RNA–Protein interactions for RNA: ENST00000461873.5

LDB1-203, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 478 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-203ENST00000461873 YRDCQ86U90 279 aaKnown RBP8.11□□□□□ -1.11
LDB1-203ENST00000461873 CDH24Q86UP0 819 aa8.11□□□□□ -1.11
LDB1-203ENST00000461873 SLC44A2Q8IWA5 706 aaPredicted RBP8.11□□□□□ -1.11
LDB1-203ENST00000461873 DMRTC2Q8IXT2 367 aaPredicted RBP8.11□□□□□ -1.11
LDB1-203ENST00000461873 RPRMLQ8N4K4 120 aa8.11□□□□□ -1.11
LDB1-203ENST00000461873 PPP1R14CQ8TAE6 165 aa8.11□□□□□ -1.11
LDB1-203ENST00000461873 FAM76AQ8TAV0 307 aa8.11□□□□□ -1.11
LDB1-203ENST00000461873 CNRIP1Q96F85 164 aaPredicted RBP8.11□□□□□ -1.11
LDB1-203ENST00000461873 APIPQ96GX9 242 aa8.11□□□□□ -1.11
LDB1-203ENST00000461873 SFXN2Q96NB2 322 aa8.11□□□□□ -1.11
LDB1-203ENST00000461873 KCNA7Q96RP8 456 aa8.11□□□□□ -1.11
LDB1-203ENST00000461873 ADOQ96SZ5 270 aa8.11□□□□□ -1.11
LDB1-203ENST00000461873 TIMP4Q99727 224 aa8.11□□□□□ -1.11
LDB1-203ENST00000461873 EPB41L4BQ9H329 900 aa8.11□□□□□ -1.11
LDB1-203ENST00000461873 TAS2R10Q9NYW0 307 aa8.11□□□□□ -1.11
LDB1-203ENST00000461873 PPP4R1LQ9P1A2 415 aa8.11□□□□□ -1.11
LDB1-203ENST00000461873 SPRR3Q9UBC9 169 aa8.11□□□□□ -1.11
LDB1-203ENST00000461873 ZNF629Q9UEG4 869 aaPredicted RBP8.11□□□□□ -1.11
LDB1-203ENST00000461873 Q9UFV3 132 aa8.11□□□□□ -1.11
LDB1-203ENST00000461873 CES1P1Q9UKY3 287 aa8.11□□□□□ -1.11
LDB1-203ENST00000461873 EXO1Q9UQ84 846 aaKnown RBP8.11□□□□□ -1.11
LDB1-203ENST00000461873 SLC6A5Q9Y345 797 aa8.11□□□□□ -1.11
LDB1-203ENST00000461873 POLR3HQ9Y535 204 aaPredicted RBP8.11□□□□□ -1.11
LDB1-203ENST00000461873 HRH3Q9Y5N1 445 aa8.11□□□□□ -1.11
LDB1-203ENST00000461873 ARHGAP21Q5T5U3 1957 aa8.11□□□□□ -1.11
LDB1-203ENST00000461873 TEX15Q9BXT5 2789 aa8.1□□□□□ -1.11
LDB1-203ENST00000461873 A0A1B0GTL3 188 aa8.1□□□□□ -1.11
LDB1-203ENST00000461873 A0A1W2PPM1 405 aa8.1□□□□□ -1.11
LDB1-203ENST00000461873 C2orf72A6NCS6 295 aa8.1□□□□□ -1.11
LDB1-203ENST00000461873 LRRC3CA6NJW4 275 aa8.1□□□□□ -1.11
LDB1-203ENST00000461873 SNPHO15079 494 aa8.1□□□□□ -1.11
LDB1-203ENST00000461873 UGT2B11O75310 529 aa8.1□□□□□ -1.11
LDB1-203ENST00000461873 RSL1D1O76021 490 aaKnown RBP8.1□□□□□ -1.11
LDB1-203ENST00000461873 KCNH1O95259 989 aa8.1□□□□□ -1.11
LDB1-203ENST00000461873 CBX7O95931 251 aa8.1□□□□□ -1.11
LDB1-203ENST00000461873 SBK3P0C264 359 aa8.1□□□□□ -1.11
LDB1-203ENST00000461873 NEFHP12036 1026 aa8.1□□□□□ -1.11
LDB1-203ENST00000461873 CHN1P15882 459 aa8.1□□□□□ -1.11
LDB1-203ENST00000461873 BMP7P18075 431 aa8.1□□□□□ -1.11
LDB1-203ENST00000461873 MAPK1P28482 360 aa8.1□□□□□ -1.11
LDB1-203ENST00000461873 GCAP28676 217 aa8.1□□□□□ -1.11
LDB1-203ENST00000461873 ASCL1P50553 236 aa8.1□□□□□ -1.11
LDB1-203ENST00000461873 PNLIPRP2P54317 469 aa8.1□□□□□ -1.11
LDB1-203ENST00000461873 DIO3P55073 304 aa8.1□□□□□ -1.11
LDB1-203ENST00000461873 DNAJB13P59910 316 aa8.1□□□□□ -1.11
LDB1-203ENST00000461873 ACSF3Q4G176 576 aaPredicted RBP8.1□□□□□ -1.11
LDB1-203ENST00000461873 EIPR1Q53HC9 387 aa8.1□□□□□ -1.11
LDB1-203ENST00000461873 ZNF628Q5EBL2 1059 aa8.1□□□□□ -1.11
LDB1-203ENST00000461873 VASNQ6EMK4 673 aa8.1□□□□□ -1.11
LDB1-203ENST00000461873 GALNT18Q6P9A2 607 aa8.1□□□□□ -1.11
LDB1-203ENST00000461873 TMEM107Q6UX40 140 aa8.1□□□□□ -1.11
LDB1-203ENST00000461873 FRMD7Q6ZUT3 714 aa8.1□□□□□ -1.11
LDB1-203ENST00000461873 HDXQ7Z353 690 aa8.1□□□□□ -1.11
LDB1-203ENST00000461873 PLCZ1Q86YW0 608 aa8.1□□□□□ -1.11
LDB1-203ENST00000461873 DDIASQ8IXT1 998 aa8.1□□□□□ -1.11
LDB1-203ENST00000461873 MMP21Q8N119 569 aa8.1□□□□□ -1.11
LDB1-203ENST00000461873 TMEM151AQ8N4L1 468 aa8.1□□□□□ -1.11
LDB1-203ENST00000461873 FAM83FQ8NEG4 500 aaPredicted RBP8.1□□□□□ -1.11
LDB1-203ENST00000461873 CHMP6Q96FZ7 201 aa8.1□□□□□ -1.11
LDB1-203ENST00000461873 METTL2AQ96IZ6 378 aaKnown RBP8.1□□□□□ -1.11
LDB1-203ENST00000461873 TM9SF2Q99805 663 aa8.1□□□□□ -1.11
LDB1-203ENST00000461873 TRMOQ9BU70 441 aa8.1□□□□□ -1.11
LDB1-203ENST00000461873 TBL1XR1Q9BZK7 514 aa8.1□□□□□ -1.11
LDB1-203ENST00000461873 CALHM2Q9HA72 323 aa8.1□□□□□ -1.11
LDB1-203ENST00000461873 FOLH1BQ9HBA9 442 aa8.1□□□□□ -1.11
LDB1-203ENST00000461873 GALNT9Q9HCQ5 603 aa8.1□□□□□ -1.11
LDB1-203ENST00000461873 SERHLQ9NQF3 203 aa8.1□□□□□ -1.11
LDB1-203ENST00000461873 OXSMQ9NWU1 459 aa8.1□□□□□ -1.11
LDB1-203ENST00000461873 SH3BP4Q9P0V3 963 aa8.1□□□□□ -1.11
LDB1-203ENST00000461873 HEY2Q9UBP5 337 aa8.1□□□□□ -1.11
LDB1-203ENST00000461873 GPR55Q9Y2T6 319 aaPredicted RBP8.1□□□□□ -1.11
LDB1-203ENST00000461873 FAM215AQ9Y5M1 114 aa8.1□□□□□ -1.11
LDB1-203ENST00000461873 HCFC1P51610 2035 aa8.1□□□□□ -1.11
LDB1-203ENST00000461873 SERTM1A2A2V5 107 aa8.09□□□□□ -1.11
LDB1-203ENST00000461873 TUBAL3A6NHL2 446 aa8.09□□□□□ -1.11
LDB1-203ENST00000461873 TTC36A6NLP5 189 aa8.09□□□□□ -1.11
LDB1-203ENST00000461873 TMEM114B3SHH9 223 aa8.09□□□□□ -1.11
LDB1-203ENST00000461873 CASKO14936 926 aa8.09□□□□□ -1.11
LDB1-203ENST00000461873 AZIN1O14977 448 aa8.09□□□□□ -1.11
LDB1-203ENST00000461873 TO15178 435 aa8.09□□□□□ -1.11
LDB1-203ENST00000461873 PLOD3O60568 738 aa8.09□□□□□ -1.11
LDB1-203ENST00000461873 TRIM13O60858 407 aa8.09□□□□□ -1.11
LDB1-203ENST00000461873 PROCP04070 461 aa8.09□□□□□ -1.11
LDB1-203ENST00000461873 TMIGD3P0DMS9 266 aaPredicted RBP8.09□□□□□ -1.11
LDB1-203ENST00000461873 ENDOUP21128 410 aaKnown RBP8.09□□□□□ -1.11
LDB1-203ENST00000461873 S1PR1P21453 382 aa8.09□□□□□ -1.11
LDB1-203ENST00000461873 TCEA1P23193 301 aaKnown RBP8.09□□□□□ -1.11
LDB1-203ENST00000461873 CHMP24386 653 aa8.09□□□□□ -1.11
LDB1-203ENST00000461873 CTSSP25774 331 aa8.09□□□□□ -1.11
LDB1-203ENST00000461873 PTPN6P29350 595 aa8.09□□□□□ -1.11
LDB1-203ENST00000461873 SRD5A2P31213 254 aa8.09□□□□□ -1.11
LDB1-203ENST00000461873 RPL3P39023 403 aaKnown RBP8.09□□□□□ -1.11
LDB1-203ENST00000461873 EMDP50402 254 aa8.09□□□□□ -1.11
LDB1-203ENST00000461873 HTR6P50406 440 aa8.09□□□□□ -1.11
LDB1-203ENST00000461873 PRKAG1P54619 331 aa8.09□□□□□ -1.11
LDB1-203ENST00000461873 MANFP55145 182 aaKnown RBP8.09□□□□□ -1.11
LDB1-203ENST00000461873 CRYZQ08257 329 aaKnown RBP8.09□□□□□ -1.11
LDB1-203ENST00000461873 GAB1Q13480 694 aa8.09□□□□□ -1.11
LDB1-203ENST00000461873 CYP27C1Q4G0S4 372 aa8.09□□□□□ -1.11
LDB1-203ENST00000461873 NHSL2Q5HYW2 709 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms