RNA–Protein interactions for RNA: ENST00000463013.1

KDM3A-208, Transcript of lysine demethylase 3A, human

TSL 3

Gene KDM3A, Length 577 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KDM3A-208	ENST00000463013	PAGE2B	Q5JRK9	111 aa		2.56	□□□□□ -2
KDM3A-208	ENST00000463013	LGSN	Q5TDP6	509 aa		2.56	□□□□□ -2
KDM3A-208	ENST00000463013	DLEU7	Q6UYE1	221 aa		2.56	□□□□□ -2
KDM3A-208	ENST00000463013	UNC45B	Q8IWX7	931 aa		2.56	□□□□□ -2
KDM3A-208	ENST00000463013	OR2L5	Q8NG80	312 aa		2.56	□□□□□ -2
KDM3A-208	ENST00000463013	DNAJA3	Q96EY1	480 aa		2.56	□□□□□ -2
KDM3A-208	ENST00000463013	DTD2	Q96FN9	168 aa		2.56	□□□□□ -2
KDM3A-208	ENST00000463013	TSPAN18	Q96SJ8	248 aa		2.56	□□□□□ -2
KDM3A-208	ENST00000463013	DPH7	Q9BTV6	452 aa		2.56	□□□□□ -2
KDM3A-208	ENST00000463013	C19orf24	Q9BVV8	132 aa		2.56	□□□□□ -2
KDM3A-208	ENST00000463013	PRO0461	Q9UI25	63 aa		2.56	□□□□□ -2
KDM3A-208	ENST00000463013	DHRS7	Q9Y394	339 aa		2.56	□□□□□ -2
KDM3A-208	ENST00000463013	MTF2	Q9Y483	593 aa	Predicted RBP	2.56	□□□□□ -2
KDM3A-208	ENST00000463013	FLVCR1	Q9Y5Y0	555 aa		2.56	□□□□□ -2
KDM3A-208	ENST00000463013	IGKV6D-21	A0A0A0MT36	114 aa		2.55	□□□□□ -2
KDM3A-208	ENST00000463013	KIN	O60870	393 aa	Known RBP	2.55	□□□□□ -2
KDM3A-208	ENST00000463013	SDC3	O75056	442 aa		2.55	□□□□□ -2
KDM3A-208	ENST00000463013	SERF1A	O75920	110 aa		2.55	□□□□□ -2
KDM3A-208	ENST00000463013	IGSF6	O95976	241 aa		2.55	□□□□□ -2
KDM3A-208	ENST00000463013	HMOX1	P09601	288 aa		2.55	□□□□□ -2
KDM3A-208	ENST00000463013	ZP3	P21754	424 aa		2.55	□□□□□ -2
KDM3A-208	ENST00000463013	TMOD1	P28289	359 aa		2.55	□□□□□ -2
KDM3A-208	ENST00000463013	SST	P61278	116 aa		2.55	□□□□□ -2
KDM3A-208	ENST00000463013	ARF5	P84085	180 aa		2.55	□□□□□ -2
KDM3A-208	ENST00000463013	ZNF699	Q32M78	642 aa		2.55	□□□□□ -2
KDM3A-208	ENST00000463013	HERC4	Q5GLZ8	1057 aa	Predicted RBP	2.55	□□□□□ -2
KDM3A-208	ENST00000463013	YRDC	Q86U90	279 aa	Known RBP	2.55	□□□□□ -2
KDM3A-208	ENST00000463013	PEX5L	Q8IYB4	626 aa		2.55	□□□□□ -2
KDM3A-208	ENST00000463013	CEND1	Q8N111	149 aa		2.55	□□□□□ -2
KDM3A-208	ENST00000463013	TNR	Q92752	1358 aa		2.55	□□□□□ -2
KDM3A-208	ENST00000463013	FRAT1	Q92837	279 aa	Predicted RBP	2.55	□□□□□ -2
KDM3A-208	ENST00000463013	SNX21	Q969T3	373 aa		2.55	□□□□□ -2
KDM3A-208	ENST00000463013	ZNF560	Q96MR9	790 aa		2.55	□□□□□ -2
KDM3A-208	ENST00000463013	NAP1L3	Q99457	506 aa	Predicted RBP	2.55	□□□□□ -2
KDM3A-208	ENST00000463013	CBWD1	Q9BRT8	395 aa		2.55	□□□□□ -2
KDM3A-208	ENST00000463013	TEX13A	Q9BXU3	409 aa	Predicted RBP	2.55	□□□□□ -2
KDM3A-208	ENST00000463013	CARD9	Q9H257	536 aa		2.55	□□□□□ -2
KDM3A-208	ENST00000463013	ZNF702P	Q9H963	129 aa		2.55	□□□□□ -2
KDM3A-208	ENST00000463013	MID1IP1	Q9NPA3	183 aa		2.55	□□□□□ -2
KDM3A-208	ENST00000463013	EXOSC3	Q9NQT5	275 aa	Known RBP	2.55	□□□□□ -2
KDM3A-208	ENST00000463013	NDUFA13	Q9P0J0	144 aa		2.55	□□□□□ -2
KDM3A-208	ENST00000463013	MBD2	Q9UBB5	411 aa		2.55	□□□□□ -2
KDM3A-208	ENST00000463013	FAM153A	Q9UHL3	310 aa		2.55	□□□□□ -2
KDM3A-208	ENST00000463013	TRMT6	Q9UJA5	497 aa	Known RBP	2.55	□□□□□ -2
KDM3A-208	ENST00000463013	BARX2	Q9UMQ3	279 aa	Predicted RBP	2.55	□□□□□ -2
KDM3A-208	ENST00000463013	RAD54L2	Q9Y4B4	1467 aa		2.54	□□□□□ -2
KDM3A-208	ENST00000463013	ZMYM6	O95789	1325 aa		2.54	□□□□□ -2
KDM3A-208	ENST00000463013	STK17B	O94768	372 aa		2.54	□□□□□ -2
KDM3A-208	ENST00000463013	TOX	O94900	526 aa		2.54	□□□□□ -2
KDM3A-208	ENST00000463013	HSPB1	P04792	205 aa	Known RBP	2.54	□□□□□ -2
KDM3A-208	ENST00000463013	CD1E	P15812	388 aa		2.54	□□□□□ -2
KDM3A-208	ENST00000463013	SDC1	P18827	310 aa		2.54	□□□□□ -2
KDM3A-208	ENST00000463013	ACVR1B	P36896	505 aa		2.54	□□□□□ -2
KDM3A-208	ENST00000463013	STK19	P49842	368 aa	Predicted RBP	2.54	□□□□□ -2
KDM3A-208	ENST00000463013	HNRNPF	P52597	415 aa	Known RBP	2.54	□□□□□ -2
KDM3A-208	ENST00000463013	NOP14	P78316	857 aa	Known RBP	2.54	□□□□□ -2
KDM3A-208	ENST00000463013	PUDP	Q08623	228 aa		2.54	□□□□□ -2
KDM3A-208	ENST00000463013	RPA4	Q13156	261 aa		2.54	□□□□□ -2
KDM3A-208	ENST00000463013	NME3	Q13232	169 aa		2.54	□□□□□ -2
KDM3A-208	ENST00000463013	IL18R1	Q13478	541 aa		2.54	□□□□□ -2
KDM3A-208	ENST00000463013	MEDAG	Q5VYS4	303 aa		2.54	□□□□□ -2
KDM3A-208	ENST00000463013	AMZ2	Q86W34	360 aa		2.54	□□□□□ -2
KDM3A-208	ENST00000463013	CNTN4	Q8IWV2	1026 aa		2.54	□□□□□ -2
KDM3A-208	ENST00000463013	MCOLN2	Q8IZK6	566 aa		2.54	□□□□□ -2
KDM3A-208	ENST00000463013	CADM2	Q8N3J6	435 aa		2.54	□□□□□ -2
KDM3A-208	ENST00000463013	C14orf178	Q8N769	122 aa	Predicted RBP	2.54	□□□□□ -2
KDM3A-208	ENST00000463013	ZNF397	Q8NF99	534 aa	Predicted RBP	2.54	□□□□□ -2
KDM3A-208	ENST00000463013	TM2D1	Q9BX74	207 aa		2.54	□□□□□ -2
KDM3A-208	ENST00000463013	CYP39A1	Q9NYL5	469 aa		2.54	□□□□□ -2
KDM3A-208	ENST00000463013	HMG20B	Q9P0W2	317 aa		2.54	□□□□□ -2
KDM3A-208	ENST00000463013	TDRKH	Q9Y2W6	561 aa	Known RBP	2.54	□□□□□ -2
KDM3A-208	ENST00000463013	TEX264	Q9Y6I9	313 aa		2.54	□□□□□ -2
KDM3A-208	ENST00000463013	DHX29	Q7Z478	1369 aa	Known RBP	2.53	□□□□□ -2
KDM3A-208	ENST00000463013	TRBV2	A0A0J9YWF9	115 aa		2.53	□□□□□ -2
KDM3A-208	ENST00000463013	WI2-2373I1.2	A0A1W2PRP0	233 aa		2.53	□□□□□ -2
KDM3A-208	ENST00000463013	TMEM89	A2RUT3	159 aa		2.53	□□□□□ -2
KDM3A-208	ENST00000463013	HSF2BP	O75031	334 aa		2.53	□□□□□ -2
KDM3A-208	ENST00000463013	NOL4	O94818	638 aa		2.53	□□□□□ -2
KDM3A-208	ENST00000463013	PNP	P00491	289 aa		2.53	□□□□□ -2
KDM3A-208	ENST00000463013	ABHD2	P08910	425 aa		2.53	□□□□□ -2
KDM3A-208	ENST00000463013	GNS	P15586	552 aa		2.53	□□□□□ -2
KDM3A-208	ENST00000463013	PSMB1	P20618	241 aa	Known RBP	2.53	□□□□□ -2
KDM3A-208	ENST00000463013	RFC2	P35250	354 aa		2.53	□□□□□ -2
KDM3A-208	ENST00000463013	MAGEA4	P43358	317 aa		2.53	□□□□□ -2
KDM3A-208	ENST00000463013	TRPC1	P48995	793 aa		2.53	□□□□□ -2
KDM3A-208	ENST00000463013	RIPK4	P57078	832 aa		2.53	□□□□□ -2
KDM3A-208	ENST00000463013	SRP54	P61011	504 aa	Known RBP	2.53	□□□□□ -2
KDM3A-208	ENST00000463013	GFPT1	Q06210	699 aa	Predicted RBP	2.53	□□□□□ -2
KDM3A-208	ENST00000463013	BTG3	Q14201	252 aa	Predicted RBP	2.53	□□□□□ -2
KDM3A-208	ENST00000463013	LASP1	Q14847	261 aa	Known RBP	2.53	□□□□□ -2
KDM3A-208	ENST00000463013	CAMK4	Q16566	473 aa		2.53	□□□□□ -2
KDM3A-208	ENST00000463013	HFE	Q30201	348 aa		2.53	□□□□□ -2
KDM3A-208	ENST00000463013	C2orf76	Q3KRA6	126 aa		2.53	□□□□□ -2
KDM3A-208	ENST00000463013	DCAF4L1	Q3SXM0	396 aa		2.53	□□□□□ -2
KDM3A-208	ENST00000463013	ACSF3	Q4G176	576 aa	Predicted RBP	2.53	□□□□□ -2
KDM3A-208	ENST00000463013	C1QTNF12	Q5T7M4	302 aa		2.53	□□□□□ -2
KDM3A-208	ENST00000463013	GPBP1	Q86WP2	473 aa		2.53	□□□□□ -2
KDM3A-208	ENST00000463013	C9orf40	Q8IXQ3	194 aa		2.53	□□□□□ -2
KDM3A-208	ENST00000463013	LEMD2	Q8NC56	503 aa		2.53	□□□□□ -2
KDM3A-208	ENST00000463013	SETD7	Q8WTS6	366 aa	Known RBP	2.53	□□□□□ -2

Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms