RNA–Protein interactions for RNA: ENST00000462306.5

ERCC3-206, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 963 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-206ENST00000462306 HOXB13Q92826 284 aaPredicted RBP14.54□□□□□ -0.08
ERCC3-206ENST00000462306 SLC35A4Q96G79 324 aa14.54□□□□□ -0.08
ERCC3-206ENST00000462306 MAELQ96JY0 434 aaKnown RBP14.54□□□□□ -0.08
ERCC3-206ENST00000462306 C7orf26Q96N11 449 aa14.54□□□□□ -0.08
ERCC3-206ENST00000462306 NODALQ96S42 347 aa14.54□□□□□ -0.08
ERCC3-206ENST00000462306 LMF2Q9BU23 707 aaKnown RBP14.54□□□□□ -0.08
ERCC3-206ENST00000462306 DOHHQ9BU89 302 aa14.54□□□□□ -0.08
ERCC3-206ENST00000462306 BHLHE41Q9C0J9 482 aaPredicted RBP14.54□□□□□ -0.08
ERCC3-206ENST00000462306 ZFP64Q9NPA5 681 aa14.54□□□□□ -0.08
ERCC3-206ENST00000462306 ATAD3AQ9NVI7 634 aa14.54□□□□□ -0.08
ERCC3-206ENST00000462306 GIMAP1-GIMAP5A0A087WTJ2 511 aa14.53□□□□□ -0.08
ERCC3-206ENST00000462306 GOLGA8QA0A0J9YX86 632 aa14.53□□□□□ -0.08
ERCC3-206ENST00000462306 GOLGA8OA6NCC3 632 aa14.53□□□□□ -0.08
ERCC3-206ENST00000462306 OR6C70A6NIJ9 312 aa14.53□□□□□ -0.08
ERCC3-206ENST00000462306 GOLGA8NF8WBI6 632 aa14.53□□□□□ -0.08
ERCC3-206ENST00000462306 ACOT7O00154 380 aa14.53□□□□□ -0.08
ERCC3-206ENST00000462306 ZNHIT1O43257 154 aa14.53□□□□□ -0.08
ERCC3-206ENST00000462306 TSPAN2O60636 221 aa14.53□□□□□ -0.08
ERCC3-206ENST00000462306 SLC19A2O60779 497 aa14.53□□□□□ -0.08
ERCC3-206ENST00000462306 REM1O75628 298 aa14.53□□□□□ -0.08
ERCC3-206ENST00000462306 AGFG2O95081 481 aa14.53□□□□□ -0.08
ERCC3-206ENST00000462306 RFPL3SP0C7P2 107 aa14.53□□□□□ -0.08
ERCC3-206ENST00000462306 MAGEA5P43359 124 aa14.53□□□□□ -0.08
ERCC3-206ENST00000462306 RPP38P78345 283 aaKnown RBP14.53□□□□□ -0.08
ERCC3-206ENST00000462306 RBPJQ06330 500 aa14.53□□□□□ -0.08
ERCC3-206ENST00000462306 ZNF800Q2TB10 664 aaPredicted RBP eCLIP14.53□□□□□ -0.083e-9■■□□□ 11.4
ERCC3-206ENST00000462306 C4orf17Q53FE4 359 aa14.53□□□□□ -0.08
ERCC3-206ENST00000462306 FNDC7Q5VTL7 733 aa14.53□□□□□ -0.08
ERCC3-206ENST00000462306 WDR53Q7Z5U6 358 aaPredicted RBP14.53□□□□□ -0.08
ERCC3-206ENST00000462306 NUP43Q8NFH3 380 aa14.53□□□□□ -0.08
ERCC3-206ENST00000462306 LRRC8CQ8TDW0 803 aa14.53□□□□□ -0.08
ERCC3-206ENST00000462306 OR5P2Q8WZ92 322 aa14.53□□□□□ -0.08
ERCC3-206ENST00000462306 GIMAP5Q96F15 307 aa14.53□□□□□ -0.08
ERCC3-206ENST00000462306 RILPQ96NA2 401 aa14.53□□□□□ -0.08
ERCC3-206ENST00000462306 COL21A1Q96P44 957 aa14.53□□□□□ -0.08
ERCC3-206ENST00000462306 DUSP26Q9BV47 211 aa14.53□□□□□ -0.08
ERCC3-206ENST00000462306 DEFB127Q9H1M4 99 aa14.53□□□□□ -0.08
ERCC3-206ENST00000462306 SLCO1B3Q9NPD5 702 aa14.53□□□□□ -0.08
ERCC3-206ENST00000462306 BOKQ9UMX3 212 aaPredicted RBP14.53□□□□□ -0.08
ERCC3-206ENST00000462306 MAPRE3Q9UPY8 281 aa14.53□□□□□ -0.08
ERCC3-206ENST00000462306 SLC5A6Q9Y289 635 aa14.53□□□□□ -0.08
ERCC3-206ENST00000462306 WIPF3A6NGB9 483 aa14.52□□□□□ -0.09
ERCC3-206ENST00000462306 LRRTM2O43300 516 aa14.52□□□□□ -0.09
ERCC3-206ENST00000462306 EMC8O43402 210 aa14.52□□□□□ -0.09
ERCC3-206ENST00000462306 ABCB7O75027 752 aa14.52□□□□□ -0.09
ERCC3-206ENST00000462306 SNX4O95219 450 aa14.52□□□□□ -0.09
ERCC3-206ENST00000462306 C6orf47O95873 294 aa14.52□□□□□ -0.09
ERCC3-206ENST00000462306 IGHG3P01860 377 aa14.52□□□□□ -0.09
ERCC3-206ENST00000462306 CELA3AP09093 270 aa14.52□□□□□ -0.09
ERCC3-206ENST00000462306 RNF224P0DH78 156 aa14.52□□□□□ -0.09
ERCC3-206ENST00000462306 PTGDSP41222 190 aa14.52□□□□□ -0.09
ERCC3-206ENST00000462306 PRKAG1P54619 331 aa14.52□□□□□ -0.09
ERCC3-206ENST00000462306 WNT3P56703 355 aa14.52□□□□□ -0.09
ERCC3-206ENST00000462306 GAB1Q13480 694 aa14.52□□□□□ -0.09
ERCC3-206ENST00000462306 PGS1Q32NB8 556 aa14.52□□□□□ -0.09
ERCC3-206ENST00000462306 CYP27C1Q4G0S4 372 aa14.52□□□□□ -0.09
ERCC3-206ENST00000462306 SLC9B1Q4ZJI4 515 aa14.52□□□□□ -0.09
ERCC3-206ENST00000462306 EXOSC6Q5RKV6 272 aaKnown RBP14.52□□□□□ -0.09
ERCC3-206ENST00000462306 C1QL3Q5VWW1 255 aa14.52□□□□□ -0.09
ERCC3-206ENST00000462306 Q6ZPB1 254 aaPredicted RBP14.52□□□□□ -0.09
ERCC3-206ENST00000462306 SPATA19Q7Z5L4 167 aa14.52□□□□□ -0.09
ERCC3-206ENST00000462306 SPPL2CQ8IUH8 684 aa14.52□□□□□ -0.09
ERCC3-206ENST00000462306 FAM109AQ8N4B1 249 aa14.52□□□□□ -0.09
ERCC3-206ENST00000462306 OR8J2Q8NGG1 315 aa14.52□□□□□ -0.09
ERCC3-206ENST00000462306 CEP70Q8NHQ1 597 aa14.52□□□□□ -0.09
ERCC3-206ENST00000462306 ACTRT2Q8TDY3 377 aa14.52□□□□□ -0.09
ERCC3-206ENST00000462306 RELTQ969Z4 430 aa14.52□□□□□ -0.09
ERCC3-206ENST00000462306 TESCQ96BS2 214 aa14.52□□□□□ -0.09
ERCC3-206ENST00000462306 FAM120BQ96EK7 910 aaKnown RBP14.52□□□□□ -0.09
ERCC3-206ENST00000462306 ADOQ96SZ5 270 aa14.52□□□□□ -0.09
ERCC3-206ENST00000462306 DPY30Q9C005 99 aa14.52□□□□□ -0.09
ERCC3-206ENST00000462306 ZNF703Q9H7S9 590 aaPredicted RBP14.52□□□□□ -0.09
ERCC3-206ENST00000462306 C3orf14Q9HBI5 128 aa14.52□□□□□ -0.09
ERCC3-206ENST00000462306 EQTNQ9NQ60 294 aa14.52□□□□□ -0.09
ERCC3-206ENST00000462306 INTS9Q9NV88 658 aaKnown RBP14.52□□□□□ -0.09
ERCC3-206ENST00000462306 AIG1Q9NVV5 245 aa14.52□□□□□ -0.09
ERCC3-206ENST00000462306 OR10H1Q9Y4A9 318 aa14.52□□□□□ -0.09
ERCC3-206ENST00000462306 NINQ8N4C6 2090 aa14.51□□□□□ -0.09
ERCC3-206ENST00000462306 A0A1B0GTH9 108 aa14.51□□□□□ -0.09
ERCC3-206ENST00000462306 TTC36A6NLP5 189 aa14.51□□□□□ -0.09
ERCC3-206ENST00000462306 CDC40O60508 579 aaKnown RBP eCLIP14.51□□□□□ -0.09
ERCC3-206ENST00000462306 SCN2BO60939 215 aa14.51□□□□□ -0.09
ERCC3-206ENST00000462306 ICOSLGO75144 302 aa14.51□□□□□ -0.09
ERCC3-206ENST00000462306 PDE9AO76083 593 aa14.51□□□□□ -0.09
ERCC3-206ENST00000462306 LDLRP01130 860 aa14.51□□□□□ -0.09
ERCC3-206ENST00000462306 CA7P43166 264 aa14.51□□□□□ -0.09
ERCC3-206ENST00000462306 PNLIPRP2P54317 469 aa14.51□□□□□ -0.09
ERCC3-206ENST00000462306 PHC1P78364 1004 aa14.51□□□□□ -0.09
ERCC3-206ENST00000462306 ZNHIT3Q15649 155 aaPredicted RBP14.51□□□□□ -0.09
ERCC3-206ENST00000462306 LSM12Q3MHD2 195 aaKnown RBP14.51□□□□□ -0.09
ERCC3-206ENST00000462306 TMEM198Q66K66 360 aa14.51□□□□□ -0.09
ERCC3-206ENST00000462306 OR4F3Q6IEY1 312 aa14.51□□□□□ -0.09
ERCC3-206ENST00000462306 MFSD12Q6NUT3 480 aa14.51□□□□□ -0.09
ERCC3-206ENST00000462306 SLC30A6Q6NXT4 461 aa14.51□□□□□ -0.09
ERCC3-206ENST00000462306 RNF138Q8WVD3 245 aa14.51□□□□□ -0.09
ERCC3-206ENST00000462306 DYDC1Q8WWB3 177 aa14.51□□□□□ -0.09
ERCC3-206ENST00000462306 CKAP2Q8WWK9 683 aa14.51□□□□□ -0.09
ERCC3-206ENST00000462306 EFHD2Q96C19 240 aaPredicted RBP14.51□□□□□ -0.09
ERCC3-206ENST00000462306 TMCO6Q96DC7 493 aa14.51□□□□□ -0.09
ERCC3-206ENST00000462306 TMEM41AQ96HV5 264 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms