 aa18.22■□□□□ 0.51
COL9A3-204ENST00000463487 NR5A2O00482 541 aa18.22■□□□□ 0.51
COL9A3-204ENST00000463487 PEX1O43933 1283 aa18.22■□□□□ 0.51
COL9A3-204ENST00000463487 CNR1P21554 472 aa18.22■□□□□ 0.51
COL9A3-204ENST00000463487 PNLIPRP2P54317 469 aa18.22■□□□□ 0.51
COL9A3-204ENST00000463487 FBXW4P57775 412 aa18.22■□□□□ 0.51
COL9A3-204ENST00000463487 KCNJ2P63252 427 aa18.22■□□□□ 0.51
COL9A3-204ENST00000463487 PHC1P78364 1004 aa18.22■□□□□ 0.51
COL9A3-204ENST00000463487 C6orf10Q5SRN2 563 aa18.22■□□□□ 0.51
COL9A3-204ENST00000463487 CGB2Q6NT52 195 aa18.22■□□□□ 0.51
COL9A3-204ENST00000463487 CDC73Q6P1J9 531 aa18.22■□□□□ 0.51
COL9A3-204ENST00000463487 BLOC1S3Q6QNY0 202 aa18.22■□□□□ 0.51
COL9A3-204ENST00000463487 NPSR1Q6W5P4 371 aa18.22■□□□□ 0.51
COL9A3-204ENST00000463487 COX18Q8N8Q8 333 aa18.22■□□□□ 0.51
COL9A3-204ENST00000463487 GOT1L1Q8NHS2 421 aaPredicted RBP18.22■□□□□ 0.51
COL9A3-204ENST00000463487 DIO2Q92813 273 aa18.22■□□□□ 0.51
COL9A3-204ENST00000463487 HOXB13Q92826 284 aaPredicted RBP18.22■□□□□ 0.51
COL9A3-204ENST00000463487 SPDL1Q96EA4 605 aa18.22■□□□□ 0.51
COL9A3-204ENST00000463487 SLC35G5Q96KT7 338 aa18.22■□□□□ 0.51
COL9A3-204ENST00000463487 STACQ99469 402 aa18.22■□□□□ 0.51
COL9A3-204ENST00000463487 HES7Q9BYE0 225 aa18.22■□□□□ 0.51
COL9A3-204ENST00000463487 METTL7AQ9H8H3 244 aa18.22■□□□□ 0.51
COL9A3-204ENST00000463487 DUSP22Q9NRW4 184 aa18.22■□□□□ 0.51
COL9A3-204ENST00000463487 GIMAP1-GIMAP5A0A087WTJ2 511 aa18.21■□□□□ 0.51
COL9A3-204ENST00000463487 ACOT7O00154 380 aa18.21■□□□□ 0.51
COL9A3-204ENST00000463487 NKX2-2O95096 273 aa18.21■□□□□ 0.51
COL9A3-204ENST00000463487 AGR2O95994 175 aa18.21■□□□□ 0.51
COL9A3-204ENST00000463487 CCL3P10147 92 aa18.21■□□□□ 0.51
COL9A3-204ENST00000463487 PIGAP37287 484 aa18.21■□□□□ 0.51
COL9A3-204ENST00000463487 MEOX1P50221 254 aa18.21■□□□□ 0.51
COL9A3-204ENST00000463487 MLLT10P55197 1068 aa18.21■□□□□ 0.51
COL9A3-204ENST00000463487 TXNL4AP83876 142 aaKnown RBP18.21■□□□□ 0.51
COL9A3-204ENST00000463487 ANGPTL8Q6UXH0 198 aa18.21■□□□□ 0.51
COL9A3-204ENST00000463487 ZNF621Q6ZSS3 439 aa18.21■□□□□ 0.51
COL9A3-204ENST00000463487 SPATA21Q7Z572 469 aa18.21■□□□□ 0.51
COL9A3-204ENST00000463487 PNPLA5Q7Z6Z6 429 aaPredicted RBP18.21■□□□□ 0.51
COL9A3-204ENST00000463487 SULF2Q8IWU5 870 aa18.21■□□□□ 0.51
COL9A3-204ENST00000463487 SPPL2AQ8TCT8 520 aa18.21■□□□□ 0.51
COL9A3-204ENST00000463487 SNRNP40Q96DI7 357 aaKnown RBP18.21■□□□□ 0.51
COL9A3-204ENST00000463487 GIMAP5Q96F15 307 aa18.21■□□□□ 0.51
COL9A3-204ENST00000463487 SLC35A4Q96G79 324 aa18.21■□□□□ 0.51
COL9A3-204ENST00000463487 SLC35A5Q9BS91 424 aa18.21■□□□□ 0.51
COL9A3-204ENST00000463487 G6PC3Q9BUM1 346 aa18.21■□□□□ 0.51
COL9A3-204ENST00000463487 FAM107BQ9H098 131 aa18.21■□□□□ 0.51
COL9A3-204ENST00000463487 PIGUQ9H490 435 aa18.21■□□□□ 0.51
COL9A3-204ENST00000463487 BOKQ9UMX3 212 aaPredicted RBP18.21■□□□□ 0.51
COL9A3-204ENST00000463487 CHCHD2Q9Y6H1 151 aaPredicted RBP18.21■□□□□ 0.51
COL9A3-204ENST00000463487 ANKRD33BA6NCL7 494 aa18.2■□□□□ 0.5
COL9A3-204ENST00000463487 ASPDHA6ND91 283 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms